SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1013401 9l56:B (2.42) BS02 MN N/A GO:0003677 ... B4FJZ1 40562815
    1013402 9l5m:A (2.0) BS01 CA N/A GO:0005509 ... N/A 41123418
    1013403 9l5m:A (2.0) BS02 CA N/A GO:0005509 ... N/A 41123418
    1013404 9l5m:B (2.0) BS01 CA N/A GO:0005509 ... N/A 41123418
    1013405 9l5m:B (2.0) BS02 CA N/A GO:0005509 ... N/A 41123418
    1013406 9l5m:C (2.0) BS01 CA N/A GO:0005509 ... N/A 41123418
    1013407 9l5m:C (2.0) BS02 CA N/A GO:0005509 ... N/A 41123418
    1013408 9l5o:A (1.9) BS01 peptide N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013409 9l5o:A (1.9) BS02 peptide N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013410 9l5o:A (1.9) BS03 CA N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013411 9l5o:A (1.9) BS04 CA N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013412 9l5o:A (1.9) BS05 CA N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013413 9l5o:A (1.9) BS06 ZN N/A GO:0004222 ... A0A8B3DGT3 N/A
    1013414 9l5r:0 (2.8) BS01 rna N/A GO:0000974 ... G0S7S7 40016598
    1013415 9l5r:0 (2.8) BS02 rna N/A GO:0000974 ... G0S7S7 40016598
    1013416 9l5r:A (2.8) BS01 rna N/A GO:0000398 ... N/A 40016598
    1013417 9l5r:A (2.8) BS02 rna N/A GO:0000398 ... N/A 40016598
    1013418 9l5r:A (2.8) BS03 rna N/A GO:0000398 ... N/A 40016598
    1013419 9l5r:A (2.8) BS04 rna N/A GO:0000398 ... N/A 40016598
    1013420 9l5r:B (2.8) BS01 rna N/A GO:0000398 ... G0S5N3 40016598
    1013421 9l5r:B (2.8) BS02 rna N/A GO:0000398 ... G0S5N3 40016598
    1013422 9l5r:B (2.8) BS03 peptide N/A GO:0000398 ... G0S5N3 40016598
    1013423 9l5r:B (2.8) BS04 M7M N/A GO:0000398 ... G0S5N3 40016598
    1013424 9l5r:C (2.8) BS01 rna N/A GO:0003924 ... G0SBV2 40016598
    1013425 9l5r:C (2.8) BS02 MG N/A GO:0003924 ... G0SBV2 40016598
    1013426 9l5r:C (2.8) BS03 GTP N/A GO:0003924 ... G0SBV2 40016598
    1013427 9l5r:Cc (2.8) BS01 rna N/A GO:0000390 ... G0RY84 40016598
    1013428 9l5r:D (2.8) BS01 rna N/A GO:0005634 ... G0RZD9 40016598
    1013429 9l5r:E (2.8) BS01 rna N/A GO:0003723 ... G0S9U7 40016598
    1013430 9l5r:F (2.8) BS01 IHP N/A GO:0005684 ... G0SDJ6 40016598
    1013431 9l5r:J (2.8) BS01 rna N/A GO:0000245 ... G0S0H7 40016598
    1013432 9l5r:J (2.8) BS02 IHP N/A GO:0000245 ... G0S0H7 40016598
    1013433 9l5r:L (2.8) BS01 rna N/A GO:0000398 ... G0S8A6 40016598
    1013434 9l5r:L (2.8) BS02 rna N/A GO:0000398 ... G0S8A6 40016598
    1013435 9l5r:L (2.8) BS03 rna N/A GO:0000398 ... G0S8A6 40016598
    1013436 9l5r:L (2.8) BS04 IHP N/A GO:0000398 ... G0S8A6 40016598
    1013437 9l5r:M (2.8) BS01 rna N/A GO:0000974 ... G0RYD8 40016598
    1013438 9l5r:M (2.8) BS02 ZN N/A GO:0000974 ... G0RYD8 40016598
    1013439 9l5r:M (2.8) BS03 ZN N/A GO:0000974 ... G0RYD8 40016598
    1013440 9l5r:N (2.8) BS01 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013441 9l5r:N (2.8) BS02 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013442 9l5r:N (2.8) BS03 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013443 9l5r:N (2.8) BS04 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013444 9l5r:N (2.8) BS05 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013445 9l5r:P (2.8) BS01 rna N/A GO:0000398 ... G0S754 40016598
    1013446 9l5r:P (2.8) BS02 rna N/A GO:0000398 ... G0S754 40016598
    1013447 9l5r:P (2.8) BS03 rna N/A GO:0000398 ... G0S754 40016598
    1013448 9l5r:R (2.8) BS01 rna N/A GO:0000398 ... G0SF87 40016598
    1013449 9l5r:R (2.8) BS02 rna N/A GO:0000398 ... G0SF87 40016598
    1013450 9l5r:U (2.8) BS01 rna N/A GO:0000398 ... G0S730 40016598
    1013451 9l5r:U (2.8) BS02 rna N/A GO:0000398 ... G0S730 40016598
    1013452 9l5r:U (2.8) BS03 ZN N/A GO:0000398 ... G0S730 40016598
    1013453 9l5r:W (2.8) BS01 rna N/A GO:0000398 ... G0S2N1 40016598
    1013454 9l5r:a (2.8) BS01 rna N/A GO:0000387 ... G0S8J0 40016598
    1013455 9l5r:b (2.8) BS01 rna N/A GO:0000398 ... G0RY82 40016598
    1013456 9l5r:c (2.8) BS01 rna N/A GO:0000398 ... G0S405 40016598
    1013457 9l5r:e (2.8) BS01 rna N/A GO:0000398 ... G0SHQ3 40016598
    1013458 9l5r:f (2.8) BS01 rna N/A GO:0000387 ... G0SG70 40016598
    1013459 9l5r:g (2.8) BS01 rna N/A GO:0000387 ... G0SI53 40016598
    1013460 9l5r:i (2.8) BS01 rna N/A GO:0003676 ... G0SBL9 40016598
    1013461 9l5r:j (2.8) BS01 rna N/A GO:0000387 ... G0S8J0 40016598
    1013462 9l5r:k (2.8) BS01 rna N/A GO:0000387 ... G0SI53 40016598
    1013463 9l5r:l (2.8) BS01 rna N/A GO:0000398 ... G0RY82 40016598
    1013464 9l5r:m (2.8) BS01 rna N/A GO:0000398 ... G0S405 40016598
    1013465 9l5r:o (2.8) BS01 rna N/A GO:0000387 ... G0RZL0 40016598
    1013466 9l5r:p (2.8) BS01 rna N/A GO:0000398 ... G0SHQ3 40016598
    1013467 9l5r:u (2.8) BS01 rna N/A GO:0000387 ... G0SG70 40016598
    1013468 9l5s:0 (2.9) BS01 rna N/A GO:0000974 ... G0S7S7 40016598
    1013469 9l5s:0 (2.9) BS02 rna N/A GO:0000974 ... G0S7S7 40016598
    1013470 9l5s:1 (2.9) BS01 rna N/A GO:0003676 ... G0SA63 40016598
    1013471 9l5s:1 (2.9) BS02 rna N/A GO:0003676 ... G0SA63 40016598
    1013472 9l5s:A (2.9) BS01 rna N/A GO:0000398 ... N/A 40016598
    1013473 9l5s:A (2.9) BS02 rna N/A GO:0000398 ... N/A 40016598
    1013474 9l5s:A (2.9) BS03 rna N/A GO:0000398 ... N/A 40016598
    1013475 9l5s:A (2.9) BS04 peptide N/A GO:0000398 ... N/A 40016598
    1013476 9l5s:A (2.9) BS05 rna N/A GO:0000398 ... N/A 40016598
    1013477 9l5s:B (2.9) BS01 rna N/A GO:0000398 ... G0S5N3 40016598
    1013478 9l5s:B (2.9) BS02 rna N/A GO:0000398 ... G0S5N3 40016598
    1013479 9l5s:B (2.9) BS03 M7M N/A GO:0000398 ... G0S5N3 40016598
    1013480 9l5s:C (2.9) BS01 rna N/A GO:0003924 ... G0SBV2 40016598
    1013481 9l5s:C (2.9) BS02 MG N/A GO:0003924 ... G0SBV2 40016598
    1013482 9l5s:C (2.9) BS03 GTP N/A GO:0003924 ... G0SBV2 40016598
    1013483 9l5s:J (2.9) BS01 rna N/A GO:0000245 ... G0S0H7 40016598
    1013484 9l5s:L (2.9) BS01 rna N/A GO:0000398 ... G0S8A6 40016598
    1013485 9l5s:M (2.9) BS01 rna N/A GO:0000974 ... G0RYD8 40016598
    1013486 9l5s:M (2.9) BS02 ZN N/A GO:0000974 ... G0RYD8 40016598
    1013487 9l5s:N (2.9) BS01 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013488 9l5s:N (2.9) BS02 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013489 9l5s:N (2.9) BS03 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013490 9l5s:N (2.9) BS04 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013491 9l5s:N (2.9) BS05 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013492 9l5s:P (2.9) BS01 rna N/A GO:0000398 ... G0S754 40016598
    1013493 9l5s:P (2.9) BS02 rna N/A GO:0000398 ... G0S754 40016598
    1013494 9l5s:R (2.9) BS01 rna N/A GO:0000398 ... G0SF87 40016598
    1013495 9l5s:R (2.9) BS02 rna N/A GO:0000398 ... G0SF87 40016598
    1013496 9l5s:T (2.9) BS01 rna N/A GO:0000398 ... G0S066 40016598
    1013497 9l5s:V (2.9) BS01 rna N/A GO:0005634 ... G0S4I7 40016598
    1013498 9l5s:W (2.9) BS01 rna N/A GO:0000398 ... G0S2N1 40016598
    1013499 9l5s:j (2.9) BS01 rna N/A GO:0000387 ... G0S8J0 40016598
    1013500 9l5s:k (2.9) BS01 rna N/A GO:0000387 ... G0SI53 40016598
    1013501 9l5s:l (2.9) BS01 rna N/A GO:0000398 ... G0RY82 40016598
    1013502 9l5s:m (2.9) BS01 rna N/A GO:0000398 ... G0S405 40016598
    1013503 9l5s:o (2.9) BS01 rna N/A GO:0000387 ... G0RZL0 40016598
    1013504 9l5s:p (2.9) BS01 rna N/A GO:0000398 ... G0SHQ3 40016598
    1013505 9l5s:u (2.9) BS01 rna N/A GO:0000387 ... G0SG70 40016598
    1013506 9l5s:z (2.9) BS01 rna N/A GO:0003676 ... G0RZD6 40016598
    1013507 9l5t:0 (3.5) BS01 rna N/A GO:0000974 ... G0S7S7 40016598
    1013508 9l5t:0 (3.5) BS02 rna N/A GO:0000974 ... G0S7S7 40016598
    1013509 9l5t:1 (3.5) BS01 rna N/A GO:0003676 ... G0SA63 40016598
    1013510 9l5t:1 (3.5) BS02 rna N/A GO:0003676 ... G0SA63 40016598
    1013511 9l5t:1 (3.5) BS03 rna N/A GO:0003676 ... G0SA63 40016598
    1013512 9l5t:A (3.5) BS01 rna N/A GO:0000398 ... N/A 40016598
    1013513 9l5t:A (3.5) BS02 rna N/A GO:0000398 ... N/A 40016598
    1013514 9l5t:A (3.5) BS03 rna N/A GO:0000398 ... N/A 40016598
    1013515 9l5t:A (3.5) BS04 peptide N/A GO:0000398 ... N/A 40016598
    1013516 9l5t:A (3.5) BS05 rna N/A GO:0000398 ... N/A 40016598
    1013517 9l5t:B (3.5) BS01 rna N/A GO:0000398 ... G0S5N3 40016598
    1013518 9l5t:B (3.5) BS02 rna N/A GO:0000398 ... G0S5N3 40016598
    1013519 9l5t:B (3.5) BS03 M7M N/A GO:0000398 ... G0S5N3 40016598
    1013520 9l5t:C (3.5) BS01 rna N/A GO:0003924 ... G0SBV2 40016598
    1013521 9l5t:C (3.5) BS02 GTP N/A GO:0003924 ... G0SBV2 40016598
    1013522 9l5t:E (3.5) BS01 rna N/A GO:0003723 ... G0S9U7 40016598
    1013523 9l5t:J (3.5) BS01 rna N/A GO:0000245 ... G0S0H7 40016598
    1013524 9l5t:L (3.5) BS01 rna N/A GO:0000398 ... G0S8A6 40016598
    1013525 9l5t:M (3.5) BS01 rna N/A GO:0000974 ... G0RYD8 40016598
    1013526 9l5t:M (3.5) BS02 ZN N/A GO:0000974 ... G0RYD8 40016598
    1013527 9l5t:M (3.5) BS03 ZN N/A GO:0000974 ... G0RYD8 40016598
    1013528 9l5t:N (3.5) BS01 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013529 9l5t:N (3.5) BS02 rna N/A GO:0000398 ... G0S4Q2 40016598
    1013530 9l5t:N (3.5) BS03 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013531 9l5t:N (3.5) BS04 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013532 9l5t:N (3.5) BS05 ZN N/A GO:0000398 ... G0S4Q2 40016598
    1013533 9l5t:P (3.5) BS01 rna N/A GO:0000398 ... G0S754 40016598
    1013534 9l5t:P (3.5) BS02 rna N/A GO:0000398 ... G0S754 40016598
    1013535 9l5t:P (3.5) BS03 rna N/A GO:0000398 ... G0S754 40016598
    1013536 9l5t:R (3.5) BS01 rna N/A GO:0000398 ... G0SF87 40016598
    1013537 9l5t:R (3.5) BS02 rna N/A GO:0000398 ... G0SF87 40016598
    1013538 9l5t:W (3.5) BS01 rna N/A GO:0000398 ... G0S2N1 40016598
    1013539 9l5t:j (3.5) BS01 rna N/A GO:0000387 ... G0S8J0 40016598
    1013540 9l5t:k (3.5) BS01 rna N/A GO:0000387 ... G0SI53 40016598
    1013541 9l5t:l (3.5) BS01 rna N/A GO:0000398 ... G0RY82 40016598
    1013542 9l5t:m (3.5) BS01 rna N/A GO:0000398 ... G0S405 40016598
    1013543 9l5t:o (3.5) BS01 rna N/A GO:0000387 ... G0RZL0 40016598
    1013544 9l5t:p (3.5) BS01 rna N/A GO:0000398 ... G0SHQ3 40016598
    1013545 9l5t:z (3.5) BS01 rna N/A GO:0003676 ... G0RZD6 40016598
    1013546 9l5v:1 (2.17) BS01 CLA N/A N/A N/A 41393888
    1013547 9l5v:1 (2.17) BS02 CLA N/A N/A N/A 41393888
    1013548 9l5v:1 (2.17) BS03 CLA N/A N/A N/A 41393888
    1013549 9l5v:1 (2.17) BS04 CLA N/A N/A N/A 41393888
    1013550 9l5v:1 (2.17) BS05 KC2 N/A N/A N/A 41393888
    1013551 9l5v:1 (2.17) BS06 CLA N/A N/A N/A 41393888
    1013552 9l5v:1 (2.17) BS07 CLA N/A N/A N/A 41393888
    1013553 9l5v:1 (2.17) BS08 CLA N/A N/A N/A 41393888
    1013554 9l5v:1 (2.17) BS09 CLA N/A N/A N/A 41393888
    1013555 9l5v:1 (2.17) BS10 KC2 N/A N/A N/A 41393888
    1013556 9l5v:1 (2.17) BS11 KC2 N/A N/A N/A 41393888
    1013557 9l5v:1 (2.17) BS12 KC2 N/A N/A N/A 41393888
    1013558 9l5v:1 (2.17) BS13 CLA N/A N/A N/A 41393888
    1013559 9l5v:1 (2.17) BS14 CLA N/A N/A N/A 41393888
    1013560 9l5v:1 (2.17) BS15 II0 N/A N/A N/A 41393888
    1013561 9l5v:1 (2.17) BS16 II0 N/A N/A N/A 41393888
    1013562 9l5v:1 (2.17) BS17 II0 N/A N/A N/A 41393888
    1013563 9l5v:1 (2.17) BS18 II0 N/A N/A N/A 41393888
    1013564 9l5v:1 (2.17) BS19 IHT N/A N/A N/A 41393888
    1013565 9l5v:1 (2.17) BS20 CLA N/A N/A N/A 41393888
    1013566 9l5v:2 (2.17) BS01 CLA N/A N/A N/A 41393888
    1013567 9l5v:2 (2.17) BS02 CLA N/A N/A N/A 41393888
    1013568 9l5v:2 (2.17) BS03 CLA N/A N/A N/A 41393888
    1013569 9l5v:2 (2.17) BS04 CLA N/A N/A N/A 41393888
    1013570 9l5v:2 (2.17) BS05 CLA N/A N/A N/A 41393888
    1013571 9l5v:2 (2.17) BS06 CLA N/A N/A N/A 41393888
    1013572 9l5v:2 (2.17) BS07 CLA N/A N/A N/A 41393888
    1013573 9l5v:2 (2.17) BS08 CLA N/A N/A N/A 41393888
    1013574 9l5v:2 (2.17) BS09 CLA N/A N/A N/A 41393888
    1013575 9l5v:2 (2.17) BS10 CLA N/A N/A N/A 41393888
    1013576 9l5v:2 (2.17) BS11 KC2 N/A N/A N/A 41393888
    1013577 9l5v:2 (2.17) BS12 CLA N/A N/A N/A 41393888
    1013578 9l5v:2 (2.17) BS13 CLA N/A N/A N/A 41393888
    1013579 9l5v:2 (2.17) BS14 II0 N/A N/A N/A 41393888
    1013580 9l5v:2 (2.17) BS15 II0 N/A N/A N/A 41393888
    1013581 9l5v:2 (2.17) BS16 II0 N/A N/A N/A 41393888
    1013582 9l5v:2 (2.17) BS17 II0 N/A N/A N/A 41393888
    1013583 9l5v:2 (2.17) BS18 IHT N/A N/A N/A 41393888
    1013584 9l5v:2 (2.17) BS19 CLA N/A N/A N/A 41393888
    1013585 9l5v:2 (2.17) BS20 II0 N/A N/A N/A 41393888
    1013586 9l5v:3 (2.17) BS01 CLA N/A N/A N/A 41393888
    1013587 9l5v:3 (2.17) BS02 II0 N/A N/A N/A 41393888
    1013588 9l5v:3 (2.17) BS03 CLA N/A N/A N/A 41393888
    1013589 9l5v:3 (2.17) BS04 CLA N/A N/A N/A 41393888
    1013590 9l5v:3 (2.17) BS05 CLA N/A N/A N/A 41393888
    1013591 9l5v:3 (2.17) BS06 KC2 N/A N/A N/A 41393888
    1013592 9l5v:3 (2.17) BS07 CLA N/A N/A N/A 41393888
    1013593 9l5v:3 (2.17) BS08 CLA N/A N/A N/A 41393888
    1013594 9l5v:3 (2.17) BS09 CLA N/A N/A N/A 41393888
    1013595 9l5v:3 (2.17) BS10 CLA N/A N/A N/A 41393888
    1013596 9l5v:3 (2.17) BS11 CLA N/A N/A N/A 41393888
    1013597 9l5v:3 (2.17) BS12 II0 N/A N/A N/A 41393888
    1013598 9l5v:3 (2.17) BS13 II0 N/A N/A N/A 41393888
    1013599 9l5v:3 (2.17) BS14 II0 N/A N/A N/A 41393888
    1013600 9l5v:3 (2.17) BS15 WVN N/A N/A N/A 41393888

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).