SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1008401 9kev:D (3.31) BS03 ZN N/A GO:0000287 ... P9WGY7 39948061
    1008402 9kev:D (3.31) BS04 ZN N/A GO:0000287 ... P9WGY7 39948061
    1008403 9kev:D (3.31) BS05 MG N/A GO:0000287 ... P9WGY7 39948061
    1008404 9kev:F (3.31) BS01 dna N/A GO:0000976 ... P9WGI1 39948061
    1008405 9kev:F (3.31) BS02 dna N/A GO:0000976 ... P9WGI1 39948061
    1008406 9kev:J (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008407 9kev:J (3.31) BS02 dna N/A GO:0000156 ... P71814 39948061
    1008408 9kev:K (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008409 9kev:L (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008410 9kev:L (3.31) BS02 dna N/A GO:0000156 ... P71814 39948061
    1008411 9kev:M (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008412 9kev:N (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008413 9kev:N (3.31) BS02 dna N/A GO:0000156 ... P71814 39948061
    1008414 9kev:O (3.31) BS01 dna N/A GO:0000156 ... P71814 39948061
    1008415 9kew:A (1.6) BS01 A1EFD N/A GO:0000413 ... Q13526 40803165
    1008416 9key:A (2.49) BS01 A1EFE N/A GO:0000413 ... Q13526 40803165
    1008417 9kez:A (1.95) BS01 DBJ N/A GO:0000413 ... Q13526 40803165
    1008418 9kf0:A (1.82) BS01 A1EFF N/A GO:0000413 ... Q13526 40803165
    1008419 9kf1:A (1.38) BS01 MG N/A N/A A0A6G3X8Q2 N/A
    1008420 9kf2:A (1.55) BS01 A3P N/A N/A A0A6G3X8Q2 N/A
    1008421 9kf4:A (1.93) BS01 MG N/A N/A D6N7U5 N/A
    1008422 9kf6:A (2.11) BS01 MG N/A N/A D6N7U5 N/A
    1008423 9kf6:A (2.11) BS02 MG N/A N/A D6N7U5 N/A
    1008424 9kfc:A (1.56) BS01 A1AYA N/A GO:0000413 ... Q13526 40803165
    1008425 9kfd:A (2.73) BS01 GTP N/A GO:0003924 ... P38297 41173874
    1008426 9kfd:A (2.73) BS02 MG N/A GO:0003924 ... P38297 41173874
    1008427 9kfd:B (2.73) BS01 GTP N/A GO:0003924 ... P38297 41173874
    1008428 9kfd:B (2.73) BS02 MG N/A GO:0003924 ... P38297 41173874
    1008429 9kfe:A (2.81) BS01 GTP N/A GO:0003924 ... P38297 41173874
    1008430 9kfe:A (2.81) BS02 MG N/A GO:0003924 ... P38297 41173874
    1008431 9kff:A (2.12) BS01 GDP N/A GO:0003924 ... P38297 41173874
    1008432 9kff:A (2.12) BS02 BEF N/A GO:0003924 ... P38297 41173874
    1008433 9kff:A (2.12) BS03 MG N/A GO:0003924 ... P38297 41173874
    1008434 9kfh:A (1.59) BS01 A1EFG N/A GO:0000413 ... Q13526 40803165
    1008435 9kfi:C (2.91) BS01 peptide N/A GO:0004930 ... Q9NSD7 40410443
    1008436 9kfi:C (2.91) BS02 peptide N/A GO:0004930 ... Q9NSD7 40410443
    1008437 9kfj:C (3.1) BS01 IYF N/A GO:0004930 ... Q9NSD7 40410443
    1008438 9kfk:R (2.95) BS01 peptide N/A GO:0004930 ... Q8TDU9 40410443
    1008439 9kfk:R (2.95) BS02 peptide N/A GO:0004930 ... Q8TDU9 40410443
    1008440 9kfl:A (3.45) BS01 peptide N/A GO:0003924 ... P01116 N/A
    1008441 9kfl:A (3.45) BS02 MG N/A GO:0003924 ... P01116 N/A
    1008442 9kfl:A (3.45) BS03 GDP N/A GO:0003924 ... P01116 N/A
    1008443 9kfl:D (3.45) BS01 MG N/A GO:0003924 ... P01116 N/A
    1008444 9kfl:D (3.45) BS02 GDP N/A GO:0003924 ... P01116 N/A
    1008445 9kfl:E (3.45) BS01 GDP N/A GO:0003924 ... P01116 N/A
    1008446 9kfl:H (3.45) BS01 GDP N/A GO:0003924 ... P01116 N/A
    1008447 9kfl:K (3.45) BS01 MG N/A GO:0003924 ... P01116 N/A
    1008448 9kfl:K (3.45) BS02 GDP N/A GO:0003924 ... P01116 N/A
    1008449 9kfm:A (1.8) BS01 peptide N/A GO:0000122 ... P61964 41689289
    1008450 9kfm:B (1.8) BS01 peptide N/A GO:0000122 ... P61964 41689289
    1008451 9kfn:B (2.8) BS01 peptide N/A GO:0000122 ... P61964 41689289
    1008452 9kfo:B (2.2) BS01 peptide N/A GO:0000122 ... P61964 41689289
    1008453 9kft:R (3.06) BS01 peptide N/A GO:0001664 ... P21462 N/A
    1008454 9kfu:A (1.4) BS01 A1L5T N/A GO:0004672 ... P22607 N/A
    1008455 9kfu:A (1.4) BS02 CO N/A GO:0004672 ... P22607 N/A
    1008456 9kfx:A (2.7) BS01 rna N/A GO:0003723 ... N/A N/A
    1008457 9kfx:A (2.7) BS02 ZN N/A GO:0003723 ... N/A N/A
    1008458 9kfx:A (2.7) BS03 ZN N/A GO:0003723 ... N/A N/A
    1008459 9kfx:B (2.7) BS01 rna N/A GO:0003723 ... N/A N/A
    1008460 9kfx:B (2.7) BS02 ZN N/A GO:0003723 ... N/A N/A
    1008461 9kfx:B (2.7) BS03 ZN N/A GO:0003723 ... N/A N/A
    1008462 9kfy:A (2.26) BS01 ZN N/A GO:0003723 ... N/A N/A
    1008463 9kfy:A (2.26) BS02 ZN N/A GO:0003723 ... N/A N/A
    1008464 9kfz:A (1.43) BS01 A1EFO N/A GO:0000413 ... Q13526 N/A
    1008465 9kfz:A (1.43) BS02 A1EFO N/A GO:0000413 ... Q13526 N/A
    1008466 9kfz:A (1.43) BS03 A1EFO N/A GO:0000413 ... Q13526 N/A
    1008467 9kfz:A (1.43) BS04 A1EFO N/A GO:0000413 ... Q13526 N/A
    1008468 9kg5:A (1.85) BS01 TES N/A GO:0004497 ... Q5YNS8 N/A
    1008469 9kg5:A (1.85) BS02 HEM N/A GO:0004497 ... Q5YNS8 N/A
    1008470 9kg5:B (1.85) BS01 TES N/A GO:0004497 ... Q5YNS8 N/A
    1008471 9kg5:B (1.85) BS02 HEM N/A GO:0004497 ... Q5YNS8 N/A
    1008472 9kg9:A (1.55) BS01 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008473 9kg9:A (1.55) BS02 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008474 9kg9:A (1.55) BS03 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008475 9kg9:A (1.55) BS04 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008476 9kg9:A (1.55) BS05 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008477 9kg9:A (1.55) BS06 A1EFP N/A GO:0000413 ... Q13526 40803165
    1008478 9kgi:A (3.2) BS01 GLA N/A GO:0030430 ... A0A067YMZ3 N/A
    1008479 9kgi:A (3.2) BS02 GLA N/A GO:0030430 ... A0A067YMZ3 N/A
    1008480 9kgi:B (3.2) BS01 GLA N/A GO:0030430 ... A0A067YMZ3 N/A
    1008481 9kgi:B (3.2) BS02 GLA N/A GO:0030430 ... A0A067YMZ3 N/A
    1008482 9kgj:A (1.37) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008483 9kgj:A (1.37) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008484 9kgj:B (1.37) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008485 9kgj:B (1.37) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008486 9kgl:A (2.88) BS01 ATP N/A GO:0005242 ... Q14654 N/A
    1008487 9kgl:A (2.88) BS02 ATP N/A GO:0005242 ... Q14654 N/A
    1008488 9kgl:B (2.88) BS01 GBM N/A GO:0005267 ... A0A1U7R319 N/A
    1008489 9kgl:B (2.88) BS02 ATP N/A GO:0005267 ... A0A1U7R319 N/A
    1008490 9kgl:C (2.88) BS01 ATP N/A GO:0005242 ... Q14654 N/A
    1008491 9kgl:C (2.88) BS02 ATP N/A GO:0005242 ... Q14654 N/A
    1008492 9kgl:D (2.88) BS01 GBM N/A GO:0005267 ... A0A1U7R319 N/A
    1008493 9kgl:D (2.88) BS02 ATP N/A GO:0005267 ... A0A1U7R319 N/A
    1008494 9kgl:E (2.88) BS01 ATP N/A GO:0005242 ... Q14654 N/A
    1008495 9kgl:E (2.88) BS02 ATP N/A GO:0005242 ... Q14654 N/A
    1008496 9kgl:F (2.88) BS01 GBM N/A GO:0005267 ... A0A1U7R319 N/A
    1008497 9kgl:F (2.88) BS02 ATP N/A GO:0005267 ... A0A1U7R319 N/A
    1008498 9kgl:G (2.88) BS01 ATP N/A GO:0005242 ... Q14654 N/A
    1008499 9kgl:G (2.88) BS02 ATP N/A GO:0005242 ... Q14654 N/A
    1008500 9kgl:H (2.88) BS01 GBM N/A GO:0005267 ... A0A1U7R319 N/A
    1008501 9kgl:H (2.88) BS02 ATP N/A GO:0005267 ... A0A1U7R319 N/A
    1008502 9kgm:A (2.89) BS01 CO N/A GO:0003868 ... Q6H4V1 N/A
    1008503 9kgm:A (2.89) BS02 92X N/A GO:0003868 ... Q6H4V1 N/A
    1008504 9kgm:B (2.89) BS01 CO N/A GO:0003868 ... Q6H4V1 N/A
    1008505 9kgm:B (2.89) BS02 92X N/A GO:0003868 ... Q6H4V1 N/A
    1008506 9kgn:A (1.89) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008507 9kgn:B (1.89) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008508 9kgo:A (1.62) BS01 A1EFQ N/A GO:0000413 ... Q13526 N/A
    1008509 9kgo:A (1.62) BS02 A1EFQ N/A GO:0000413 ... Q13526 N/A
    1008510 9kgo:A (1.62) BS03 A1EFQ N/A GO:0000413 ... Q13526 N/A
    1008511 9kgo:A (1.62) BS04 A1EFQ N/A GO:0000413 ... Q13526 N/A
    1008512 9kgp:A (1.52) BS01 HEM N/A GO:0004497 ... P14779 40107536
    1008513 9kgp:B (1.52) BS01 HEM N/A GO:0004497 ... P14779 40107536
    1008514 9kgq:A (1.5) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008515 9kgq:B (1.5) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008516 9kgr:A (1.47) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008517 9kgr:A (1.47) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008518 9kgr:B (1.47) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008519 9kgr:B (1.47) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008520 9kgs:A (2.2) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008521 9kgs:A (2.2) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008522 9kgs:B (2.2) BS01 peptide N/A GO:0008233 ... P0DTD1 40773370
    1008523 9kgs:B (2.2) BS02 A1L7M N/A GO:0008233 ... P0DTD1 40773370
    1008524 9kgt:A (3.05) BS01 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008525 9kgt:A (3.05) BS02 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008526 9kgt:A (3.05) BS03 A1L5V N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008527 9kgt:B (3.05) BS01 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008528 9kgt:B (3.05) BS02 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008529 9kgt:B (3.05) BS03 A1L5V N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008530 9kgt:C (3.05) BS01 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008531 9kgt:C (3.05) BS02 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008532 9kgt:C (3.05) BS03 A1L5V N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008533 9kgt:D (3.05) BS01 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008534 9kgt:D (3.05) BS02 dna N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008535 9kgt:D (3.05) BS03 A1L5V N/A GO:0003677 ... A6TE12
    A6TE19
    41291128
    1008536 9kh0:A (1.76) BS01 7YY N/A N/A P0DTD1 N/A
    1008537 9kh0:B (1.76) BS01 7YY N/A N/A P0DTD1 N/A
    1008538 9kh1:A (1.51) BS01 7YY N/A N/A P0DTD1 N/A
    1008539 9kh1:B (1.51) BS01 7YY N/A N/A P0DTD1 N/A
    1008540 9kh2:A (2.59) BS01 dna N/A N/A Q9HC78 N/A
    1008541 9kh2:A (2.59) BS02 dna N/A N/A Q9HC78 N/A
    1008542 9kh2:A (2.59) BS03 ZN N/A N/A Q9HC78 N/A
    1008543 9kh2:A (2.59) BS04 ZN N/A N/A Q9HC78 N/A
    1008544 9kh2:A (2.59) BS05 ZN N/A N/A Q9HC78 N/A
    1008545 9kh2:B (2.59) BS01 dna N/A N/A Q9HC78 N/A
    1008546 9kh2:B (2.59) BS02 dna N/A N/A Q9HC78 N/A
    1008547 9kh2:B (2.59) BS03 ZN N/A N/A Q9HC78 N/A
    1008548 9kh2:B (2.59) BS04 ZN N/A N/A Q9HC78 N/A
    1008549 9kh2:B (2.59) BS05 ZN N/A N/A Q9HC78 N/A
    1008550 9kh3:A (1.49) BS01 7YY N/A N/A P0DTD1 N/A
    1008551 9kh3:B (1.49) BS01 7YY N/A N/A P0DTD1 N/A
    1008552 9kh4:A (1.75) BS01 RNQ N/A GO:0030246 ... O00214 40780418
    1008553 9kh6:A (2.8) BS01 4BW N/A N/A N/A N/A
    1008554 9kh6:A (2.8) BS02 4BW N/A N/A N/A N/A
    1008555 9kh6:A (2.8) BS03 4BW N/A N/A N/A N/A
    1008556 9kh6:B (2.8) BS01 4BW N/A N/A N/A N/A
    1008557 9kh6:B (2.8) BS02 4BW N/A N/A N/A N/A
    1008558 9kh6:B (2.8) BS03 4BW N/A N/A N/A N/A
    1008559 9kh6:C (2.8) BS01 4BW N/A N/A N/A N/A
    1008560 9kh6:C (2.8) BS02 4BW N/A N/A N/A N/A
    1008561 9kh6:C (2.8) BS03 4BW N/A N/A N/A N/A
    1008562 9kh6:D (2.8) BS01 4BW N/A N/A N/A N/A
    1008563 9kh6:D (2.8) BS02 4BW N/A N/A N/A N/A
    1008564 9kh6:E (2.8) BS01 4BW N/A N/A N/A N/A
    1008565 9kh6:E (2.8) BS02 4BW N/A N/A N/A N/A
    1008566 9kh6:F (2.8) BS01 4BW N/A N/A N/A N/A
    1008567 9kh6:F (2.8) BS02 4BW N/A N/A N/A N/A
    1008568 9kh6:F (2.8) BS03 4BW N/A N/A N/A N/A
    1008569 9kh7:A (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008570 9kh7:A (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008571 9kh7:B (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008572 9kh7:B (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008573 9kh7:B (3.0) BS03 4BW N/A GO:0006629 ... N/A N/A
    1008574 9kh7:C (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008575 9kh7:C (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008576 9kh7:C (3.0) BS03 4BW N/A GO:0006629 ... N/A N/A
    1008577 9kh7:D (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008578 9kh7:D (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008579 9kh7:E (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008580 9kh7:E (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008581 9kh7:F (3.0) BS01 4BW N/A GO:0006629 ... N/A N/A
    1008582 9kh7:F (3.0) BS02 4BW N/A GO:0006629 ... N/A N/A
    1008583 9kh7:F (3.0) BS03 4BW N/A GO:0006629 ... N/A N/A
    1008584 9kh8:A (1.2) BS01 CO N/A GO:0004064 ... P00918 N/A
    1008585 9kh8:A (1.2) BS02 BCT N/A GO:0004064 ... P00918 N/A
    1008586 9khb:A (1.03) BS01 CA N/A GO:0007596 ... P02679 N/A
    1008587 9khc:A (1.32) BS01 peptide N/A GO:0007596 ... P02679 N/A
    1008588 9khc:A (1.32) BS02 CA N/A GO:0007596 ... P02679 N/A
    1008589 9khc:C (1.32) BS01 peptide N/A GO:0007596 ... P02679 N/A
    1008590 9khc:C (1.32) BS02 CA N/A GO:0007596 ... P02679 N/A
    1008591 9khi:B (2.7) BS01 CA N/A GO:0005216 ... Q9UL62 41372144
    1008592 9khi:B (2.7) BS02 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008593 9khi:B (2.7) BS03 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008594 9khi:B (2.7) BS04 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008595 9khi:C (2.7) BS01 CA N/A GO:0005216 ... Q9UL62 41372144
    1008596 9khi:C (2.7) BS02 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008597 9khi:C (2.7) BS03 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008598 9khi:C (2.7) BS04 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008599 9khi:C (2.7) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008600 9khi:D (2.7) BS01 CA N/A GO:0005216 ... Q9UL62 41372144

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).