SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1013001 9l0u:B (2.28) BS01 PT5 N/A GO:0000810 ... O14494 41513850
    1013002 9l0u:B (2.28) BS02 LBN N/A GO:0000810 ... O14494 41513850
    1013003 9l0u:B (2.28) BS03 PT5 N/A GO:0000810 ... O14494 41513850
    1013004 9l0u:B (2.28) BS04 AV0 N/A GO:0000810 ... O14494 41513850
    1013005 9l0u:B (2.28) BS05 ZP7 N/A GO:0000810 ... O14494 41513850
    1013006 9l0u:B (2.28) BS06 PO4 N/A GO:0000810 ... O14494 41513850
    1013007 9l0u:B (2.28) BS07 LBN N/A GO:0000810 ... O14494 41513850
    1013008 9l0u:C (2.28) BS01 PT5 N/A GO:0000810 ... O14494 41513850
    1013009 9l0u:C (2.28) BS02 LBN N/A GO:0000810 ... O14494 41513850
    1013010 9l0u:C (2.28) BS03 PT5 N/A GO:0000810 ... O14494 41513850
    1013011 9l0u:C (2.28) BS04 AV0 N/A GO:0000810 ... O14494 41513850
    1013012 9l0u:C (2.28) BS05 ZP7 N/A GO:0000810 ... O14494 41513850
    1013013 9l0u:C (2.28) BS06 PO4 N/A GO:0000810 ... O14494 41513850
    1013014 9l0u:C (2.28) BS07 LBN N/A GO:0000810 ... O14494 41513850
    1013015 9l0u:D (2.28) BS01 LBN N/A GO:0000810 ... O14494 41513850
    1013016 9l0u:D (2.28) BS02 PT5 N/A GO:0000810 ... O14494 41513850
    1013017 9l0u:D (2.28) BS03 LBN N/A GO:0000810 ... O14494 41513850
    1013018 9l0u:D (2.28) BS04 PT5 N/A GO:0000810 ... O14494 41513850
    1013019 9l0u:D (2.28) BS05 AV0 N/A GO:0000810 ... O14494 41513850
    1013020 9l0u:D (2.28) BS06 ZP7 N/A GO:0000810 ... O14494 41513850
    1013021 9l0u:D (2.28) BS07 PO4 N/A GO:0000810 ... O14494 41513850
    1013022 9l0v:A (2.0) BS01 peptide N/A GO:0000122 ... P61964 41689289
    1013023 9l0x:C (3.22) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    1013024 9l0x:C (3.22) BS02 dna N/A GO:0000345 ... P0A8V2 N/A
    1013025 9l0x:D (3.22) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    1013026 9l0x:D (3.22) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    1013027 9l0x:F (3.22) BS01 dna N/A GO:0000976 ... P00579 N/A
    1013028 9l0x:F (3.22) BS02 dna N/A GO:0000976 ... P00579 N/A
    1013029 9l0x:H (3.22) BS01 dna N/A GO:0003677 ... P06022 N/A
    1013030 9l0x:H (3.22) BS02 dna N/A GO:0003677 ... P06022 N/A
    1013031 9l0x:I (3.22) BS01 dna N/A GO:0003677 ... P06022 N/A
    1013032 9l0x:I (3.22) BS02 dna N/A GO:0003677 ... P06022 N/A
    1013033 9l0y:C (3.78) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    1013034 9l0y:C (3.78) BS02 dna N/A GO:0000345 ... P0A8V2 N/A
    1013035 9l0y:D (3.78) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    1013036 9l0y:D (3.78) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    1013037 9l0y:F (3.78) BS01 dna N/A GO:0000976 ... P00579 N/A
    1013038 9l0y:F (3.78) BS02 dna N/A GO:0000976 ... P00579 N/A
    1013039 9l0y:G (3.78) BS01 dna N/A GO:0003677 ... P23848 N/A
    1013040 9l0y:G (3.78) BS02 dna N/A GO:0003677 ... P23848 N/A
    1013041 9l0y:M (3.78) BS01 dna N/A GO:0003677 ... P23848 N/A
    1013042 9l0y:N (3.78) BS01 dna N/A GO:0003677 ... P23848 N/A
    1013043 9l0y:N (3.78) BS02 dna N/A GO:0003677 ... P23848 N/A
    1013044 9l10:A (2.61) BS01 FMN N/A GO:0009055 ... L7PH54 40935041
    1013045 9l10:B (2.61) BS01 FMN N/A GO:0009055 ... L7PH54 40935041
    1013046 9l11:A (1.82) BS01 FAD N/A GO:0009055 ... L7PH54 40935041
    1013047 9l11:B (1.82) BS01 FAD N/A GO:0009055 ... L7PH54 40935041
    1013048 9l12:A (3.81) BS01 dna N/A N/A N/A 40372912
    1013049 9l12:A (3.81) BS02 dna N/A N/A N/A 40372912
    1013050 9l12:A (3.81) BS03 rna N/A N/A N/A 40372912
    1013051 9l12:A (3.81) BS04 MG N/A N/A N/A 40372912
    1013052 9l12:E (3.81) BS01 dna N/A N/A N/A 40372912
    1013053 9l12:E (3.81) BS02 dna N/A N/A N/A 40372912
    1013054 9l12:E (3.81) BS03 rna N/A N/A N/A 40372912
    1013055 9l12:E (3.81) BS04 MG N/A N/A N/A 40372912
    1013056 9l12:I (3.81) BS01 dna N/A N/A N/A 40372912
    1013057 9l12:I (3.81) BS02 dna N/A N/A N/A 40372912
    1013058 9l12:I (3.81) BS03 rna N/A N/A N/A 40372912
    1013059 9l12:I (3.81) BS04 MG N/A N/A N/A 40372912
    1013060 9l13:A (1.96) BS01 A1EH0 N/A N/A P0DTD1 N/A
    1013061 9l14:A (1.86) BS01 AP5 N/A GO:0000287 ... P69441 40400134
    1013062 9l1f:A (1.6) BS01 NAP N/A N/A F2QX95 N/A
    1013063 9l1f:B (1.6) BS01 NAP N/A N/A F2QX95 N/A
    1013064 9l1i:A (2.08) BS01 NAP N/A N/A F2QX95 N/A
    1013065 9l1i:B (2.08) BS01 NAP N/A N/A F2QX95 N/A
    1013066 9l1l:A (3.09) BS01 peptide N/A N/A P01910 N/A
    1013067 9l1l:B (3.09) BS01 peptide N/A N/A P06343 N/A
    1013068 9l1l:C (3.09) BS01 peptide N/A N/A N/A N/A
    1013069 9l1l:D (3.09) BS01 peptide N/A N/A N/A N/A
    1013070 9l1w:A (3.1) BS01 FE2 N/A GO:0005506 ... P0ABR5 40120277
    1013071 9l1w:A (3.1) BS02 FES N/A GO:0005506 ... P0ABR5 40120277
    1013072 9l1w:A (3.1) BS03 HCI N/A GO:0005506 ... P0ABR5 40120277
    1013073 9l1w:C (3.1) BS01 FE2 N/A GO:0005506 ... P0ABR5 40120277
    1013074 9l1w:C (3.1) BS02 FES N/A GO:0005506 ... P0ABR5 40120277
    1013075 9l1w:C (3.1) BS03 HCI N/A GO:0005506 ... P0ABR5 40120277
    1013076 9l1w:E (3.1) BS01 FE2 N/A GO:0005506 ... P0ABR5 40120277
    1013077 9l1w:E (3.1) BS02 FES N/A GO:0005506 ... P0ABR5 40120277
    1013078 9l1w:E (3.1) BS03 HCI N/A GO:0005506 ... P0ABR5 40120277
    1013079 9l1x:A (2.69) BS01 dna N/A GO:0000776 ... P84243 40379883
    1013080 9l1x:A (2.69) BS02 dna N/A GO:0000776 ... P84243 40379883
    1013081 9l1x:A (2.69) BS03 peptide N/A GO:0000776 ... P84243 40379883
    1013082 9l1x:B (2.69) BS01 dna N/A GO:0000781 ... P62805 40379883
    1013083 9l1x:C (2.69) BS01 dna N/A GO:0000786 ... P04908 40379883
    1013084 9l1x:C (2.69) BS02 dna N/A GO:0000786 ... P04908 40379883
    1013085 9l1x:C (2.69) BS03 peptide N/A GO:0000786 ... P04908 40379883
    1013086 9l1x:D (2.69) BS01 dna N/A GO:0000786 ... P06899 40379883
    1013087 9l1x:D (2.69) BS02 dna N/A GO:0000786 ... P06899 40379883
    1013088 9l1x:D (2.69) BS03 peptide N/A GO:0000786 ... P06899 40379883
    1013089 9l1x:E (2.69) BS01 dna N/A GO:0000776 ... P84243 40379883
    1013090 9l1x:E (2.69) BS02 dna N/A GO:0000776 ... P84243 40379883
    1013091 9l1x:E (2.69) BS03 peptide N/A GO:0000776 ... P84243 40379883
    1013092 9l1x:F (2.69) BS01 dna N/A GO:0000781 ... P62805 40379883
    1013093 9l1x:F (2.69) BS02 dna N/A GO:0000781 ... P62805 40379883
    1013094 9l1x:G (2.69) BS01 dna N/A GO:0000786 ... P04908 40379883
    1013095 9l1x:G (2.69) BS02 dna N/A GO:0000786 ... P04908 40379883
    1013096 9l1x:H (2.69) BS01 dna N/A GO:0000786 ... P06899 40379883
    1013097 9l1x:H (2.69) BS02 dna N/A GO:0000786 ... P06899 40379883
    1013098 9l1y:A (3.46) BS01 CLR N/A GO:0005788 ... P38435 N/A
    1013099 9l1y:A (3.46) BS02 Y01 N/A GO:0005788 ... P38435 N/A
    1013100 9l20:A (2.82) BS01 peptide N/A GO:0005788 ... P38435 N/A
    1013101 9l20:A (2.82) BS02 A1AT0 N/A GO:0005788 ... P38435 N/A
    1013102 9l20:A (2.82) BS03 CLR N/A GO:0005788 ... P38435 N/A
    1013103 9l20:A (2.82) BS04 Y01 N/A GO:0005788 ... P38435 N/A
    1013104 9l20:A (2.82) BS05 BCT N/A GO:0005788 ... P38435 N/A
    1013105 9l21:A (2.62) BS01 peptide N/A GO:0005788 ... P38435 N/A
    1013106 9l21:A (2.62) BS02 A1AVC N/A GO:0005788 ... P38435 N/A
    1013107 9l21:A (2.62) BS03 BCT N/A GO:0005788 ... P38435 N/A
    1013108 9l21:A (2.62) BS04 CLR N/A GO:0005788 ... P38435 N/A
    1013109 9l21:A (2.62) BS05 Y01 N/A GO:0005788 ... P38435 N/A
    1013110 9l22:A (3.0) BS01 dna N/A GO:0000776 ... P84243 40379883
    1013111 9l22:A (3.0) BS02 dna N/A GO:0000776 ... P84243 40379883
    1013112 9l22:B (3.0) BS01 dna N/A GO:0000781 ... P62805 40379883
    1013113 9l22:B (3.0) BS02 dna N/A GO:0000781 ... P62805 40379883
    1013114 9l22:C (3.0) BS01 dna N/A GO:0000786 ... P04908 40379883
    1013115 9l22:C (3.0) BS02 dna N/A GO:0000786 ... P04908 40379883
    1013116 9l22:D (3.0) BS01 dna N/A GO:0000786 ... P06899 40379883
    1013117 9l22:D (3.0) BS02 dna N/A GO:0000786 ... P06899 40379883
    1013118 9l22:E (3.0) BS01 dna N/A GO:0000776 ... P84243 40379883
    1013119 9l22:E (3.0) BS02 dna N/A GO:0000776 ... P84243 40379883
    1013120 9l22:F (3.0) BS01 dna N/A GO:0000781 ... P62805 40379883
    1013121 9l22:F (3.0) BS02 dna N/A GO:0000781 ... P62805 40379883
    1013122 9l22:G (3.0) BS01 dna N/A GO:0000786 ... P04908 40379883
    1013123 9l22:H (3.0) BS01 dna N/A GO:0000786 ... P06899 40379883
    1013124 9l22:H (3.0) BS02 dna N/A GO:0000786 ... P06899 40379883
    1013125 9l22:L (3.0) BS01 dna N/A GO:0003677 ... P35659 40379883
    1013126 9l23:A (2.62) BS01 A1AVC N/A GO:0005788 ... P38435 N/A
    1013127 9l23:A (2.62) BS02 CLR N/A GO:0005788 ... P38435 N/A
    1013128 9l23:A (2.62) BS03 Y01 N/A GO:0005788 ... P38435 N/A
    1013129 9l23:A (2.62) BS04 BCT N/A GO:0005788 ... P38435 N/A
    1013130 9l24:A (3.1) BS01 peptide N/A GO:0005788 ... P38435 N/A
    1013131 9l24:A (3.1) BS02 A1AVC N/A GO:0005788 ... P38435 N/A
    1013132 9l24:A (3.1) BS03 CLR N/A GO:0005788 ... P38435 N/A
    1013133 9l24:A (3.1) BS04 Y01 N/A GO:0005788 ... P38435 N/A
    1013134 9l25:A (2.41) BS01 peptide N/A GO:0005788 ... P38435 N/A
    1013135 9l25:A (2.41) BS02 A1AVC N/A GO:0005788 ... P38435 N/A
    1013136 9l25:A (2.41) BS03 CLR N/A GO:0005788 ... P38435 N/A
    1013137 9l25:A (2.41) BS04 Y01 N/A GO:0005788 ... P38435 N/A
    1013138 9l25:A (2.41) BS05 BCT N/A GO:0005788 ... P38435 N/A
    1013139 9l26:A (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013140 9l26:A (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013141 9l26:B (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013142 9l26:B (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013143 9l26:B (3.17) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1013144 9l26:C (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013145 9l26:C (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013146 9l26:C (3.17) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1013147 9l26:D (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013148 9l26:D (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013149 9l26:D (3.17) BS03 MG N/A GO:0004176 ... P28737 N/A
    1013150 9l26:D (3.17) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1013151 9l26:E (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013152 9l26:E (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013153 9l26:E (3.17) BS03 MG N/A GO:0004176 ... P28737 N/A
    1013154 9l26:E (3.17) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1013155 9l26:F (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013156 9l26:F (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013157 9l26:F (3.17) BS03 MG N/A GO:0004176 ... P28737 N/A
    1013158 9l26:F (3.17) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1013159 9l26:G (3.17) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1013160 9l26:G (3.17) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1013161 9l26:G (3.17) BS03 MG N/A GO:0004176 ... P28737 N/A
    1013162 9l26:G (3.17) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1013163 9l26:H (3.17) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1013164 9l29:A (2.05) BS01 NAD N/A GO:0000287 ... A0A2T1ME41 N/A
    1013165 9l2d:A (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013166 9l2d:B (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013167 9l2d:C (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013168 9l2d:D (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013169 9l2d:E (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013170 9l2d:F (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013171 9l2d:G (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013172 9l2d:H (2.83) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013173 9l2f:A (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013174 9l2f:B (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013175 9l2f:C (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013176 9l2f:D (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013177 9l2f:E (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013178 9l2f:F (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013179 9l2f:G (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013180 9l2f:H (3.55) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013181 9l2g:A (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013182 9l2g:B (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013183 9l2g:C (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013184 9l2g:D (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013185 9l2g:E (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013186 9l2g:F (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013187 9l2g:G (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013188 9l2g:H (3.27) BS01 A1EIV N/A GO:0003690 ... Q6SZW1 39964720
    1013189 9l2h:A (1.71) BS01 DPF N/A GO:0016788 ... A0A254UBZ6 N/A
    1013190 9l2i:A (3.42) BS01 FE N/A N/A Q27RN7 N/A
    1013191 9l2i:A (3.42) BS02 FE N/A N/A Q27RN7 N/A
    1013192 9l2i:D (3.42) BS01 FE N/A N/A Q27RN7 N/A
    1013193 9l2i:D (3.42) BS02 FE N/A N/A Q27RN7 N/A
    1013194 9l2n:A (1.7) BS01 ADP N/A GO:0001725 ... P68139 40658853
    1013195 9l2n:A (1.7) BS02 PO4 N/A GO:0001725 ... P68139 40658853
    1013196 9l2n:A (1.7) BS03 CY9 N/A GO:0001725 ... P68139 40658853
    1013197 9l2n:B (1.7) BS01 CA N/A GO:0051015 ... Q94707 40658853
    1013198 9l2n:B (1.7) BS02 CA N/A GO:0051015 ... Q94707 40658853
    1013199 9l2x:A (1.14) BS01 ZN N/A GO:0004064 ... P00918 40355440
    1013200 9l2y:A (1.2) BS01 ZN N/A GO:0004064 ... P00918 40355440

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).