SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1012401 9kzu:SF (3.0) BS01 rna N/A GO:0002181 ... P46782 41337487
    1012402 9kzu:SG (3.0) BS01 rna N/A GO:0002181 ... P62753 41337487
    1012403 9kzu:SH (3.0) BS01 rna N/A GO:0002181 ... P62081 41337487
    1012404 9kzu:SI (3.0) BS01 rna N/A GO:0002181 ... P62241 41337487
    1012405 9kzu:SI (3.0) BS02 rna N/A GO:0002181 ... P62241 41337487
    1012406 9kzu:SJ (3.0) BS01 rna N/A GO:0002181 ... P46781 41337487
    1012407 9kzu:SK (3.0) BS01 rna N/A GO:0002181 ... P46783 41337487
    1012408 9kzu:SL (3.0) BS01 rna N/A GO:0002181 ... P62280 41337487
    1012409 9kzu:SN (3.0) BS01 rna N/A GO:0000462 ... P62277 41337487
    1012410 9kzu:SN (3.0) BS02 rna N/A GO:0000462 ... P62277 41337487
    1012411 9kzu:SO (3.0) BS01 rna N/A GO:0000028 ... P62263 41337487
    1012412 9kzu:SP (3.0) BS01 rna N/A GO:0000056 ... P62841 41337487
    1012413 9kzu:SP (3.0) BS02 rna N/A GO:0000056 ... P62841 41337487
    1012414 9kzu:SQ (3.0) BS01 rna N/A GO:0000462 ... P62249 41337487
    1012415 9kzu:SR (3.0) BS01 rna N/A GO:0002181 ... P08708 41337487
    1012416 9kzu:SS (3.0) BS01 rna N/A GO:0002181 ... P62269 41337487
    1012417 9kzu:ST (3.0) BS01 rna N/A GO:0000028 ... P39019 41337487
    1012418 9kzu:SU (3.0) BS01 rna N/A GO:0002181 ... P60866 41337487
    1012419 9kzu:SV (3.0) BS01 rna N/A GO:0000447 ... P63220 41337487
    1012420 9kzu:SW (3.0) BS01 rna N/A GO:0002181 ... P62244 41337487
    1012421 9kzu:SX (3.0) BS01 rna N/A GO:0002181 ... P62266 41337487
    1012422 9kzu:SY (3.0) BS01 rna N/A GO:0002181 ... P62847 41337487
    1012423 9kzu:SZ (3.0) BS01 rna N/A GO:0002181 ... P62851 41337487
    1012424 9kzu:Sa (3.0) BS01 rna N/A GO:0002181 ... P62854 41337487
    1012425 9kzu:Sa (3.0) BS02 ZN N/A GO:0002181 ... P62854 41337487
    1012426 9kzu:Sb (3.0) BS01 rna N/A GO:0002181 ... P42677 41337487
    1012427 9kzu:Sb (3.0) BS02 rna N/A GO:0002181 ... P42677 41337487
    1012428 9kzu:Sc (3.0) BS01 rna N/A GO:0000028 ... P62857 41337487
    1012429 9kzu:Sd (3.0) BS01 rna N/A GO:0002181 ... P62273 41337487
    1012430 9kzu:Se (3.0) BS01 rna N/A N/A P62861 41337487
    1012431 9kzu:Sf (3.0) BS01 rna N/A GO:0002181 ... P25398 41337487
    1012432 9kzu:Sg (3.0) BS01 rna N/A GO:0001891 ... P63244 41337487
    1012433 9kzu:sh (3.0) BS01 rna N/A GO:0002181 ... P62979 41337487
    1012434 9kzx:3a (3.3) BS01 rna N/A GO:0001732 ... Q14152 41337487
    1012435 9kzx:3c (3.3) BS01 rna N/A GO:0001732 ... Q99613 41337487
    1012436 9kzx:3c (3.3) BS02 rna N/A GO:0001732 ... Q99613 41337487
    1012437 9kzx:LA (3.3) BS01 rna N/A GO:0002181 ... P62917 41337487
    1012438 9kzx:LB (3.3) BS01 rna N/A GO:0002181 ... P39023 41337487
    1012439 9kzx:LC (3.3) BS01 rna N/A GO:0002181 ... P36578 41337487
    1012440 9kzx:LC (3.3) BS02 rna N/A GO:0002181 ... P36578 41337487
    1012441 9kzx:LC (3.3) BS03 peptide N/A GO:0002181 ... P36578 41337487
    1012442 9kzx:LD (3.3) BS01 rna N/A GO:0000027 ... P46777 41337487
    1012443 9kzx:LD (3.3) BS02 rna N/A GO:0000027 ... P46777 41337487
    1012444 9kzx:LE (3.3) BS01 rna N/A GO:0002181 ... Q02878 41337487
    1012445 9kzx:LF (3.3) BS01 rna N/A GO:0000463 ... P18124 41337487
    1012446 9kzx:LF (3.3) BS02 rna N/A GO:0000463 ... P18124 41337487
    1012447 9kzx:LG (3.3) BS01 rna N/A GO:0000470 ... P62424 41337487
    1012448 9kzx:LG (3.3) BS02 rna N/A GO:0000470 ... P62424 41337487
    1012449 9kzx:LH (3.3) BS01 rna N/A GO:0002181 ... P32969 41337487
    1012450 9kzx:LI (3.3) BS01 rna N/A GO:0000027 ... Q96L21 41337487
    1012451 9kzx:LI (3.3) BS02 rna N/A GO:0000027 ... Q96L21 41337487
    1012452 9kzx:LJ (3.3) BS01 rna N/A GO:0000027 ... P62913 41337487
    1012453 9kzx:LJ (3.3) BS02 rna N/A GO:0000027 ... P62913 41337487
    1012454 9kzx:LL (3.3) BS01 rna N/A GO:0002181 ... P26373 41337487
    1012455 9kzx:LL (3.3) BS02 rna N/A GO:0002181 ... P26373 41337487
    1012456 9kzx:LM (3.3) BS01 rna N/A GO:0002181 ... P50914 41337487
    1012457 9kzx:LN (3.3) BS01 rna N/A GO:0002181 ... P61313 41337487
    1012458 9kzx:LN (3.3) BS02 rna N/A GO:0002181 ... P61313 41337487
    1012459 9kzx:LO (3.3) BS01 rna N/A GO:0002181 ... P40429 41337487
    1012460 9kzx:LP (3.3) BS01 rna N/A GO:0002181 ... P18621 41337487
    1012461 9kzx:LP (3.3) BS02 rna N/A GO:0002181 ... P18621 41337487
    1012462 9kzx:LP (3.3) BS03 peptide N/A GO:0002181 ... P18621 41337487
    1012463 9kzx:LQ (3.3) BS01 rna N/A GO:0002181 ... Q07020 41337487
    1012464 9kzx:LR (3.3) BS01 rna N/A GO:0002181 ... P84098 41337487
    1012465 9kzx:LR (3.3) BS02 rna N/A GO:0002181 ... P84098 41337487
    1012466 9kzx:LS (3.3) BS01 rna N/A GO:0002181 ... Q02543 41337487
    1012467 9kzx:LS (3.3) BS02 rna N/A GO:0002181 ... Q02543 41337487
    1012468 9kzx:LT (3.3) BS01 rna N/A GO:0001650 ... P46778 41337487
    1012469 9kzx:LT (3.3) BS02 rna N/A GO:0001650 ... P46778 41337487
    1012470 9kzx:LU (3.3) BS01 rna N/A GO:0002181 ... P35268 41337487
    1012471 9kzx:LV (3.3) BS01 rna N/A GO:0000122 ... P62829 41337487
    1012472 9kzx:LV (3.3) BS02 rna N/A GO:0000122 ... P62829 41337487
    1012473 9kzx:LW (3.3) BS01 rna N/A GO:0002181 ... P83731 41337487
    1012474 9kzx:LX (3.3) BS01 rna N/A GO:0002181 ... P62750 41337487
    1012475 9kzx:LX (3.3) BS02 rna N/A GO:0002181 ... P62750 41337487
    1012476 9kzx:LY (3.3) BS01 rna N/A GO:0002181 ... P61254 41337487
    1012477 9kzx:LY (3.3) BS02 rna N/A GO:0002181 ... P61254 41337487
    1012478 9kzx:LZ (3.3) BS01 rna N/A GO:0002181 ... P61353 41337487
    1012479 9kzx:La (3.3) BS01 rna N/A GO:0002181 ... P46776 41337487
    1012480 9kzx:Lb (3.3) BS01 rna N/A GO:0002181 ... P47914 41337487
    1012481 9kzx:Lc (3.3) BS01 rna N/A GO:0002181 ... P62888 41337487
    1012482 9kzx:Ld (3.3) BS01 rna N/A GO:0002181 ... P62899 41337487
    1012483 9kzx:Le (3.3) BS01 rna N/A GO:0002181 ... P62910 41337487
    1012484 9kzx:Lf (3.3) BS01 rna N/A GO:0002181 ... P18077 41337487
    1012485 9kzx:Lg (3.3) BS01 rna N/A GO:0002181 ... P49207 41337487
    1012486 9kzx:Lh (3.3) BS01 rna N/A GO:0000463 ... P42766 41337487
    1012487 9kzx:Lh (3.3) BS02 rna N/A GO:0000463 ... P42766 41337487
    1012488 9kzx:Li (3.3) BS01 rna N/A GO:0002181 ... Q9Y3U8 41337487
    1012489 9kzx:Lj (3.3) BS01 rna N/A GO:0000448 ... P61927 41337487
    1012490 9kzx:Lj (3.3) BS02 rna N/A GO:0000448 ... P61927 41337487
    1012491 9kzx:Lj (3.3) BS03 ZN N/A GO:0000448 ... P61927 41337487
    1012492 9kzx:Lk (3.3) BS01 rna N/A GO:0002181 ... P63173 41337487
    1012493 9kzx:Ll (3.3) BS01 rna N/A GO:0002181 ... P62891 41337487
    1012494 9kzx:Ll (3.3) BS02 rna N/A GO:0002181 ... P62891 41337487
    1012495 9kzx:Lm (3.3) BS01 rna N/A GO:0002181 ... P62987 41337487
    1012496 9kzx:Lm (3.3) BS02 ZN N/A GO:0002181 ... P62987 41337487
    1012497 9kzx:Lo (3.3) BS01 rna N/A GO:0002181 ... P83881 41337487
    1012498 9kzx:Lo (3.3) BS02 ZN N/A GO:0002181 ... P83881 41337487
    1012499 9kzx:Lp (3.3) BS01 rna N/A GO:0002181 ... P61513 41337487
    1012500 9kzx:Lp (3.3) BS02 ZN N/A GO:0002181 ... P61513 41337487
    1012501 9kzx:Lr (3.3) BS01 rna N/A GO:0002181 ... P46779 41337487
    1012502 9kzx:SA (3.3) BS01 rna N/A GO:0000028 ... P08865 41337487
    1012503 9kzx:SB (3.3) BS01 rna N/A GO:0002181 ... P61247 41337487
    1012504 9kzx:SB (3.3) BS02 rna N/A GO:0002181 ... P61247 41337487
    1012505 9kzx:SC (3.3) BS01 rna N/A GO:0002181 ... P15880 41337487
    1012506 9kzx:SD (3.3) BS01 rna N/A GO:0001228 ... P23396 41337487
    1012507 9kzx:SE (3.3) BS01 rna N/A GO:0002181 ... P62701 41337487
    1012508 9kzx:SF (3.3) BS01 rna N/A GO:0002181 ... P46782 41337487
    1012509 9kzx:SG (3.3) BS01 rna N/A GO:0002181 ... P62753 41337487
    1012510 9kzx:SH (3.3) BS01 rna N/A GO:0002181 ... P62081 41337487
    1012511 9kzx:SI (3.3) BS01 rna N/A GO:0002181 ... P62241 41337487
    1012512 9kzx:SI (3.3) BS02 rna N/A GO:0002181 ... P62241 41337487
    1012513 9kzx:SJ (3.3) BS01 rna N/A GO:0002181 ... P46781 41337487
    1012514 9kzx:SK (3.3) BS01 rna N/A GO:0002181 ... P46783 41337487
    1012515 9kzx:SL (3.3) BS01 rna N/A GO:0002181 ... P62280 41337487
    1012516 9kzx:SN (3.3) BS01 rna N/A GO:0000462 ... P62277 41337487
    1012517 9kzx:SN (3.3) BS02 rna N/A GO:0000462 ... P62277 41337487
    1012518 9kzx:SO (3.3) BS01 rna N/A GO:0000028 ... P62263 41337487
    1012519 9kzx:SP (3.3) BS01 rna N/A GO:0000056 ... P62841 41337487
    1012520 9kzx:SP (3.3) BS02 rna N/A GO:0000056 ... P62841 41337487
    1012521 9kzx:SQ (3.3) BS01 rna N/A GO:0000462 ... P62249 41337487
    1012522 9kzx:SR (3.3) BS01 rna N/A GO:0002181 ... P08708 41337487
    1012523 9kzx:SS (3.3) BS01 rna N/A GO:0002181 ... P62269 41337487
    1012524 9kzx:ST (3.3) BS01 rna N/A GO:0000028 ... P39019 41337487
    1012525 9kzx:SU (3.3) BS01 rna N/A GO:0002181 ... P60866 41337487
    1012526 9kzx:SW (3.3) BS01 rna N/A GO:0002181 ... P62244 41337487
    1012527 9kzx:SX (3.3) BS01 rna N/A GO:0002181 ... P62266 41337487
    1012528 9kzx:SY (3.3) BS01 rna N/A GO:0002181 ... P62847 41337487
    1012529 9kzx:SZ (3.3) BS01 rna N/A GO:0002181 ... P62851 41337487
    1012530 9kzx:Sa (3.3) BS01 rna N/A GO:0002181 ... P62854 41337487
    1012531 9kzx:Sa (3.3) BS02 ZN N/A GO:0002181 ... P62854 41337487
    1012532 9kzx:Sb (3.3) BS01 rna N/A GO:0002181 ... P42677 41337487
    1012533 9kzx:Sb (3.3) BS02 rna N/A GO:0002181 ... P42677 41337487
    1012534 9kzx:Sc (3.3) BS01 rna N/A GO:0000028 ... P62857 41337487
    1012535 9kzx:Sd (3.3) BS01 rna N/A GO:0002181 ... P62273 41337487
    1012536 9kzx:Sd (3.3) BS02 ZN N/A GO:0002181 ... P62273 41337487
    1012537 9kzx:Se (3.3) BS01 rna N/A N/A P62861 41337487
    1012538 9kzx:Sf (3.3) BS01 rna N/A GO:0002181 ... P25398 41337487
    1012539 9kzx:Sg (3.3) BS01 rna N/A GO:0001891 ... P63244 41337487
    1012540 9kzx:sh (3.3) BS01 rna N/A GO:0002181 ... P62979 41337487
    1012541 9l00:A (3.78) BS01 A1EIM N/A GO:0000139 ... Q9Y6M5 40470835
    1012542 9l00:B (3.78) BS01 A1EIM N/A GO:0000139 ... Q9Y6M5 40470835
    1012543 9l04:A (2.25) BS01 A1L4C N/A GO:0004672 ... Q04771 40516669
    1012544 9l08:A (1.6) BS01 HEC N/A GO:0009055 ... N/A 40148242
    1012545 9l08:A (1.6) BS02 HEC N/A GO:0009055 ... N/A 40148242
    1012546 9l08:A (1.6) BS03 HEC N/A GO:0009055 ... N/A 40148242
    1012547 9l08:B (1.6) BS01 HEC N/A GO:0009055 ... N/A 40148242
    1012548 9l08:B (1.6) BS02 HEC N/A GO:0009055 ... N/A 40148242
    1012549 9l08:B (1.6) BS03 HEC N/A GO:0009055 ... N/A 40148242
    1012550 9l09:A (2.9) BS01 rna N/A GO:0003723 ... P0DTD1 39804580
    1012551 9l09:A (2.9) BS02 rna N/A GO:0003723 ... P0DTD1 39804580
    1012552 9l09:A (2.9) BS03 ZN N/A GO:0003723 ... P0DTD1 39804580
    1012553 9l09:A (2.9) BS04 ZN N/A GO:0003723 ... P0DTD1 39804580
    1012554 9l09:A (2.9) BS05 MG N/A GO:0003723 ... P0DTD1 39804580
    1012555 9l0c:A (3.2) BS01 A1EH2 N/A GO:0005477 ... O60669 41381736
    1012556 9l0h:E (3.57) BS01 A1D9A N/A GO:0001850 ... O09047
    P08173
    40501890
    1012557 9l0i:A (2.61) BS01 LBN N/A GO:0000810 ... O14494 41513850
    1012558 9l0i:A (2.61) BS02 PT5 N/A GO:0000810 ... O14494 41513850
    1012559 9l0i:A (2.61) BS03 LBN N/A GO:0000810 ... O14494 41513850
    1012560 9l0i:A (2.61) BS04 PT5 N/A GO:0000810 ... O14494 41513850
    1012561 9l0i:B (2.61) BS01 PT5 N/A GO:0000810 ... O14494 41513850
    1012562 9l0i:B (2.61) BS02 LBN N/A GO:0000810 ... O14494 41513850
    1012563 9l0i:B (2.61) BS03 PT5 N/A GO:0000810 ... O14494 41513850
    1012564 9l0i:B (2.61) BS04 LBN N/A GO:0000810 ... O14494 41513850
    1012565 9l0i:C (2.61) BS01 PT5 N/A GO:0000810 ... O14494 41513850
    1012566 9l0i:C (2.61) BS02 LBN N/A GO:0000810 ... O14494 41513850
    1012567 9l0i:C (2.61) BS03 PT5 N/A GO:0000810 ... O14494 41513850
    1012568 9l0i:C (2.61) BS04 LBN N/A GO:0000810 ... O14494 41513850
    1012569 9l0i:D (2.61) BS01 LBN N/A GO:0000810 ... O14494 41513850
    1012570 9l0i:D (2.61) BS02 PT5 N/A GO:0000810 ... O14494 41513850
    1012571 9l0i:D (2.61) BS03 LBN N/A GO:0000810 ... O14494 41513850
    1012572 9l0i:D (2.61) BS04 PT5 N/A GO:0000810 ... O14494 41513850
    1012573 9l0k:A (2.14) BS01 CL0 N/A GO:0000287 ... O78508 41393888
    1012574 9l0k:A (2.14) BS02 CLA N/A GO:0000287 ... O78508 41393888
    1012575 9l0k:A (2.14) BS03 CLA N/A GO:0000287 ... O78508 41393888
    1012576 9l0k:A (2.14) BS04 CLA N/A GO:0000287 ... O78508 41393888
    1012577 9l0k:A (2.14) BS05 CLA N/A GO:0000287 ... O78508 41393888
    1012578 9l0k:A (2.14) BS06 CLA N/A GO:0000287 ... O78508 41393888
    1012579 9l0k:A (2.14) BS07 CLA N/A GO:0000287 ... O78508 41393888
    1012580 9l0k:A (2.14) BS08 CLA N/A GO:0000287 ... O78508 41393888
    1012581 9l0k:A (2.14) BS09 CLA N/A GO:0000287 ... O78508 41393888
    1012582 9l0k:A (2.14) BS10 CLA N/A GO:0000287 ... O78508 41393888
    1012583 9l0k:A (2.14) BS11 CLA N/A GO:0000287 ... O78508 41393888
    1012584 9l0k:A (2.14) BS12 CLA N/A GO:0000287 ... O78508 41393888
    1012585 9l0k:A (2.14) BS13 CLA N/A GO:0000287 ... O78508 41393888
    1012586 9l0k:A (2.14) BS14 CLA N/A GO:0000287 ... O78508 41393888
    1012587 9l0k:A (2.14) BS15 CLA N/A GO:0000287 ... O78508 41393888
    1012588 9l0k:A (2.14) BS16 CLA N/A GO:0000287 ... O78508 41393888
    1012589 9l0k:A (2.14) BS17 CLA N/A GO:0000287 ... O78508 41393888
    1012590 9l0k:A (2.14) BS18 CLA N/A GO:0000287 ... O78508 41393888
    1012591 9l0k:A (2.14) BS19 CLA N/A GO:0000287 ... O78508 41393888
    1012592 9l0k:A (2.14) BS20 CLA N/A GO:0000287 ... O78508 41393888
    1012593 9l0k:A (2.14) BS21 CLA N/A GO:0000287 ... O78508 41393888
    1012594 9l0k:A (2.14) BS22 CLA N/A GO:0000287 ... O78508 41393888
    1012595 9l0k:A (2.14) BS23 CLA N/A GO:0000287 ... O78508 41393888
    1012596 9l0k:A (2.14) BS24 CLA N/A GO:0000287 ... O78508 41393888
    1012597 9l0k:A (2.14) BS25 CLA N/A GO:0000287 ... O78508 41393888
    1012598 9l0k:A (2.14) BS26 CLA N/A GO:0000287 ... O78508 41393888
    1012599 9l0k:A (2.14) BS27 CLA N/A GO:0000287 ... O78508 41393888
    1012600 9l0k:A (2.14) BS28 CLA N/A GO:0000287 ... O78508 41393888

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).