SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1008001 9kci:B (2.9) BS01 CLR N/A GO:0001671 ... P54709 N/A
    1008002 9kci:C (2.9) BS01 CLR N/A GO:0016020 ... Q96DB9 N/A
    1008003 9kcj:A (3.1) BS01 ACP N/A GO:0000166 ... P05023 N/A
    1008004 9kcj:A (3.1) BS02 CLR N/A GO:0000166 ... P05023 N/A
    1008005 9kcj:A (3.1) BS03 CLR N/A GO:0000166 ... P05023 N/A
    1008006 9kcj:B (3.1) BS01 CLR N/A GO:0001671 ... P54709 N/A
    1008007 9kck:A (2.9) BS01 ALF N/A GO:0000166 ... P05023 N/A
    1008008 9kck:A (2.9) BS02 MG N/A GO:0000166 ... P05023 N/A
    1008009 9kck:A (2.9) BS03 CLR N/A GO:0000166 ... P05023 N/A
    1008010 9kck:B (2.9) BS01 CLR N/A GO:0001671 ... P54709 N/A
    1008011 9kcl:A (2.9) BS01 ACP N/A GO:0000166 ... P05023 N/A
    1008012 9kcm:A (2.9) BS01 ACP N/A GO:0000166 ... P05023 N/A
    1008013 9kco:G (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008014 9kco:H (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008015 9kco:I (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008016 9kco:J (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008017 9kco:K (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008018 9kco:M (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008019 9kco:N (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008020 9kco:O (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008021 9kco:P (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008022 9kco:Q (3.1) BS01 A1EFL N/A GO:0000122 ... P37840 N/A
    1008023 9kcq:A (1.77) BS01 dna N/A N/A N/A N/A
    1008024 9kd2:A (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008025 9kd2:B (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008026 9kd2:C (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008027 9kd2:D (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008028 9kd2:E (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008029 9kd2:F (3.1) BS01 NAD N/A N/A A0AAN3ACT3 N/A
    1008030 9kd4:A (1.64) BS01 peptide N/A GO:0042393 ... A0A1S3W9A1 40302551
    1008031 9kd4:B (1.64) BS01 peptide N/A GO:0042393 ... A0A1S3W9A1 40302551
    1008032 9kd5:A (1.8) BS01 peptide N/A GO:0000122 ... P61964 40302551
    1008033 9kd5:B (1.8) BS01 peptide N/A GO:0000122 ... P61964 40302551
    1008034 9kd7:A (3.09) BS01 peptide N/A GO:0001172 ... P04050 N/A
    1008035 9kd7:A (3.09) BS02 dna N/A GO:0001172 ... P04050 N/A
    1008036 9kd7:A (3.09) BS03 rna N/A GO:0001172 ... P04050 N/A
    1008037 9kd7:A (3.09) BS04 dna N/A GO:0001172 ... P04050 N/A
    1008038 9kd7:A (3.09) BS05 ZN N/A GO:0001172 ... P04050 N/A
    1008039 9kd7:A (3.09) BS06 ZN N/A GO:0001172 ... P04050 N/A
    1008040 9kd7:A (3.09) BS07 MG N/A GO:0001172 ... P04050 N/A
    1008041 9kd7:B (3.09) BS01 dna N/A GO:0001172 ... P08518 N/A
    1008042 9kd7:B (3.09) BS02 rna N/A GO:0001172 ... P08518 N/A
    1008043 9kd7:B (3.09) BS03 dna N/A GO:0001172 ... P08518 N/A
    1008044 9kd7:B (3.09) BS04 ZN N/A GO:0001172 ... P08518 N/A
    1008045 9kd7:C (3.09) BS01 ZN N/A GO:0000428 ... P16370 N/A
    1008046 9kd7:I (3.09) BS01 ZN N/A GO:0001172 ... P27999 N/A
    1008047 9kd7:I (3.09) BS02 ZN N/A GO:0001172 ... P27999 N/A
    1008048 9kd7:J (3.09) BS01 ZN N/A GO:0001172 ... P22139 N/A
    1008049 9kd7:L (3.09) BS01 ZN N/A GO:0001172 ... P40422 N/A
    1008050 9kd8:A (2.46) BS01 rna N/A GO:0001172 ... P04050 N/A
    1008051 9kd8:A (2.46) BS02 dna N/A GO:0001172 ... P04050 N/A
    1008052 9kd8:A (2.46) BS03 peptide N/A GO:0001172 ... P04050 N/A
    1008053 9kd8:A (2.46) BS04 ZN N/A GO:0001172 ... P04050 N/A
    1008054 9kd8:A (2.46) BS05 ZN N/A GO:0001172 ... P04050 N/A
    1008055 9kd8:A (2.46) BS06 MG N/A GO:0001172 ... P04050 N/A
    1008056 9kd8:B (2.46) BS01 rna N/A GO:0001172 ... P08518 N/A
    1008057 9kd8:B (2.46) BS02 dna N/A GO:0001172 ... P08518 N/A
    1008058 9kd8:B (2.46) BS03 ZN N/A GO:0001172 ... P08518 N/A
    1008059 9kd8:C (2.46) BS01 ZN N/A GO:0000428 ... P16370 N/A
    1008060 9kd8:I (2.46) BS01 ZN N/A GO:0001172 ... P27999 N/A
    1008061 9kd8:I (2.46) BS02 ZN N/A GO:0001172 ... P27999 N/A
    1008062 9kd8:J (2.46) BS01 ZN N/A GO:0001172 ... P22139 N/A
    1008063 9kd8:L (2.46) BS01 ZN N/A GO:0001172 ... P40422 N/A
    1008064 9kd9:A (2.88) BS01 dna N/A GO:0001172 ... P04050 N/A
    1008065 9kd9:A (2.88) BS02 rna N/A GO:0001172 ... P04050 N/A
    1008066 9kd9:A (2.88) BS03 dna N/A GO:0001172 ... P04050 N/A
    1008067 9kd9:A (2.88) BS04 ZN N/A GO:0001172 ... P04050 N/A
    1008068 9kd9:A (2.88) BS05 ZN N/A GO:0001172 ... P04050 N/A
    1008069 9kd9:A (2.88) BS06 MG N/A GO:0001172 ... P04050 N/A
    1008070 9kd9:B (2.88) BS01 rna N/A GO:0001172 ... P08518 N/A
    1008071 9kd9:B (2.88) BS02 dna N/A GO:0001172 ... P08518 N/A
    1008072 9kd9:B (2.88) BS03 ZN N/A GO:0001172 ... P08518 N/A
    1008073 9kd9:C (2.88) BS01 ZN N/A GO:0000428 ... P16370 N/A
    1008074 9kd9:I (2.88) BS01 ZN N/A GO:0001172 ... P27999 N/A
    1008075 9kd9:I (2.88) BS02 ZN N/A GO:0001172 ... P27999 N/A
    1008076 9kd9:J (2.88) BS01 ZN N/A GO:0001172 ... P22139 N/A
    1008077 9kd9:L (2.88) BS01 ZN N/A GO:0001172 ... P40422 N/A
    1008078 9kda:A (2.44) BS01 YG7 N/A GO:0003779 ... P23975 41138730
    1008079 9kda:A (2.44) BS02 CLR N/A GO:0003779 ... P23975 41138730
    1008080 9kda:A (2.44) BS03 CLR N/A GO:0003779 ... P23975 41138730
    1008081 9kda:A (2.44) BS04 CLR N/A GO:0003779 ... P23975 41138730
    1008082 9kda:A (2.44) BS05 CLR N/A GO:0003779 ... P23975 41138730
    1008083 9kda:A (2.44) BS06 CLR N/A GO:0003779 ... P23975 41138730
    1008084 9kda:A (2.44) BS07 CLR N/A GO:0003779 ... P23975 41138730
    1008085 9kda:A (2.44) BS08 CLR N/A GO:0003779 ... P23975 41138730
    1008086 9kda:A (2.44) BS09 A1EFM N/A GO:0003779 ... P23975 41138730
    1008087 9kda:A (2.44) BS10 CLR N/A GO:0003779 ... P23975 41138730
    1008088 9kda:A (2.44) BS11 CLR N/A GO:0003779 ... P23975 41138730
    1008089 9kda:B (2.44) BS01 CLR N/A GO:0003779 ... P23975 41138730
    1008090 9kda:B (2.44) BS02 CLR N/A GO:0003779 ... P23975 41138730
    1008091 9kda:B (2.44) BS03 YG7 N/A GO:0003779 ... P23975 41138730
    1008092 9kda:B (2.44) BS04 CLR N/A GO:0003779 ... P23975 41138730
    1008093 9kda:B (2.44) BS05 CLR N/A GO:0003779 ... P23975 41138730
    1008094 9kda:B (2.44) BS06 CLR N/A GO:0003779 ... P23975 41138730
    1008095 9kda:B (2.44) BS07 CLR N/A GO:0003779 ... P23975 41138730
    1008096 9kda:B (2.44) BS08 CLR N/A GO:0003779 ... P23975 41138730
    1008097 9kda:B (2.44) BS09 CLR N/A GO:0003779 ... P23975 41138730
    1008098 9kda:B (2.44) BS10 CLR N/A GO:0003779 ... P23975 41138730
    1008099 9kda:B (2.44) BS11 A1EFM N/A GO:0003779 ... P23975 41138730
    1008100 9kdb:A (2.67) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008101 9kdb:A (2.67) BS02 CA N/A GO:0005227 ... Q13507 41125595
    1008102 9kdb:A (2.67) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008103 9kdb:A (2.67) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008104 9kdb:A (2.67) BS05 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008105 9kdb:A (2.67) BS06 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008106 9kdb:B (2.67) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008107 9kdb:B (2.67) BS02 ZN N/A GO:0005227 ... Q13507 41125595
    1008108 9kdb:B (2.67) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008109 9kdb:B (2.67) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008110 9kdb:B (2.67) BS05 CA N/A GO:0005227 ... Q13507 41125595
    1008111 9kdb:B (2.67) BS06 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008112 9kdb:C (2.67) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008113 9kdb:C (2.67) BS02 ZN N/A GO:0005227 ... Q13507 41125595
    1008114 9kdb:C (2.67) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008115 9kdb:C (2.67) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008116 9kdb:C (2.67) BS05 CA N/A GO:0005227 ... Q13507 41125595
    1008117 9kdb:C (2.67) BS06 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008118 9kdb:D (2.67) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008119 9kdb:D (2.67) BS02 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008120 9kdb:D (2.67) BS03 ZN N/A GO:0005227 ... Q13507 41125595
    1008121 9kdb:D (2.67) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008122 9kdb:D (2.67) BS05 CA N/A GO:0005227 ... Q13507 41125595
    1008123 9kdb:D (2.67) BS06 CA N/A GO:0005227 ... Q13507 41125595
    1008124 9kdc:A (3.01) BS01 CA N/A GO:0005227 ... Q13507 41125595
    1008125 9kdc:A (3.01) BS02 CA N/A GO:0005227 ... Q13507 41125595
    1008126 9kdc:A (3.01) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008127 9kdc:A (3.01) BS04 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008128 9kdc:A (3.01) BS05 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008129 9kdc:B (3.01) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008130 9kdc:B (3.01) BS02 CA N/A GO:0005227 ... Q13507 41125595
    1008131 9kdc:B (3.01) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008132 9kdc:B (3.01) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008133 9kdc:B (3.01) BS05 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008134 9kdc:C (3.01) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008135 9kdc:C (3.01) BS02 CA N/A GO:0005227 ... Q13507 41125595
    1008136 9kdc:C (3.01) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008137 9kdc:C (3.01) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008138 9kdc:C (3.01) BS05 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008139 9kdc:D (3.01) BS01 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008140 9kdc:D (3.01) BS02 CA N/A GO:0005227 ... Q13507 41125595
    1008141 9kdc:D (3.01) BS03 CA N/A GO:0005227 ... Q13507 41125595
    1008142 9kdc:D (3.01) BS04 CA N/A GO:0005227 ... Q13507 41125595
    1008143 9kdc:D (3.01) BS05 A1L5I N/A GO:0005227 ... Q13507 41125595
    1008144 9kdd:A (2.7) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008145 9kdd:A (2.7) BS02 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008146 9kdd:A (2.7) BS03 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008147 9kdd:B (2.7) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008148 9kdd:B (2.7) BS02 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008149 9kdd:B (2.7) BS03 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008150 9kdd:C (2.7) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008151 9kdd:C (2.7) BS02 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008152 9kdd:C (2.7) BS03 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008153 9kdd:D (2.7) BS01 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008154 9kdd:D (2.7) BS02 ZN N/A GO:0005227 ... Q13507 41125595
    1008155 9kdd:D (2.7) BS03 A1L5P N/A GO:0005227 ... Q13507 41125595
    1008156 9kde:A (3.34) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008157 9kde:A (3.34) BS02 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008158 9kde:A (3.34) BS03 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008159 9kde:B (3.34) BS01 ZN N/A GO:0005227 ... Q13507 41125595
    1008160 9kde:B (3.34) BS02 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008161 9kde:B (3.34) BS03 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008162 9kde:C (3.34) BS01 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008163 9kde:C (3.34) BS02 ZN N/A GO:0005227 ... Q13507 41125595
    1008164 9kde:C (3.34) BS03 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008165 9kde:D (3.34) BS01 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008166 9kde:D (3.34) BS02 ZN N/A GO:0005227 ... Q13507 41125595
    1008167 9kde:D (3.34) BS03 A1L5Q N/A GO:0005227 ... Q13507 41125595
    1008168 9kdf:F (3.3) BS01 FK5 N/A GO:0003755 ... P68106 40263271
    1008169 9kdf:R (3.3) BS01 peptide N/A GO:0004930 ... N/A 40263271
    1008170 9kdf:R (3.3) BS02 CA N/A GO:0004930 ... N/A 40263271
    1008171 9kdf:R (3.3) BS03 CA N/A GO:0004930 ... N/A 40263271
    1008172 9kdf:R (3.3) BS04 CA N/A GO:0004930 ... N/A 40263271
    1008173 9kdf:R (3.3) BS05 CA N/A GO:0004930 ... N/A 40263271
    1008174 9kdf:R (3.3) BS06 FE N/A GO:0004930 ... N/A 40263271
    1008175 9kdf:R (3.3) BS07 ZN N/A GO:0004930 ... N/A 40263271
    1008176 9kdf:R (3.3) BS08 FK5 N/A GO:0004930 ... N/A 40263271
    1008177 9kdg:A (3.33) BS01 CA N/A GO:0004930 ... N/A 40263271
    1008178 9kdg:A (3.33) BS02 CA N/A GO:0004930 ... N/A 40263271
    1008179 9kdg:A (3.33) BS03 CA N/A GO:0004930 ... N/A 40263271
    1008180 9kdg:A (3.33) BS04 CA N/A GO:0004930 ... N/A 40263271
    1008181 9kdg:A (3.33) BS05 FE N/A GO:0004930 ... N/A 40263271
    1008182 9kdg:A (3.33) BS06 ZN N/A GO:0004930 ... N/A 40263271
    1008183 9kdg:A (3.33) BS07 FK5 N/A GO:0004930 ... N/A 40263271
    1008184 9kdg:F (3.33) BS01 FK5 N/A GO:0003755 ... P68106 40263271
    1008185 9kdh:A (2.52) BS01 CLR N/A GO:0003779 ... P23975 41138730
    1008186 9kdh:A (2.52) BS02 A1D5S N/A GO:0003779 ... P23975 41138730
    1008187 9kdh:A (2.52) BS03 CLR N/A GO:0003779 ... P23975 41138730
    1008188 9kdh:A (2.52) BS04 CLR N/A GO:0003779 ... P23975 41138730
    1008189 9kdh:A (2.52) BS05 CLR N/A GO:0003779 ... P23975 41138730
    1008190 9kdh:A (2.52) BS06 CLR N/A GO:0003779 ... P23975 41138730
    1008191 9kdh:A (2.52) BS07 CLR N/A GO:0003779 ... P23975 41138730
    1008192 9kdh:A (2.52) BS08 CLR N/A GO:0003779 ... P23975 41138730
    1008193 9kdh:A (2.52) BS09 A1EFM N/A GO:0003779 ... P23975 41138730
    1008194 9kdh:A (2.52) BS10 CLR N/A GO:0003779 ... P23975 41138730
    1008195 9kdh:A (2.52) BS11 CLR N/A GO:0003779 ... P23975 41138730
    1008196 9kdh:B (2.52) BS01 CLR N/A GO:0003779 ... P23975 41138730
    1008197 9kdh:B (2.52) BS02 CLR N/A GO:0003779 ... P23975 41138730
    1008198 9kdh:B (2.52) BS03 CLR N/A GO:0003779 ... P23975 41138730
    1008199 9kdh:B (2.52) BS04 CLR N/A GO:0003779 ... P23975 41138730
    1008200 9kdh:B (2.52) BS05 CLR N/A GO:0003779 ... P23975 41138730

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).