SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1008801 9kkf:SD (3.3) BS01 rna N/A GO:0001228 ... P23396 41337487
    1008802 9kkf:SE (3.3) BS01 rna N/A GO:0002181 ... P62701 41337487
    1008803 9kkf:SF (3.3) BS01 rna N/A GO:0002181 ... P46782 41337487
    1008804 9kkf:SF (3.3) BS02 rna N/A GO:0002181 ... P46782 41337487
    1008805 9kkf:SG (3.3) BS01 rna N/A GO:0002181 ... P62753 41337487
    1008806 9kkf:SH (3.3) BS01 rna N/A GO:0002181 ... P62081 41337487
    1008807 9kkf:SI (3.3) BS01 rna N/A GO:0002181 ... P62241 41337487
    1008808 9kkf:SJ (3.3) BS01 rna N/A GO:0002181 ... P46781 41337487
    1008809 9kkf:SK (3.3) BS01 rna N/A GO:0002181 ... P46783 41337487
    1008810 9kkf:SL (3.3) BS01 rna N/A GO:0002181 ... P62280 41337487
    1008811 9kkf:SN (3.3) BS01 rna N/A GO:0000462 ... P62277 41337487
    1008812 9kkf:SO (3.3) BS01 rna N/A GO:0000028 ... P62263 41337487
    1008813 9kkf:SO (3.3) BS02 rna N/A GO:0000028 ... P62263 41337487
    1008814 9kkf:SP (3.3) BS01 rna N/A GO:0000056 ... P62841 41337487
    1008815 9kkf:SQ (3.3) BS01 rna N/A GO:0000462 ... P62249 41337487
    1008816 9kkf:SR (3.3) BS01 rna N/A GO:0002181 ... P08708 41337487
    1008817 9kkf:SS (3.3) BS01 rna N/A GO:0002181 ... P62269 41337487
    1008818 9kkf:ST (3.3) BS01 rna N/A GO:0000028 ... P39019 41337487
    1008819 9kkf:SU (3.3) BS01 rna N/A GO:0002181 ... P60866 41337487
    1008820 9kkf:SW (3.3) BS01 rna N/A GO:0002181 ... P62244 41337487
    1008821 9kkf:SX (3.3) BS01 rna N/A GO:0002181 ... P62266 41337487
    1008822 9kkf:SY (3.3) BS01 rna N/A GO:0002181 ... P62847 41337487
    1008823 9kkf:SZ (3.3) BS01 rna N/A GO:0002181 ... P62851 41337487
    1008824 9kkf:SZ (3.3) BS02 rna N/A GO:0002181 ... P62851 41337487
    1008825 9kkf:Sa (3.3) BS01 rna N/A GO:0002181 ... P62854 41337487
    1008826 9kkf:Sa (3.3) BS02 rna N/A GO:0002181 ... P62854 41337487
    1008827 9kkf:Sa (3.3) BS03 ZN N/A GO:0002181 ... P62854 41337487
    1008828 9kkf:Sb (3.3) BS01 rna N/A GO:0002181 ... P42677 41337487
    1008829 9kkf:Sb (3.3) BS02 rna N/A GO:0002181 ... P42677 41337487
    1008830 9kkf:Sc (3.3) BS01 rna N/A GO:0000028 ... P62857 41337487
    1008831 9kkf:Sc (3.3) BS02 rna N/A GO:0000028 ... P62857 41337487
    1008832 9kkf:Sd (3.3) BS01 rna N/A GO:0002181 ... P62273 41337487
    1008833 9kkf:Se (3.3) BS01 rna N/A N/A P62861 41337487
    1008834 9kkf:Sf (3.3) BS01 rna N/A GO:0002181 ... P25398 41337487
    1008835 9kkf:Sg (3.3) BS01 rna N/A GO:0001891 ... P63244 41337487
    1008836 9kkf:sh (3.3) BS01 rna N/A GO:0002181 ... P62979 41337487
    1008837 9kkg:A (1.15) BS01 FAD N/A GO:0016491 ... B4G043 39913263
    1008838 9kkh:A (1.1) BS01 FDA N/A GO:0016491 ... B4G043 39913263
    1008839 9kki:A (2.2) BS01 HEM N/A N/A A0A368UNN3 N/A
    1008840 9kki:B (2.2) BS01 HEM N/A N/A A0A368UNN3 N/A
    1008841 9kkl:A (3.6) BS01 FUC N/A GO:0030430 ... A0A067YMZ3 N/A
    1008842 9kkl:B (3.6) BS01 FUC N/A GO:0030430 ... A0A067YMZ3 N/A
    1008843 9kkm:A (4.14) BS01 ADP N/A GO:0000166 ... Q8EIJ9 N/A
    1008844 9kkm:B (4.14) BS01 ADP N/A GO:0000166 ... Q8EIJ9 N/A
    1008845 9kkp:A (1.6) BS01 A1L52 N/A GO:0005506 ... P02791 39973762
    1008846 9kkq:A (2.6) BS01 NA N/A GO:0000017 ... P31639 40759649
    1008847 9kkq:A (2.6) BS02 A1EFW N/A GO:0000017 ... P31639 40759649
    1008848 9kkt:A (2.01) BS01 MG N/A N/A A0A0H3C4T2 N/A
    1008849 9kkt:A (2.01) BS02 COI N/A N/A A0A0H3C4T2 N/A
    1008850 9kkt:B (2.01) BS01 MG N/A N/A A0A0H3C4T2 N/A
    1008851 9kkv:A (1.77) BS01 2HP N/A N/A A0A0H3C4T2 N/A
    1008852 9kkv:A (1.77) BS02 2HP N/A N/A A0A0H3C4T2 N/A
    1008853 9kkv:B (1.77) BS01 2HP N/A N/A A0A0H3C4T2 N/A
    1008854 9kkw:A (2.92) BS01 peptide N/A GO:0000017 ... P31639 40759649
    1008855 9kkx:A (2.8) BS01 GR2 N/A GO:0016787 ... A0A0M3PNA2 41271672
    1008856 9kky:A (2.81) BS01 dna N/A GO:0000978 ... O15527 40658017
    1008857 9kky:A (2.81) BS02 dna N/A GO:0000978 ... O15527 40658017
    1008858 9kky:A (2.81) BS03 CA N/A GO:0000978 ... O15527 40658017
    1008859 9kl4:A (2.32) BS01 A1L53 N/A GO:0004672 ... P00533 N/A
    1008860 9kl5:A (3.33) BS01 RTO N/A GO:0005452 ... Q4U2R8 40845848
    1008861 9kl6:A (1.45) BS01 NAP N/A GO:0004354 ... P78804 40578557
    1008862 9kl6:A (1.45) BS02 2IT N/A GO:0004354 ... P78804 40578557
    1008863 9kl8:A (2.48) BS01 dna N/A GO:0000978 ... O15527 40658017
    1008864 9kl8:A (2.48) BS02 dna N/A GO:0000978 ... O15527 40658017
    1008865 9kl8:A (2.48) BS03 CA N/A GO:0000978 ... O15527 40658017
    1008866 9kl8:A (2.48) BS04 CA N/A GO:0000978 ... O15527 40658017
    1008867 9kla:A (1.78) BS01 A1EF0 N/A N/A Q9H8M2 41477332
    1008868 9kla:A (1.78) BS02 A1EF0 N/A N/A Q9H8M2 41477332
    1008869 9klb:A (1.81) BS01 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008870 9klb:A (1.81) BS02 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008871 9klb:A (1.81) BS03 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008872 9klb:A (1.81) BS04 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008873 9klb:A (1.81) BS05 SFG N/A GO:0002039 ... Q96KQ7 40367677
    1008874 9klb:A (1.81) BS06 A1L57 N/A GO:0002039 ... Q96KQ7 40367677
    1008875 9klb:B (1.81) BS01 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008876 9klb:B (1.81) BS02 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008877 9klb:B (1.81) BS03 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008878 9klb:B (1.81) BS04 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008879 9klb:B (1.81) BS05 SFG N/A GO:0002039 ... Q96KQ7 40367677
    1008880 9klb:B (1.81) BS06 A1L57 N/A GO:0002039 ... Q96KQ7 40367677
    1008881 9klc:A (2.15) BS01 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008882 9klc:A (2.15) BS02 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008883 9klc:A (2.15) BS03 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008884 9klc:A (2.15) BS04 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008885 9klc:A (2.15) BS05 SFG N/A GO:0002039 ... Q96KQ7 40367677
    1008886 9klc:A (2.15) BS06 A1L58 N/A GO:0002039 ... Q96KQ7 40367677
    1008887 9klc:B (2.15) BS01 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008888 9klc:B (2.15) BS02 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008889 9klc:B (2.15) BS03 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008890 9klc:B (2.15) BS04 ZN N/A GO:0002039 ... Q96KQ7 40367677
    1008891 9klc:B (2.15) BS05 SFG N/A GO:0002039 ... Q96KQ7 40367677
    1008892 9klc:B (2.15) BS06 A1L58 N/A GO:0002039 ... Q96KQ7 40367677
    1008893 9kld:A (2.9) BS01 GR2 N/A GO:0016787 ... A0A0M3PNA2 41271672
    1008894 9kle:A (1.65) BS01 A1L52 N/A GO:0005506 ... P02791 39973762
    1008895 9klk:A (2.9) BS01 GR2 N/A GO:0016787 ... A0A0M3PNA2 41271672
    1008896 9klm:A (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008897 9klm:A (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008898 9klm:A (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008899 9klm:A (2.6) BS04 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008900 9klm:B (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008901 9klm:B (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008902 9klm:B (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008903 9klm:B (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008904 9klm:B (2.6) BS05 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008905 9klm:C (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008906 9klm:C (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008907 9klm:C (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008908 9klm:C (2.6) BS04 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008909 9klm:D (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008910 9klm:D (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008911 9klm:D (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008912 9klm:D (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008913 9klm:E (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008914 9klm:E (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008915 9klm:E (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008916 9klm:E (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008917 9klm:E (2.6) BS05 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008918 9klm:F (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008919 9klm:F (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008920 9klm:F (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008921 9klm:F (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008922 9klm:F (2.6) BS05 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008923 9klm:F (2.6) BS06 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008924 9klm:G (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008925 9klm:G (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008926 9klm:G (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008927 9klm:G (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008928 9klm:G (2.6) BS05 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008929 9klm:I (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008930 9klm:I (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008931 9klm:I (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008932 9klm:I (2.6) BS04 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008933 9klm:I (2.6) BS05 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008934 9klm:I (2.6) BS06 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008935 9klm:J (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008936 9klm:J (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008937 9klm:J (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008938 9klm:J (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008939 9klm:J (2.6) BS05 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008940 9klm:K (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008941 9klm:K (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008942 9klm:K (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008943 9klm:K (2.6) BS04 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008944 9klm:L (2.6) BS01 BCL N/A GO:0042717 ... P0C0Y8 N/A
    1008945 9klm:L (2.6) BS02 BPH N/A GO:0042717 ... P0C0Y8 N/A
    1008946 9klm:L (2.6) BS03 U10 N/A GO:0042717 ... P0C0Y8 N/A
    1008947 9klm:L (2.6) BS04 U10 N/A GO:0042717 ... P0C0Y8 N/A
    1008948 9klm:L (2.6) BS05 BCL N/A GO:0042717 ... P0C0Y8 N/A
    1008949 9klm:L (2.6) BS06 BCL N/A GO:0042717 ... P0C0Y8 N/A
    1008950 9klm:L (2.6) BS07 BPH N/A GO:0042717 ... P0C0Y8 N/A
    1008951 9klm:L (2.6) BS08 FE N/A GO:0042717 ... P0C0Y8 N/A
    1008952 9klm:L (2.6) BS09 U10 N/A GO:0042717 ... P0C0Y8 N/A
    1008953 9klm:M (2.6) BS01 BPH N/A GO:0042717 ... P0C0Y9 N/A
    1008954 9klm:M (2.6) BS02 U10 N/A GO:0042717 ... P0C0Y9 N/A
    1008955 9klm:M (2.6) BS03 BCL N/A GO:0042717 ... P0C0Y9 N/A
    1008956 9klm:M (2.6) BS04 BCL N/A GO:0042717 ... P0C0Y9 N/A
    1008957 9klm:M (2.6) BS05 BCL N/A GO:0042717 ... P0C0Y9 N/A
    1008958 9klm:M (2.6) BS06 BPH N/A GO:0042717 ... P0C0Y9 N/A
    1008959 9klm:M (2.6) BS07 FE N/A GO:0042717 ... P0C0Y9 N/A
    1008960 9klm:M (2.6) BS08 U10 N/A GO:0042717 ... P0C0Y9 N/A
    1008961 9klm:M (2.6) BS09 A1EF2 N/A GO:0042717 ... P0C0Y9 N/A
    1008962 9klm:N (2.6) BS01 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008963 9klm:N (2.6) BS02 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008964 9klm:N (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008965 9klm:N (2.6) BS04 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008966 9klm:N (2.6) BS05 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008967 9klm:O (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008968 9klm:O (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008969 9klm:O (2.6) BS03 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008970 9klm:O (2.6) BS04 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008971 9klm:P (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008972 9klm:P (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008973 9klm:P (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008974 9klm:Q (2.6) BS01 A1EF2 N/A GO:0005886 ... P0C0X9 N/A
    1008975 9klm:Q (2.6) BS02 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008976 9klm:Q (2.6) BS03 BCL N/A GO:0005886 ... P0C0X9 N/A
    1008977 9klm:X (2.6) BS01 BCL N/A N/A Q7B2Z6 N/A
    1008978 9klm:X (2.6) BS02 A1EF2 N/A N/A Q7B2Z6 N/A
    1008979 9klm:a (2.6) BS01 BCL N/A GO:0005886 ... Q7B300 N/A
    1008980 9klm:a (2.6) BS02 BCL N/A GO:0005886 ... Q7B300 N/A
    1008981 9klm:a (2.6) BS03 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008982 9klm:b (2.6) BS01 BCL N/A GO:0005886 ... Q7B300 N/A
    1008983 9klm:b (2.6) BS02 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008984 9klm:b (2.6) BS03 BCL N/A GO:0005886 ... Q7B300 N/A
    1008985 9klm:b (2.6) BS04 BCL N/A GO:0005886 ... Q7B300 N/A
    1008986 9klm:c (2.6) BS01 BCL N/A GO:0005886 ... Q7B300 N/A
    1008987 9klm:c (2.6) BS02 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008988 9klm:c (2.6) BS03 BCL N/A GO:0005886 ... Q7B300 N/A
    1008989 9klm:c (2.6) BS04 BCL N/A GO:0005886 ... Q7B300 N/A
    1008990 9klm:d (2.6) BS01 BCL N/A GO:0005886 ... Q7B300 N/A
    1008991 9klm:d (2.6) BS02 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008992 9klm:d (2.6) BS03 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008993 9klm:d (2.6) BS04 BCL N/A GO:0005886 ... Q7B300 N/A
    1008994 9klm:e (2.6) BS01 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008995 9klm:e (2.6) BS02 BCL N/A GO:0005886 ... Q7B300 N/A
    1008996 9klm:e (2.6) BS03 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008997 9klm:e (2.6) BS04 BCL N/A GO:0005886 ... Q7B300 N/A
    1008998 9klm:f (2.6) BS01 A1EF2 N/A GO:0005886 ... Q7B300 N/A
    1008999 9klm:f (2.6) BS02 BCL N/A GO:0005886 ... Q7B300 N/A
    1009000 9klm:f (2.6) BS03 A1EF2 N/A GO:0005886 ... Q7B300 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).