SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1014001 9l6w:E (3.07) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1014002 9l6w:E (3.07) BS03 MG N/A GO:0004176 ... P28737 N/A
    1014003 9l6w:E (3.07) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1014004 9l6w:F (3.07) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1014005 9l6w:F (3.07) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1014006 9l6w:F (3.07) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1014007 9l6x:A (1.89) BS01 rna N/A GO:0001682 ... O29494 40119732
    1014008 9l6x:C (1.89) BS01 rna N/A GO:0001682 ... O29494 40119732
    1014009 9l6x:C (1.89) BS02 rna N/A GO:0001682 ... O29494 40119732
    1014010 9l6y:A (3.12) BS01 rna N/A GO:0001682 ... O29494 40119732
    1014011 9l6y:C (3.12) BS01 rna N/A GO:0001682 ... O29494 40119732
    1014012 9l74:R (3.73) BS01 A1L69 N/A N/A Q99500 41252158
    1014013 9l76:A (2.88) BS01 PKZ N/A GO:0005515 ... P0AB67 N/A
    1014014 9l76:C (2.88) BS01 PKZ N/A GO:0005515 ... P0AB67 N/A
    1014015 9l77:A (1.5) BS01 A1EIQ N/A GO:0005886 ... A0A866WQ05 N/A
    1014016 9l77:B (1.5) BS01 A1EIQ N/A GO:0005886 ... A0A866WQ05 N/A
    1014017 9l77:C (1.5) BS01 A1EIQ N/A GO:0005886 ... A0A866WQ05 N/A
    1014018 9l77:D (1.5) BS01 A1EIQ N/A GO:0005886 ... A0A866WQ05 N/A
    1014019 9l79:R (2.98) BS01 8WL N/A GO:0004930 ... Q8TDV5 N/A
    1014020 9l7a:A (1.5) BS01 A1EKC N/A GO:0005886 ... A0A866WQ05 N/A
    1014021 9l7a:B (1.5) BS01 A1EKC N/A GO:0005886 ... A0A866WQ05 N/A
    1014022 9l7a:C (1.5) BS01 A1EKC N/A GO:0005886 ... A0A866WQ05 N/A
    1014023 9l7a:D (1.5) BS01 A1EKC N/A GO:0005886 ... A0A866WQ05 N/A
    1014024 9l7b:A (2.31) BS01 peptide N/A N/A A0A023J7B5 N/A
    1014025 9l7b:B (2.31) BS01 peptide N/A N/A A0A023J7B5 N/A
    1014026 9l7c:A (2.97) BS01 rna N/A N/A O28411 N/A
    1014027 9l7c:B (2.97) BS01 MG N/A N/A O28412 N/A
    1014028 9l7c:B (2.97) BS02 ATP N/A N/A O28412 N/A
    1014029 9l7c:B (2.97) BS03 ATP N/A N/A O28412 N/A
    1014030 9l7c:B (2.97) BS04 ZN N/A N/A O28412 N/A
    1014031 9l7c:C (2.97) BS01 rna N/A N/A O28413 N/A
    1014032 9l7c:D (2.97) BS01 rna N/A N/A O28416 N/A
    1014033 9l7c:E (2.97) BS01 rna N/A N/A O28416 N/A
    1014034 9l7c:F (2.97) BS01 rna N/A N/A O28416 N/A
    1014035 9l7c:I (2.97) BS01 rna N/A N/A O28418 N/A
    1014036 9l7d:A (3.1) BS01 rna N/A N/A O28411 N/A
    1014037 9l7d:B (3.1) BS01 ATP N/A N/A O28412 N/A
    1014038 9l7d:B (3.1) BS02 ATP N/A N/A O28412 N/A
    1014039 9l7d:B (3.1) BS03 ZN N/A N/A O28412 N/A
    1014040 9l7d:E (3.1) BS01 rna N/A N/A O28416 N/A
    1014041 9l7d:F (3.1) BS01 rna N/A N/A O28416 N/A
    1014042 9l7d:I (3.1) BS01 rna N/A N/A O28418 N/A
    1014043 9l7e:A (2.4) BS01 ADP N/A GO:0003777 ... P33176 40298806
    1014044 9l7f:A (1.498) BS01 ZN N/A GO:0008800 ... Q5U7L7 N/A
    1014045 9l7f:A (1.498) BS02 ZN N/A GO:0008800 ... Q5U7L7 N/A
    1014046 9l7f:A (1.498) BS03 A1EJI N/A GO:0008800 ... Q5U7L7 N/A
    1014047 9l7f:B (1.498) BS01 ZN N/A GO:0008800 ... Q5U7L7 N/A
    1014048 9l7f:B (1.498) BS02 ZN N/A GO:0008800 ... Q5U7L7 N/A
    1014049 9l7f:B (1.498) BS03 A1EJI N/A GO:0008800 ... Q5U7L7 N/A
    1014050 9l7m:A (3.48) BS01 GTP N/A GO:0000226 ... Q2XVP4 40298806
    1014051 9l7m:B (3.48) BS01 GTP N/A GO:0000226 ... P02554 40298806
    1014052 9l7m:C (3.48) BS01 GTP N/A GO:0000226 ... Q2XVP4 40298806
    1014053 9l7m:D (3.48) BS01 GTP N/A GO:0000226 ... P02554 40298806
    1014054 9l7n:A (2.23) BS01 peptide N/A N/A A0A023J7B5 N/A
    1014055 9l7n:B (2.23) BS01 peptide N/A N/A A0A023J7B5 N/A
    1014056 9l7p:A (3.03) BS01 dna N/A N/A N/A N/A
    1014057 9l7p:B (3.03) BS01 dna N/A N/A N/A N/A
    1014058 9l7p:B (3.03) BS02 ATP N/A N/A N/A N/A
    1014059 9l7p:C (3.03) BS01 rna N/A N/A N/A N/A
    1014060 9l7p:C (3.03) BS02 dna N/A N/A N/A N/A
    1014061 9l7p:C (3.03) BS03 ATP N/A N/A N/A N/A
    1014062 9l7p:D (3.03) BS01 dna N/A N/A N/A N/A
    1014063 9l7p:D (3.03) BS02 ATP N/A N/A N/A N/A
    1014064 9l7p:E (3.03) BS01 rna N/A N/A N/A N/A
    1014065 9l7p:E (3.03) BS02 dna N/A N/A N/A N/A
    1014066 9l7p:F (3.03) BS01 dna N/A N/A N/A N/A
    1014067 9l7p:F (3.03) BS02 rna N/A N/A N/A N/A
    1014068 9l7p:F (3.03) BS03 dna N/A N/A N/A N/A
    1014069 9l7p:H (3.03) BS01 ZN N/A N/A N/A N/A
    1014070 9l7q:A (1.82) BS01 HEM N/A GO:0005515 ... P00183 N/A
    1014071 9l7q:B (1.82) BS01 HEM N/A GO:0005515 ... P00183 N/A
    1014072 9l7r:A (2.04) BS01 HEM N/A GO:0005515 ... P00183 N/A
    1014073 9l7r:A (2.04) BS02 A1EI5 N/A GO:0005515 ... P00183 N/A
    1014074 9l7r:B (2.04) BS01 HEM N/A GO:0005515 ... P00183 N/A
    1014075 9l7r:B (2.04) BS02 A1EI5 N/A GO:0005515 ... P00183 N/A
    1014076 9l7s:A (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014077 9l7s:B (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014078 9l7s:C (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014079 9l7s:D (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014080 9l7s:E (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014081 9l7s:F (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014082 9l7s:G (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014083 9l7s:H (2.1) BS01 HEM N/A N/A F2Q7T0 N/A
    1014084 9l7t:A (1.98) BS01 A1EI5 N/A N/A F2Q7T0 N/A
    1014085 9l7t:A (1.98) BS02 HEM N/A N/A F2Q7T0 N/A
    1014086 9l7t:B (1.98) BS01 A1EI5 N/A N/A F2Q7T0 N/A
    1014087 9l7t:B (1.98) BS02 HEM N/A N/A F2Q7T0 N/A
    1014088 9l7u:A (2.7) BS01 HEM N/A N/A F2Q7T0 N/A
    1014089 9l7u:A (2.7) BS02 A1EI5 N/A N/A F2Q7T0 N/A
    1014090 9l7u:B (2.7) BS01 HEM N/A N/A F2Q7T0 N/A
    1014091 9l7u:B (2.7) BS02 A1EI5 N/A N/A F2Q7T0 N/A
    1014092 9l7v:A (2.02) BS01 HEM N/A N/A F2Q7T0 N/A
    1014093 9l7v:A (2.02) BS02 A1EI5 N/A N/A F2Q7T0 N/A
    1014094 9l7v:B (2.02) BS01 HEM N/A N/A F2Q7T0 N/A
    1014095 9l7v:B (2.02) BS02 A1EI5 N/A N/A F2Q7T0 N/A
    1014096 9l80:R (3.33) BS01 DR7 N/A GO:0004930 ... Q8TDV5 N/A
    1014097 9l84:R (3.22) BS01 DR7 N/A GO:0001996 ... P08588 N/A
    1014098 9l84:R (3.22) BS02 ALE N/A GO:0001996 ... P08588 N/A
    1014099 9l8e:A (1.37) BS01 dna N/A N/A P14711 N/A
    1014100 9l8g:A (1.35) BS01 FAD N/A GO:0016491 ... B4G043 39913263
    1014101 9l8h:A (1.85) BS01 ADP N/A GO:0005737 ... A0A0F7R6G7 N/A
    1014102 9l8h:A (1.85) BS02 A1L7C N/A GO:0005737 ... A0A0F7R6G7 N/A
    1014103 9l8i:A (1.7) BS01 BMA N/A GO:0005975 ... F8WRK9 40121185
    1014104 9l8i:A (1.7) BS02 BMA N/A GO:0005975 ... F8WRK9 40121185
    1014105 9l8k:A (1.7) BS01 MTL N/A GO:0005975 ... F8WRK9 40121185
    1014106 9l8k:A (1.7) BS02 BMA N/A GO:0005975 ... F8WRK9 40121185
    1014107 9l8l:C (3.22) BS01 DR7 N/A GO:0000139 ... P49407 N/A
    1014108 9l8l:R (3.22) BS01 DR7 N/A GO:0001540 ... P07550 N/A
    1014109 9l8l:R (3.22) BS02 P0G N/A GO:0001540 ... P07550 N/A
    1014110 9l8m:A (2.9) BS01 rna N/A GO:0003725 ... Q9GZC8 N/A
    1014111 9l8m:A (2.9) BS02 ZN N/A GO:0003725 ... Q9GZC8 N/A
    1014112 9l8m:A (2.9) BS03 Y01 N/A GO:0003725 ... Q9GZC8 N/A
    1014113 9l8n:A (3.4) BS01 ZN N/A GO:0003725 ... Q9GZC8 N/A
    1014114 9l8n:A (3.4) BS02 Y01 N/A GO:0003725 ... Q9GZC8 N/A
    1014115 9l8n:A (3.4) BS03 LBN N/A GO:0003725 ... Q9GZC8 N/A
    1014116 9l8n:A (3.4) BS04 LBN N/A GO:0003725 ... Q9GZC8 N/A
    1014117 9l8o:A (3.99) BS01 rna N/A GO:0003725 ... Q9GZC8 N/A
    1014118 9l8o:A (3.99) BS02 ZN N/A GO:0003725 ... Q9GZC8 N/A
    1014119 9l8p:A (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014120 9l8p:B (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014121 9l8p:C (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014122 9l8p:D (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014123 9l8p:E (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014124 9l8p:F (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014125 9l8p:G (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014126 9l8p:H (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014127 9l8p:I (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014128 9l8p:J (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014129 9l8p:K (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014130 9l8p:L (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014131 9l8p:N (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014132 9l8p:Y (7.3) BS01 ATP N/A GO:0001530 ... P10809 41124257
    1014133 9l8q:A (2.35) BS01 A1EJB N/A N/A Q14145 N/A
    1014134 9l8r:A (2.19) BS01 FES N/A GO:0003824 ... Q9LIR4 N/A
    1014135 9l8r:A (2.19) BS02 A1L7A N/A GO:0003824 ... Q9LIR4 N/A
    1014136 9l8r:A (2.19) BS03 MG N/A GO:0003824 ... Q9LIR4 N/A
    1014137 9l8u:A (2.53) BS01 dna N/A N/A A0A7D5JBM0 41438038
    1014138 9l8u:A (2.53) BS02 dna N/A N/A A0A7D5JBM0 41438038
    1014139 9l8u:A (2.53) BS03 DCP N/A N/A A0A7D5JBM0 41438038
    1014140 9l8u:A (2.53) BS04 MG N/A N/A A0A7D5JBM0 41438038
    1014141 9l8u:A (2.53) BS05 MG N/A N/A A0A7D5JBM0 41438038
    1014142 9l8u:A (2.53) BS06 DCP N/A N/A A0A7D5JBM0 41438038
    1014143 9l8v:A (2.23) BS01 ZN N/A N/A A0A516ELE7 N/A
    1014144 9l8v:A (2.23) BS02 ZN N/A N/A A0A516ELE7 N/A
    1014145 9l8v:A (2.23) BS03 GSU N/A N/A A0A516ELE7 N/A
    1014146 9l8v:B (2.23) BS01 ZN N/A N/A A0A516ELE7 N/A
    1014147 9l8v:B (2.23) BS02 ZN N/A N/A A0A516ELE7 N/A
    1014148 9l8v:B (2.23) BS03 GSU N/A N/A A0A516ELE7 N/A
    1014149 9l8v:B00Z (2.23) BS01 ZN N/A N/A A0A516ELE7 N/A
    1014150 9l8v:B00Z (2.23) BS02 ZN N/A N/A A0A516ELE7 N/A
    1014151 9l8v:B00Z (2.23) BS03 GSU N/A N/A A0A516ELE7 N/A
    1014152 9l8v:D (2.23) BS01 ZN N/A N/A A0A516ELE7 N/A
    1014153 9l8v:D (2.23) BS02 ZN N/A N/A A0A516ELE7 N/A
    1014154 9l8v:D (2.23) BS03 GSU N/A N/A A0A516ELE7 N/A
    1014155 9l8w:A (2.9) BS01 A1LVR N/A GO:0001508 ... O43526 41442279
    1014156 9l8w:A (2.9) BS02 A1LVR N/A GO:0001508 ... O43526 41442279
    1014157 9l8w:A (2.9) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1014158 9l8w:B (2.9) BS01 A1LVR N/A GO:0001508 ... O43526 41442279
    1014159 9l8w:B (2.9) BS02 A1LVR N/A GO:0001508 ... O43526 41442279
    1014160 9l8w:B (2.9) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1014161 9l8w:C (2.9) BS01 A1LVR N/A GO:0001508 ... O43526 41442279
    1014162 9l8w:C (2.9) BS02 A1LVR N/A GO:0001508 ... O43526 41442279
    1014163 9l8w:C (2.9) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1014164 9l8w:D (2.9) BS01 A1LVR N/A GO:0001508 ... O43526 41442279
    1014165 9l8w:D (2.9) BS02 A1LVR N/A GO:0001508 ... O43526 41442279
    1014166 9l8w:D (2.9) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1014167 9l90:A (2.79) BS01 U1C N/A GO:0005219 ... Q15413 N/A
    1014168 9l90:A (2.79) BS02 ACP N/A GO:0005219 ... Q15413 N/A
    1014169 9l90:B (2.79) BS01 U1C N/A GO:0005219 ... Q15413 N/A
    1014170 9l90:B (2.79) BS02 ACP N/A GO:0005219 ... Q15413 N/A
    1014171 9l91:A (3.0) BS01 ACP N/A GO:0005219 ... Q15413 N/A
    1014172 9l91:A (3.0) BS02 A1L7B N/A GO:0005219 ... Q15413 N/A
    1014173 9l91:B (3.0) BS01 ACP N/A GO:0005219 ... Q15413 N/A
    1014174 9l91:B (3.0) BS02 A1L7B N/A GO:0005219 ... Q15413 N/A
    1014175 9l93:C (1.73) BS01 FES N/A GO:0003713 ... Q13772 40705422
    1014176 9l93:D (1.73) BS01 FES N/A GO:0003713 ... Q13772 40705422
    1014177 9l99:N (3.6) BS01 CA N/A N/A P98155 40402741
    1014178 9l99:N (3.6) BS02 CA N/A N/A P98155 40402741
    1014179 9l9a:M (3.9) BS01 CA N/A N/A P98155 40402741
    1014180 9l9a:M (3.9) BS02 CA N/A N/A P98155 40402741
    1014181 9l9b:A (2.84) BS01 ADP N/A GO:0005219 ... Q15413 N/A
    1014182 9l9b:A (2.84) BS02 U1C N/A GO:0005219 ... Q15413 N/A
    1014183 9l9b:B (2.84) BS01 ADP N/A GO:0005219 ... Q15413 N/A
    1014184 9l9b:B (2.84) BS02 U1C N/A GO:0005219 ... Q15413 N/A
    1014185 9l9g:A (2.74) BS01 GLY N/A GO:0004793 ... A0A437Q8X1 N/A
    1014186 9l9g:B (2.74) BS01 PLG N/A GO:0004793 ... A0A437Q8X1 N/A
    1014187 9l9h:A (2.87) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1014188 9l9h:A (2.87) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1014189 9l9h:A (2.87) BS03 MG N/A GO:0004176 ... P28737 N/A
    1014190 9l9h:A (2.87) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1014191 9l9h:B (2.87) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1014192 9l9h:B (2.87) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1014193 9l9h:B (2.87) BS03 MG N/A GO:0004176 ... P28737 N/A
    1014194 9l9h:B (2.87) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1014195 9l9h:C (2.87) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1014196 9l9h:C (2.87) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1014197 9l9h:C (2.87) BS03 MG N/A GO:0004176 ... P28737 N/A
    1014198 9l9h:C (2.87) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1014199 9l9h:D (2.87) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1014200 9l9h:D (2.87) BS02 ATP N/A GO:0004176 ... P28737 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).