SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    101001 2ppe:A (1.75) BS01 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101002 2ppe:A (1.75) BS02 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101003 2ppe:B (1.75) BS01 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101004 2ppe:B (1.75) BS02 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101005 2ppe:C (1.75) BS01 NO 1.7.2.1 GO:0005507 ... P38501 17924665
    101006 2ppe:C (1.75) BS02 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101007 2ppe:C (1.75) BS03 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101008 2ppf:A (1.65) BS01 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101009 2ppf:A (1.65) BS02 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101010 2ppf:B (1.65) BS01 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101011 2ppf:B (1.65) BS02 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101012 2ppf:B (1.65) BS03 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101013 2ppf:C (1.65) BS01 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101014 2ppf:C (1.65) BS02 CU 1.7.2.1 GO:0005507 ... P38501 17924665
    101015 2ppf:C (1.65) BS03 CU1 1.7.2.1 GO:0005507 ... P38501 17924665
    101016 2ppf:C (1.65) BS04 NO 1.7.2.1 GO:0005507 ... P38501 17924665
    101017 2ppl:A (2.2) BS01 CA 3.1.1.3 GO:0004465 ... P54315 N/A
    101018 2ppl:A (2.2) BS02 CA 3.1.1.3 GO:0004465 ... P54315 N/A
    101019 2ppl:A (2.2) BS03 CA 3.1.1.3 GO:0004465 ... P54315 N/A
    101020 2pps:A (4.0) BS01 CLA N/A N/A N/A 8901876
    101021 2pps:A (4.0) BS02 CLA N/A N/A N/A 8901876
    101022 2pps:B (4.0) BS01 SF4 N/A N/A N/A 8901876
    101023 2pps:B (4.0) BS02 CLA N/A N/A N/A 8901876
    101024 2pps:C (4.0) BS01 SF4 N/A N/A N/A 8901876
    101025 2pps:C (4.0) BS02 SF4 N/A N/A N/A 8901876
    101026 2ppt:A (1.92) BS01 ZN N/A N/A N/A N/A
    101027 2ppt:B (1.92) BS01 ZN N/A N/A N/A N/A
    101028 2ppt:B (1.92) BS02 ZN N/A N/A N/A N/A
    101029 2pq2:A (1.82) BS01 peptide 3.4.21.64 GO:0004252 ... P06873 N/A
    101030 2pq2:A (1.82) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    101031 2pq3:A (1.3) BS01 ZN ? GO:0005509 ... P0DP29 17942116
    101032 2pq3:A (1.3) BS02 ZN ? GO:0005509 ... P0DP29 17942116
    101033 2pq7:A (1.45) BS01 FE ? N/A Q1EM40 N/A
    101034 2pq7:A (1.45) BS02 FE ? N/A Q1EM40 N/A
    101035 2pq8:A (1.45) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 N/A
    101036 2pq8:A (1.45) BS02 COA 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 N/A
    101037 2pq9:A (1.6) BS01 GG9 2.5.1.19 GO:0003824 ... P0A6D3 17958399 MOAD: Ki=7.8nM
    101038 2pqb:A (1.8) BS01 GG9 2.5.1.19 GO:0003824 ... Q9R4E4 17958399 MOAD: Ki=63nM
    101039 2pqc:A (1.6) BS01 RC1 2.5.1.19 GO:0003824 ... Q9R4E4 17958399 MOAD: Ki=1800nM
    101040 2pqd:A (1.77) BS01 GG9 2.5.1.19 GO:0003824 ... Q9R4E4 17958399
    101041 2pqf:A (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101042 2pqf:B (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101043 2pqf:C (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101044 2pqf:D (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101045 2pqf:E (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101046 2pqf:F (2.2) BS01 GAB 2.4.2.- GO:0003950 ... Q9H0J9 25635049
    101047 2pqj:A (2.8) BS01 ADE 3.2.2.22 GO:0017148 ... P25891 17855394
    101048 2pqj:B (2.8) BS01 ADE 3.2.2.22 GO:0017148 ... P25891 17855394
    101049 2pqj:C (2.8) BS01 ADE 3.2.2.22 GO:0017148 ... P25891 17855394
    101050 2pqk:A (2.0) BS01 peptide ? GO:0042981 ... Q07820 20066663
    101051 2pqk:A (2.0) BS02 ZN ? GO:0042981 ... Q07820 20066663
    101052 2pql:A (2.2) BS01 TSS ? GO:0005549 ... Q7PNF2 17928288 MOAD: Kd=53nM
    101053 2pqm:A (1.86) BS01 PLP ? GO:0003824 ... O15570 18350570
    101054 2pqm:B (1.86) BS01 PLP ? GO:0003824 ... O15570 18350570
    101055 2pqn:A (2.15) BS01 peptide ? GO:0000266 ... P40515 17998537
    101056 2pqu:A (2.12) BS01 dna ? GO:0003676 ... Q15366 17526645
    101057 2pqu:B (2.12) BS01 dna ? GO:0003676 ... Q15366 17526645
    101058 2pqu:C (2.12) BS01 dna ? GO:0003676 ... Q15366 17526645
    101059 2pqw:A (2.0) BS01 peptide ? GO:0005634 ... Q9Y468 18026117
    101060 2pqx:A (1.42) BS01 CA 4.6.1.21 GO:0003723 ... P21338 N/A
    101061 2pqy:A (2.3) BS01 CA 4.6.1.21 GO:0003723 ... P21338 17702751
    101062 2pqz:A (1.55) BS01 G0G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 18348517 MOAD: Ki=2.15uM
    101063 2pqz:B (1.55) BS01 G0G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 18348517
    101064 2pr1:A (3.2) BS01 GLC 2.3.1.- GO:0016747 ... O34468 N/A
    101065 2pr1:A (3.2) BS02 COA 2.3.1.- GO:0016747 ... O34468 N/A
    101066 2pr1:B (3.2) BS01 GLC 2.3.1.- GO:0016747 ... O34468 N/A
    101067 2pr1:B (3.2) BS02 CO 2.3.1.- GO:0016747 ... O34468 N/A
    101068 2pr1:B (3.2) BS03 COA 2.3.1.- GO:0016747 ... O34468 N/A
    101069 2pr2:A (2.5) BS01 DG1 1.3.1.9 GO:0004318 ... P9WGR1 17636923 MOAD: Ki=130nM
    101070 2pr3:A (1.5) BS01 CA 3.4.21.6 GO:0004252 ... P00742 17581239
    101071 2pr3:A (1.5) BS02 CA 3.4.21.6 GO:0004252 ... P00742 17581239
    101072 2pr3:A (1.5) BS03 237 3.4.21.6 GO:0004252 ... P00742 17581239 MOAD: ic50=0.16nM
    BindingDB: IC50=0.16nM
    101073 2pr5:A (1.45) BS01 FMN ? N/A O34627 17764689
    101074 2pr5:B (1.45) BS01 FMN ? N/A O34627 17764689
    101075 2pr6:A (1.95) BS01 FMN ? N/A O34627 17764689
    101076 2pr6:B (1.95) BS01 FMN ? N/A O34627 17764689
    101077 2pr7:A (1.44) BS01 CA N/A N/A N/A N/A
    101078 2pr7:B (1.44) BS01 CA N/A N/A N/A N/A
    101079 2pr9:A (2.51) BS01 peptide ? GO:0005975 ... P84092 18305175
    101080 2prb:A (1.8) BS01 COA 2.3.1.82 GO:0016410 ... Q8GLI5 18292754
    101081 2prc:C (2.45) BS01 HEM ? GO:0005506 ... P07173 9351808
    101082 2prc:C (2.45) BS02 HEM ? GO:0005506 ... P07173 9351808
    101083 2prc:C (2.45) BS03 HEM ? GO:0005506 ... P07173 9351808
    101084 2prc:C (2.45) BS04 HEM ? GO:0005506 ... P07173 9351808
    101085 2prc:L (2.45) BS01 BCB ? GO:0009772 ... P06009 9351808
    101086 2prc:L (2.45) BS02 BCB ? GO:0009772 ... P06009 9351808
    101087 2prc:L (2.45) BS03 BPB ? GO:0009772 ... P06009 9351808
    101088 2prc:L (2.45) BS04 UQ2 ? GO:0009772 ... P06009 9351808
    101089 2prc:L (2.45) BS05 FE2 ? GO:0009772 ... P06009 9351808
    101090 2prc:L (2.45) BS06 BCB ? GO:0009772 ... P06009 9351808
    101091 2prc:L (2.45) BS07 BPB ? GO:0009772 ... P06009 9351808
    101092 2prc:L (2.45) BS08 MQ7 ? GO:0009772 ... P06009 9351808
    101093 2prc:M (2.45) BS01 BCB ? GO:0009772 ... P06010 9351808
    101094 2prc:M (2.45) BS02 BPB ? GO:0009772 ... P06010 9351808
    101095 2prc:M (2.45) BS03 FE2 ? GO:0009772 ... P06010 9351808
    101096 2prc:M (2.45) BS04 BCB ? GO:0009772 ... P06010 9351808
    101097 2prc:M (2.45) BS05 BCB ? GO:0009772 ... P06010 9351808
    101098 2prc:M (2.45) BS06 BPB ? GO:0009772 ... P06010 9351808
    101099 2prc:M (2.45) BS07 MQ7 ? GO:0009772 ... P06010 9351808
    101100 2prc:M (2.45) BS08 NS5 ? GO:0009772 ... P06010 9351808
    101101 2pre:A (2.7) BS01 E64 3.4.22.- GO:0006508 ... A8DS38 18167146
    101102 2pre:B (2.7) BS01 E64 3.4.22.- GO:0006508 ... A8DS38 18167146
    101103 2prg:A (2.3) BS01 BRL ? GO:0003677 ... P37231 9744270 BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    101104 2prg:B (2.3) BS01 BRL ? GO:0003677 ... P37231 9744270 BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    101105 2prh:A (2.4) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 18672895
    101106 2prh:A (2.4) BS02 238 1.3.5.2 GO:0004152 ... Q02127 18672895 MOAD: ic50=15nM
    101107 2pri:A (2.3) BS01 D6G 2.4.1.1 GO:0004645 ... P00489 7500360 MOAD: Ki=1.23mM
    101108 2pri:A (2.3) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 7500360
    101109 2prj:A (2.3) BS01 NBG 2.4.1.1 GO:0004645 ... P00489 8580837 MOAD: Ki=32uM
    BindingDB: Ki=32000nM
    101110 2prj:A (2.3) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 8580837
    101111 2prj:A (2.3) BS03 IMP 2.4.1.1 GO:0004645 ... P00489 8580837
    101112 2prk:A (1.5) BS01 CA 3.4.21.64 GO:0004252 ... P06873 3271105
    101113 2prk:A (1.5) BS02 CA 3.4.21.64 GO:0004252 ... P06873 3271105
    101114 2prl:A (2.1) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 18672895
    101115 2prl:A (2.1) BS02 R2C 1.3.5.2 GO:0004152 ... Q02127 18672895 MOAD: ic50=81nM
    101116 2prm:A (3.0) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 18672895
    101117 2prn:A (1.93) BS01 MG ? GO:0009279 ... P39767 9684893
    101118 2prn:A (1.93) BS02 C8E ? GO:0009279 ... P39767 9684893
    101119 2prn:A (1.93) BS03 C8E ? GO:0009279 ... P39767 9684893
    101120 2prq:A (2.15) BS01 CO 3.4.11.10 GO:0006508 ... Q01693 17574677
    101121 2prq:A (2.15) BS02 CO 3.4.11.10 GO:0006508 ... Q01693 17574677
    101122 2prs:A (1.7) BS01 ZN ? GO:0006829 ... P39172 18027003
    101123 2prs:B (1.7) BS01 ZN ? GO:0006829 ... P39172 18027003
    101124 2prt:A (3.15) BS01 dna ? N/A P19544 17716689
    101125 2prt:A (3.15) BS02 dna ? N/A P19544 17716689
    101126 2prt:A (3.15) BS03 ZN ? N/A P19544 17716689
    101127 2prt:A (3.15) BS04 ZN ? N/A P19544 17716689
    101128 2prt:A (3.15) BS05 ZN ? N/A P19544 17716689
    101129 2prt:A (3.15) BS06 ZN ? N/A P19544 17716689
    101130 2prz:A (1.895) BS01 OMP 2.4.2.10 GO:0004588 ... P13298 18020427
    101131 2prz:B (1.895) BS01 OMP 2.4.2.10 GO:0004588 ... P13298 18020427
    101132 2prz:C (1.895) BS01 OMP 2.4.2.10 GO:0004588 ... P13298 18020427
    101133 2prz:D (1.895) BS01 OMP 2.4.2.10 GO:0004588 ... P13298 18020427
    101134 2ps0:A (2.0) BS01 ZN ? GO:0006829 ... P39172 18027003
    101135 2ps0:B (2.0) BS01 ZN ? GO:0006829 ... P39172 18027003
    101136 2ps1:A (1.75) BS01 ORO 2.4.2.10 GO:0004588 ... P13298 18020427
    101137 2ps1:A (1.75) BS02 PRP 2.4.2.10 GO:0004588 ... P13298 18020427
    101138 2ps1:A (1.75) BS03 PRP 2.4.2.10 GO:0004588 ... P13298 18020427
    101139 2ps1:B (1.75) BS01 PRP 2.4.2.10 GO:0004588 ... P13298 18020427
    101140 2ps1:B (1.75) BS02 ORO 2.4.2.10 GO:0004588 ... P13298 18020427
    101141 2ps1:B (1.75) BS03 PRP 2.4.2.10 GO:0004588 ... P13298 18020427
    101142 2ps2:A (1.8) BS01 MG ? GO:0003824 ... Q2U1E8 N/A
    101143 2ps2:B (1.8) BS01 MG ? GO:0003824 ... Q2U1E8 N/A
    101144 2ps2:C (1.8) BS01 MG ? GO:0003824 ... Q2U1E8 N/A
    101145 2ps2:D (1.8) BS01 MG ? GO:0003824 ... Q2U1E8 N/A
    101146 2ps4:A (2.46) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101147 2ps4:B (2.46) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101148 2ps5:B (2.1) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101149 2ps5:B (2.1) BS02 POP 4.2.3.6 GO:0016106 ... P13513 17996718
    101150 2ps7:A (2.35) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101151 2ps7:B (2.35) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101152 2ps8:B (2.67) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101153 2ps8:B (2.67) BS02 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    101154 2ps8:B (2.67) BS03 POP 4.2.3.6 GO:0016106 ... P13513 17996718
    101155 2ps9:A (2.15) BS01 CO ? GO:0006829 ... P39172 18027003
    101156 2ps9:B (2.15) BS01 CO ? GO:0006829 ... P39172 18027003
    101157 2psj:A (1.8) BS01 CEI 1.13.12.5 GO:0003824 ... P27652 17980388 MOAD: Ki~20nM
    101158 2psj:B (1.8) BS01 CEI 1.13.12.5 GO:0003824 ... P27652 17980388 MOAD: Ki~20nM
    101159 2psn:A (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    101160 2psn:B (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    101161 2psn:C (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    101162 2psn:D (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    101163 2psr:A (2.05) BS01 CA ? GO:0000302 ... P31151 10026247
    101164 2psr:A (2.05) BS02 ZN ? GO:0000302 ... P31151 10026247
    101165 2psu:A (1.93) BS01 MUU ? GO:0004190 ... O38723 17539822 MOAD: Ki=24nM
    101166 2psu:B (1.93) BS01 MUU ? GO:0004190 ... O38723 17539822
    101167 2psv:A (1.75) BS01 MUV ? GO:0004190 ... O38707 17539822 MOAD: Ki=58nM
    101168 2psv:B (1.75) BS01 MUV ? GO:0004190 ... O38707 17539822
    101169 2psw:A (2.1) BS01 COA 2.3.1.-
    2.3.1.258
    GO:0004596 ... Q9GZZ1 N/A BindingDB: Kd=156nM
    101170 2psw:B (2.1) BS01 COA 2.3.1.-
    2.3.1.258
    GO:0004596 ... Q9GZZ1 N/A BindingDB: Kd=156nM
    101171 2psw:C (2.1) BS01 COA 2.3.1.-
    2.3.1.258
    GO:0004596 ... Q9GZZ1 N/A BindingDB: Kd=156nM
    101172 2psx:A (2.3) BS01 peptide 3.4.21.- GO:0004252 ... Q9Y337 17881000
    101173 2psy:A (2.3) BS01 peptide 3.4.21.- GO:0004252 ... Q9Y337 17881000
    101174 2psy:A (2.3) BS02 ZN 3.4.21.- GO:0004252 ... Q9Y337 17881000
    101175 2psy:A (2.3) BS03 ZN 3.4.21.- GO:0004252 ... Q9Y337 17881000
    101176 2pt2:A (2.0) BS01 FE2 ? GO:0005886 ... P72827 17626019
    101177 2pt3:A (2.34) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    101178 2pt3:A (2.34) BS02 HEM 1.11.1.7 GO:0004601 ... P80025 N/A
    101179 2pt6:A (2.0) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101180 2pt6:B (2.0) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101181 2pt6:C (2.0) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101182 2pt9:A (2.2) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101183 2pt9:A (2.2) BS02 2MH 2.5.1.16 GO:0003824 ... Q8II73 17822713 MOAD: ic50=35uM
    101184 2pt9:B (2.2) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101185 2pt9:B (2.2) BS02 2MH 2.5.1.16 GO:0003824 ... Q8II73 17822713 MOAD: ic50=35uM
    101186 2pt9:C (2.2) BS01 S4M 2.5.1.16 GO:0003824 ... Q8II73 17822713
    101187 2pt9:C (2.2) BS02 2MH 2.5.1.16 GO:0003824 ... Q8II73 17822713 MOAD: ic50=35uM
    101188 2ptc:E (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    101189 2ptf:A (2.35) BS01 FMN ? N/A O26951 N/A
    101190 2ptf:B (2.35) BS01 FMN ? N/A O26951 N/A
    101191 2ptm:A (1.93) BS01 CMP ? N/A O76977 17562314 Manual survey: K1/2=1.1uM (17562314)
    101192 2ptn:A (1.55) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    101193 2ptq:A (2.0) BS01 FUM 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101194 2ptq:A (2.0) BS02 AMP 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101195 2ptq:A (2.0) BS03 FUM 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101196 2ptq:A (2.0) BS04 AMP 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101197 2ptq:B (2.0) BS01 FUM 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101198 2ptq:B (2.0) BS02 AMP 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101199 2ptq:B (2.0) BS03 FUM 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101200 2ptq:B (2.0) BS04 AMP 4.3.2.2 GO:0003824 ... P0AB89 17531264

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).