SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1008601 9khi:D (2.7) BS02 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008602 9khi:D (2.7) BS03 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008603 9khi:D (2.7) BS04 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008604 9khi:D (2.7) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008605 9khj:A (2.62) BS01 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008606 9khj:A (2.62) BS02 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008607 9khj:A (2.62) BS03 CA N/A GO:0005216 ... Q9UL62 41372144
    1008608 9khj:A (2.62) BS04 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008609 9khj:A (2.62) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008610 9khj:B (2.62) BS01 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008611 9khj:B (2.62) BS02 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008612 9khj:B (2.62) BS03 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008613 9khj:B (2.62) BS04 CA N/A GO:0005216 ... Q9UL62 41372144
    1008614 9khj:B (2.62) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008615 9khj:C (2.62) BS01 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008616 9khj:C (2.62) BS02 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008617 9khj:C (2.62) BS03 CA N/A GO:0005216 ... Q9UL62 41372144
    1008618 9khj:C (2.62) BS04 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008619 9khj:C (2.62) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008620 9khj:D (2.62) BS01 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008621 9khj:D (2.62) BS02 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008622 9khj:D (2.62) BS03 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008623 9khj:D (2.62) BS04 CA N/A GO:0005216 ... Q9UL62 41372144
    1008624 9khj:D (2.62) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008625 9khk:A (2.9) BS01 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008626 9khk:A (2.9) BS02 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008627 9khk:A (2.9) BS03 CA N/A GO:0005216 ... Q9UL62 41372144
    1008628 9khk:A (2.9) BS04 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008629 9khk:A (2.9) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008630 9khk:B (2.9) BS01 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008631 9khk:B (2.9) BS02 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008632 9khk:B (2.9) BS03 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008633 9khk:B (2.9) BS04 CA N/A GO:0005216 ... Q9UL62 41372144
    1008634 9khk:B (2.9) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008635 9khk:C (2.9) BS01 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008636 9khk:C (2.9) BS02 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008637 9khk:C (2.9) BS03 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008638 9khk:C (2.9) BS04 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008639 9khk:C (2.9) BS05 CA N/A GO:0005216 ... Q9UL62 41372144
    1008640 9khk:D (2.9) BS01 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008641 9khk:D (2.9) BS02 Y01 N/A GO:0005216 ... Q9UL62 41372144
    1008642 9khk:D (2.9) BS03 ZN N/A GO:0005216 ... Q9UL62 41372144
    1008643 9khk:D (2.9) BS04 CA N/A GO:0005216 ... Q9UL62 41372144
    1008644 9khk:D (2.9) BS05 YZY N/A GO:0005216 ... Q9UL62 41372144
    1008645 9khn:A (2.0) BS01 PPG N/A GO:0004123 ... P32929 N/A
    1008646 9khn:A (2.0) BS02 PPG N/A GO:0004123 ... P32929 N/A
    1008647 9khn:B (2.0) BS01 PPG N/A GO:0004123 ... P32929 N/A
    1008648 9khn:B (2.0) BS02 PPG N/A GO:0004123 ... P32929 N/A
    1008649 9khn:C (2.0) BS01 PPG N/A GO:0004123 ... P32929 N/A
    1008650 9khn:C (2.0) BS02 PPG N/A GO:0004123 ... P32929 N/A
    1008651 9khn:D (2.0) BS01 PPG N/A GO:0004123 ... P32929 N/A
    1008652 9khn:D (2.0) BS02 PPG N/A GO:0004123 ... P32929 N/A
    1008653 9khp:A (1.73006) BS01 SAH N/A N/A A0A3R7FZU3 40761108
    1008654 9khp:A (1.73006) BS02 CYS N/A N/A A0A3R7FZU3 40761108
    1008655 9khu:A (2.2) BS01 UDP N/A N/A N/A N/A
    1008656 9khv:A (2.55) BS01 dna N/A N/A Q9KR72 39907109
    1008657 9khv:B (2.55) BS01 dna N/A N/A Q9KR72 39907109
    1008658 9khz:A (3.03) BS01 dna N/A N/A Q9KR72 39907109
    1008659 9khz:A (3.03) BS02 ADP N/A N/A Q9KR72 39907109
    1008660 9khz:B (3.03) BS01 dna N/A N/A Q9KR72 39907109
    1008661 9khz:B (3.03) BS02 ADP N/A N/A Q9KR72 39907109
    1008662 9ki0:A (2.65) BS01 dna N/A N/A Q9KR72 39907109
    1008663 9ki0:A (2.65) BS02 AGS N/A N/A Q9KR72 39907109
    1008664 9ki0:A (2.65) BS03 MG N/A N/A Q9KR72 39907109
    1008665 9ki0:B (2.65) BS01 dna N/A N/A Q9KR72 39907109
    1008666 9ki0:B (2.65) BS02 AGS N/A N/A Q9KR72 39907109
    1008667 9ki0:B (2.65) BS03 MG N/A N/A Q9KR72 39907109
    1008668 9ki1:G (3.3) BS01 peptide N/A GO:0030430 ... P08558 39992138
    1008669 9ki1:N (3.3) BS01 peptide N/A GO:0030430 ... P08558 39992138
    1008670 9ki1:U (3.3) BS01 peptide N/A GO:0030430 ... P08558 39992138
    1008671 9ki1:V (3.3) BS01 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008672 9ki1:V (3.3) BS02 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008673 9ki1:V (3.3) BS03 FE N/A GO:0030430 ... Q9T1V4 39992138
    1008674 9ki1:W (3.3) BS01 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008675 9ki1:W (3.3) BS02 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008676 9ki1:W (3.3) BS03 FE N/A GO:0030430 ... Q9T1V4 39992138
    1008677 9ki1:X (3.3) BS01 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008678 9ki1:X (3.3) BS02 peptide N/A GO:0030430 ... Q9T1V4 39992138
    1008679 9ki1:X (3.3) BS03 FE N/A GO:0030430 ... Q9T1V4 39992138
    1008680 9kj6:A (3.59) BS01 rna N/A GO:0003677 ... Q99ZW2 N/A
    1008681 9kj6:A (3.59) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1008682 9kj6:A (3.59) BS03 dna N/A GO:0003677 ... Q99ZW2 N/A
    1008683 9kjc:A (3.6) BS01 BLD N/A GO:0005515 ... Q9LJX0 40512840
    1008684 9kjg:B (1.91) BS01 A1L5X N/A N/A Q91XB0 41533589
    1008685 9kjh:B (1.8) BS01 A1L5X N/A N/A Q91XB0 41533589
    1008686 9kji:A (1.7) BS01 A1L5X N/A N/A Q91XB0 41533589
    1008687 9kjk:A (1.9) BS01 A1L5Z N/A N/A Q91XB0 41533589
    1008688 9kjl:B (1.7) BS01 A1L5Z N/A N/A Q91XB0 41533589
    1008689 9kjm:B (1.7) BS01 A1L5Z N/A N/A Q91XB0 41533589
    1008690 9kjn:B (1.7) BS01 A1L50 N/A N/A Q91XB0 41533589
    1008691 9kjo:A (2.0) BS01 A1L50 N/A N/A Q91XB0 41533589
    1008692 9kjp:B (1.9) BS01 A1L50 N/A N/A Q91XB0 41533589
    1008693 9kjq:A (1.8) BS01 A1L50 N/A N/A Q91XB0 41533589
    1008694 9kjs:B (1.7) BS01 A1L50 N/A N/A Q91XB0 41533589
    1008695 9kju:B (2.7) BS01 ARG N/A GO:0003333 ... Q9UM01 40106545
    1008696 9kjx:A (2.76) BS01 rna N/A GO:0003723 ... N/A 41330933
    1008697 9kjx:A (2.76) BS02 dna N/A GO:0003723 ... N/A 41330933
    1008698 9kjx:B (2.76) BS01 rna N/A GO:0005524 ... N/A 41330933
    1008699 9kjx:B (2.76) BS02 dna N/A GO:0005524 ... N/A 41330933
    1008700 9kjx:B (2.76) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008701 9kjx:B (2.76) BS04 ADP N/A GO:0005524 ... N/A 41330933
    1008702 9kjx:C (2.76) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008703 9kjx:C (2.76) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008704 9kjx:C (2.76) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008705 9kjx:D (2.76) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008706 9kjx:D (2.76) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008707 9kjx:E (2.76) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008708 9kjx:E (2.76) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008709 9kjx:F (2.76) BS01 ZN N/A N/A N/A 41330933
    1008710 9kjx:G (2.76) BS01 ZN N/A N/A N/A 41330933
    1008711 9kjy:A (2.61) BS01 rna N/A GO:0003723 ... N/A 41330933
    1008712 9kjy:A (2.61) BS02 dna N/A GO:0003723 ... N/A 41330933
    1008713 9kjy:B (2.61) BS01 rna N/A GO:0005524 ... N/A 41330933
    1008714 9kjy:B (2.61) BS02 dna N/A GO:0005524 ... N/A 41330933
    1008715 9kjy:B (2.61) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008716 9kjy:B (2.61) BS04 ADP N/A GO:0005524 ... N/A 41330933
    1008717 9kjy:C (2.61) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008718 9kjy:C (2.61) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008719 9kjy:C (2.61) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008720 9kjy:D (2.61) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008721 9kjy:D (2.61) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008722 9kjy:E (2.61) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008723 9kjy:E (2.61) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008724 9kjy:F (2.61) BS01 ZN N/A N/A N/A 41330933
    1008725 9kjy:G (2.61) BS01 ZN N/A N/A N/A 41330933
    1008726 9kjz:A (2.7) BS01 rna N/A GO:0003723 ... N/A 41330933
    1008727 9kjz:A (2.7) BS02 dna N/A GO:0003723 ... N/A 41330933
    1008728 9kjz:B (2.7) BS01 rna N/A GO:0005524 ... N/A 41330933
    1008729 9kjz:B (2.7) BS02 dna N/A GO:0005524 ... N/A 41330933
    1008730 9kjz:B (2.7) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008731 9kjz:B (2.7) BS04 ADP N/A GO:0005524 ... N/A 41330933
    1008732 9kjz:C (2.7) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008733 9kjz:C (2.7) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008734 9kjz:C (2.7) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008735 9kjz:D (2.7) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008736 9kjz:D (2.7) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008737 9kjz:E (2.7) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008738 9kjz:E (2.7) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008739 9kjz:F (2.7) BS01 ZN N/A N/A N/A 41330933
    1008740 9kjz:G (2.7) BS01 ZN N/A N/A N/A 41330933
    1008741 9kk1:A (2.71) BS01 rna N/A GO:0003723 ... N/A 41330933
    1008742 9kk1:A (2.71) BS02 dna N/A GO:0003723 ... N/A 41330933
    1008743 9kk1:B (2.71) BS01 rna N/A GO:0005524 ... N/A 41330933
    1008744 9kk1:B (2.71) BS02 dna N/A GO:0005524 ... N/A 41330933
    1008745 9kk1:B (2.71) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008746 9kk1:B (2.71) BS04 ADP N/A GO:0005524 ... N/A 41330933
    1008747 9kk1:C (2.71) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008748 9kk1:C (2.71) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008749 9kk1:C (2.71) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008750 9kk1:D (2.71) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008751 9kk1:D (2.71) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008752 9kk1:E (2.71) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008753 9kk1:E (2.71) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008754 9kk1:F (2.71) BS01 ZN N/A N/A N/A 41330933
    1008755 9kk1:G (2.71) BS01 ZN N/A N/A N/A 41330933
    1008756 9kk2:A (2.58) BS01 rna N/A GO:0003723 ... N/A 41330933
    1008757 9kk2:A (2.58) BS02 dna N/A GO:0003723 ... N/A 41330933
    1008758 9kk2:B (2.58) BS01 rna N/A GO:0005524 ... N/A 41330933
    1008759 9kk2:B (2.58) BS02 dna N/A GO:0005524 ... N/A 41330933
    1008760 9kk2:B (2.58) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008761 9kk2:B (2.58) BS04 ADP N/A GO:0005524 ... N/A 41330933
    1008762 9kk2:C (2.58) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008763 9kk2:C (2.58) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008764 9kk2:C (2.58) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008765 9kk2:D (2.58) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008766 9kk2:D (2.58) BS02 ADP N/A GO:0005524 ... N/A 41330933
    1008767 9kk2:E (2.58) BS01 dna N/A GO:0005524 ... N/A 41330933
    1008768 9kk2:E (2.58) BS02 rna N/A GO:0005524 ... N/A 41330933
    1008769 9kk2:E (2.58) BS03 ADP N/A GO:0005524 ... N/A 41330933
    1008770 9kk2:F (2.58) BS01 ZN N/A N/A N/A 41330933
    1008771 9kk2:G (2.58) BS01 ZN N/A N/A N/A 41330933
    1008772 9kk2:K (2.58) BS01 dna N/A GO:0003723 ... N/A 41330933
    1008773 9kk2:K (2.58) BS02 rna N/A GO:0003723 ... N/A 41330933
    1008774 9kk2:K (2.58) BS03 dna N/A GO:0003723 ... N/A 41330933
    1008775 9kk4:A (2.35) BS01 CA N/A GO:0004175 ... P00760 40132700
    1008776 9kk4:A (2.35) BS02 UEG N/A GO:0004175 ... P00760 40132700
    1008777 9kk5:A (2.0) BS01 PXL N/A GO:0004175 ... P00760 40132700
    1008778 9kk5:A (2.0) BS02 CA N/A GO:0004175 ... P00760 40132700
    1008779 9kk6:A (3.7) BS01 VO4 N/A GO:0005515 ... Q9LJX0 40512840
    1008780 9kk6:A (3.7) BS02 ADP N/A GO:0005515 ... Q9LJX0 40512840
    1008781 9kk6:A (3.7) BS03 ADP N/A GO:0005515 ... Q9LJX0 40512840
    1008782 9kk6:A (3.7) BS04 MG N/A GO:0005515 ... Q9LJX0 40512840
    1008783 9kk6:A (3.7) BS05 MG N/A GO:0005515 ... Q9LJX0 40512840
    1008784 9kk7:A (1.8) BS01 FDA N/A N/A B4G043 39913263
    1008785 9kk9:A (2.15) BS01 P7I N/A N/A N/A N/A
    1008786 9kk9:B (2.15) BS01 P7I N/A N/A N/A N/A
    1008787 9kk9:C (2.15) BS01 P7I N/A N/A N/A N/A
    1008788 9kka:A (1.883) BS01 PLP N/A N/A N/A N/A
    1008789 9kka:A (1.883) BS02 P7I N/A N/A N/A N/A
    1008790 9kka:B (1.883) BS01 PLP N/A N/A N/A N/A
    1008791 9kka:B (1.883) BS02 P7I N/A N/A N/A N/A
    1008792 9kkb:A (3.36) BS01 GTP N/A N/A N/A 41767953
    1008793 9kkc:A (1.8) BS01 FAD N/A N/A B4G043 39913263
    1008794 9kke:A (3.8) BS01 A1EFV N/A GO:0005515 ... Q9LJX0 40512840
    1008795 9kke:A (3.8) BS02 A1EFV N/A GO:0005515 ... Q9LJX0 40512840
    1008796 9kkf:3a (3.3) BS01 rna N/A GO:0001732 ... Q14152 41337487
    1008797 9kkf:3c (3.3) BS01 rna N/A GO:0001732 ... Q99613 41337487
    1008798 9kkf:SA (3.3) BS01 rna N/A GO:0000028 ... P08865 41337487
    1008799 9kkf:SB (3.3) BS01 rna N/A GO:0002181 ... P61247 41337487
    1008800 9kkf:SC (3.3) BS01 rna N/A GO:0002181 ... P15880 41337487

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).