SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1016601 9ln9:K (2.97) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1016602 9ln9:K (2.97) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016603 9ln9:K (2.97) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016604 9ln9:L (2.97) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1016605 9ln9:L (2.97) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016606 9ln9:L (2.97) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016607 9ln9:M (2.97) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1016608 9ln9:M (2.97) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016609 9ln9:N (2.97) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1016610 9ln9:N (2.97) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016611 9ln9:N (2.97) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016612 9ln9:O (2.97) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1016613 9ln9:O (2.97) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016614 9lnb:A (3.15) BS01 LMN N/A GO:0005515 ... O43826 N/A
    1016615 9lnb:A (3.15) BS02 LMN N/A GO:0005515 ... O43826 N/A
    1016616 9lnb:A (3.15) BS03 LMN N/A GO:0005515 ... O43826 N/A
    1016617 9lnb:B (3.15) BS01 LMN N/A GO:0005515 ... O43826 N/A
    1016618 9lnb:B (3.15) BS02 LMN N/A GO:0005515 ... O43826 N/A
    1016619 9lnb:B (3.15) BS03 LMN N/A GO:0005515 ... O43826 N/A
    1016620 9lni:A (1.61) BS01 ZN N/A N/A N/A N/A
    1016621 9lni:A (1.61) BS02 ZN N/A N/A N/A N/A
    1016622 9lni:A (1.61) BS03 ZN N/A N/A N/A N/A
    1016623 9lnj:A (2.0) BS01 dna N/A N/A O80464 41260640
    1016624 9lnj:A (2.0) BS02 dna N/A N/A O80464 41260640
    1016625 9lnj:A (2.0) BS03 ZN N/A N/A O80464 41260640
    1016626 9lnk:A (2.55) BS01 dna N/A N/A O80464 41260640
    1016627 9lnk:A (2.55) BS02 dna N/A N/A O80464 41260640
    1016628 9lnk:A (2.55) BS03 ZN N/A N/A O80464 41260640
    1016629 9lnl:A (2.85) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016630 9lnl:B (2.85) BS01 A1EPQ N/A GO:0000226 ... Q6B856 N/A
    1016631 9lnl:B (2.85) BS02 GDP N/A GO:0000226 ... Q6B856 N/A
    1016632 9lnl:C (2.85) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016633 9lnl:C (2.85) BS02 MG N/A GO:0000226 ... Q2XVP4 N/A
    1016634 9lnl:C (2.85) BS03 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016635 9lnl:C (2.85) BS04 A1EPQ N/A GO:0000226 ... Q2XVP4 N/A
    1016636 9lnl:D (2.85) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    1016637 9lnl:D (2.85) BS02 GDP N/A GO:0000226 ... Q6B856 N/A
    1016638 9lnm:A (2.67) BS01 Y01 N/A GO:0003333 ... P48065 N/A
    1016639 9lnm:A (2.67) BS02 Y01 N/A GO:0003333 ... P48065 N/A
    1016640 9lnm:A (2.67) BS03 ABU N/A GO:0003333 ... P48065 N/A
    1016641 9lnn:A (2.6) BS01 Y01 N/A GO:0003333 ... P48065 N/A
    1016642 9lnn:A (2.6) BS02 Y01 N/A GO:0003333 ... P48065 N/A
    1016643 9lno:A (3.15) BS01 Y01 N/A GO:0003333 ... P48065 N/A
    1016644 9lno:A (3.15) BS02 Y01 N/A GO:0003333 ... P48065 N/A
    1016645 9lnp:E (1.76) BS01 dna N/A GO:0004844 ... P13051 40130361
    1016646 9lnp:E (1.76) BS02 CA N/A GO:0004844 ... P13051 40130361
    1016647 9lnq:E (1.74) BS01 dna N/A GO:0004844 ... P13051 40130361
    1016648 9lnr:A (2.1) BS01 A1EKR N/A GO:0000165 ... P28482 39979271
    1016649 9lnv:A (2.67) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016650 9lnv:A (2.67) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016651 9lnv:B (2.67) BS01 A1EPR N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016652 9lnv:B (2.67) BS02 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016653 9lnv:C (2.67) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016654 9lnv:C (2.67) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016655 9lnv:C (2.67) BS03 A1EPR N/A GO:0000226 ... Q2XVP4 N/A
    1016656 9lnv:D (2.67) BS01 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016657 9lnw:A (2.55) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016658 9lnw:A (2.55) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016659 9lnw:B (2.55) BS01 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016660 9lnw:B (2.55) BS02 A1EPS N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016661 9lnw:C (2.55) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016662 9lnw:C (2.55) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016663 9lnw:C (2.55) BS03 A1EPS N/A GO:0000226 ... Q2XVP4 N/A
    1016664 9lnw:D (2.55) BS01 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016665 9lnx:A (2.59) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016666 9lnx:A (2.59) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016667 9lnx:B (2.59) BS01 A1EPT N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016668 9lnx:B (2.59) BS02 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016669 9lnx:C (2.59) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1016670 9lnx:C (2.59) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    1016671 9lnx:C (2.59) BS03 A1EPT N/A GO:0000226 ... Q2XVP4 N/A
    1016672 9lnx:D (2.59) BS01 GDP N/A GO:0003924 ... A0A8D1UIR5 N/A
    1016673 9lny:A (2.4) BS01 FE N/A GO:0004322 ... P02794 N/A
    1016674 9lny:A (2.4) BS02 FE N/A GO:0004322 ... P02794 N/A
    1016675 9lny:A (2.4) BS03 A1EKS N/A GO:0004322 ... P02794 N/A
    1016676 9lnz:B (1.93) BS01 99C N/A N/A A0A345DF50 40294650
    1016677 9lo3:A (1.75) BS01 5GP N/A GO:0001917 ... Q16774 40715061
    1016678 9lo3:A (1.75) BS02 ADP N/A GO:0001917 ... Q16774 40715061
    1016679 9lo3:A (1.75) BS03 ALF N/A GO:0001917 ... Q16774 40715061
    1016680 9lo6:A (1.8) BS01 ADP N/A GO:0001917 ... Q16774 40715061
    1016681 9lo6:A (1.8) BS02 5GP N/A GO:0001917 ... Q16774 40715061
    1016682 9lo6:A (1.8) BS03 ALF N/A GO:0001917 ... Q16774 40715061
    1016683 9lo7:A (2.20006) BS01 ZN N/A GO:0004114 ... Q08499 40066994
    1016684 9lo7:A (2.20006) BS02 A1EKX N/A GO:0004114 ... Q08499 40066994
    1016685 9lo7:B (2.20006) BS01 ZN N/A GO:0004114 ... Q08499 40066994
    1016686 9lo7:B (2.20006) BS02 A1EKX N/A GO:0004114 ... Q08499 40066994
    1016687 9lo8:B (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016688 9lo8:C (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016689 9lo8:C (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016690 9lo8:D (2.83) BS01 MG N/A GO:0004176 ... P28737 N/A
    1016691 9lo8:D (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016692 9lo8:D (2.83) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016693 9lo8:E (2.83) BS01 MG N/A GO:0004176 ... P28737 N/A
    1016694 9lo8:E (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016695 9lo8:E (2.83) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016696 9lo8:F (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016697 9lo8:F (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016698 9lo8:G (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016699 9lo8:G (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016700 9lo8:H (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016701 9lo8:H (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016702 9lo8:I (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016703 9lo8:I (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016704 9lo8:J (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016705 9lo8:J (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016706 9lo8:K (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016707 9lo8:K (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016708 9lo8:L (2.83) BS01 MG N/A GO:0004176 ... P28737 N/A
    1016709 9lo8:L (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016710 9lo8:L (2.83) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016711 9lo8:M (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016712 9lo8:M (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016713 9lo8:N (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016714 9lo8:N (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016715 9lo8:O (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016716 9lo8:O (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016717 9lo8:P (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016718 9lo8:P (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016719 9lo8:Q (2.83) BS01 MG N/A GO:0004176 ... P28737 N/A
    1016720 9lo8:Q (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016721 9lo8:Q (2.83) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1016722 9lo8:R (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016723 9lo8:R (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016724 9lo8:S (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016725 9lo8:S (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016726 9lo8:T (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016727 9lo8:T (2.83) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1016728 9lo8:U (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016729 9lo8:V (2.83) BS01 ATP N/A GO:0004176 ... P28737 N/A
    1016730 9lod:B (3.16) BS01 BMA N/A N/A P0DOX5 41477863
    1016731 9lod:C (3.16) BS01 BMA N/A N/A P0DOX5 41477863
    1016732 9lof:B (3.03) BS01 MAN N/A N/A N/A N/A
    1016733 9loh:B (3.02) BS01 A1EJ8 N/A GO:0003700 ... P97481 41047546
    1016734 9loi:B (2.78) BS01 A1EKA N/A GO:0003700 ... P97481 41047546
    1016735 9lom:A (1.63) BS01 ZN N/A N/A Q15326 N/A
    1016736 9lom:A (1.63) BS02 ZN N/A N/A Q15326 N/A
    1016737 9lot:A (1.59) BS01 A1EKY N/A GO:0000166 ... E2QFN4 N/A
    1016738 9lot:A (1.59) BS02 CLW N/A GO:0000166 ... E2QFN4 N/A
    1016739 9lot:B (1.59) BS01 CLW N/A GO:0000166 ... E2QFN4 N/A
    1016740 9lot:B (1.59) BS02 TYM N/A GO:0000166 ... E2QFN4 N/A
    1016741 9lou:A (3.36) BS01 rna N/A GO:0002753 ... Q96C10 N/A
    1016742 9lou:A (3.36) BS02 rna N/A GO:0002753 ... Q96C10 N/A
    1016743 9lou:A (3.36) BS03 ADP N/A GO:0002753 ... Q96C10 N/A
    1016744 9lou:A (3.36) BS04 ZN N/A GO:0002753 ... Q96C10 N/A
    1016745 9lov:A (3.07) BS01 rna N/A GO:0002753 ... Q96C10 N/A
    1016746 9lov:A (3.07) BS02 rna N/A GO:0002753 ... Q96C10 N/A
    1016747 9lov:A (3.07) BS03 ADP N/A GO:0002753 ... Q96C10 N/A
    1016748 9lov:A (3.07) BS04 ZN N/A GO:0002753 ... Q96C10 N/A
    1016749 9lov:B (3.07) BS01 rna N/A N/A Q9BYX4 N/A
    1016750 9lov:B (3.07) BS02 rna N/A N/A Q9BYX4 N/A
    1016751 9lov:B (3.07) BS03 ADP N/A N/A Q9BYX4 N/A
    1016752 9lov:B (3.07) BS04 ZN N/A N/A Q9BYX4 N/A
    1016753 9lov:C (3.07) BS01 rna N/A N/A Q9BYX4 N/A
    1016754 9lov:C (3.07) BS02 rna N/A N/A Q9BYX4 N/A
    1016755 9lov:C (3.07) BS03 ADP N/A N/A Q9BYX4 N/A
    1016756 9lov:C (3.07) BS04 ZN N/A N/A Q9BYX4 N/A
    1016757 9low:A (2.5) BS01 A1EKZ N/A GO:0003677 ... A0A0F6AY66 N/A
    1016758 9low:B (2.5) BS01 A1EKZ N/A GO:0003677 ... A0A0F6AY66 N/A
    1016759 9low:C (2.5) BS01 A1EKZ N/A GO:0003677 ... A0A0F6AY66 N/A
    1016760 9low:D (2.5) BS01 A1EKZ N/A GO:0003677 ... A0A0F6AY66 N/A
    1016761 9lp2:A (2.7) BS01 308 N/A N/A N/A 41477902
    1016762 9lp2:B (2.7) BS01 308 N/A N/A N/A 41477902
    1016763 9lp2:B (2.7) BS02 308 N/A N/A N/A 41477902
    1016764 9lp2:D (2.7) BS01 308 N/A N/A N/A 41477902
    1016765 9lp2:F (2.7) BS01 308 N/A N/A N/A 41477902
    1016766 9lp2:G (2.7) BS01 308 N/A N/A N/A 41477902
    1016767 9lp2:G (2.7) BS02 308 N/A N/A N/A 41477902
    1016768 9lp2:H (2.7) BS01 308 N/A N/A N/A 41477902
    1016769 9lp3:A (2.2) BS01 FE N/A GO:0010436 ... A0A420Y5X8 N/A
    1016770 9lp3:B (2.2) BS01 FE N/A GO:0010436 ... A0A420Y5X8 N/A
    1016771 9lp4:A (2.96) BS01 peptide N/A N/A Q15326 N/A
    1016772 9lp4:A (2.96) BS02 ZN N/A N/A Q15326 N/A
    1016773 9lp4:A (2.96) BS03 ZN N/A N/A Q15326 N/A
    1016774 9lp4:C (2.96) BS01 peptide N/A N/A Q15326 N/A
    1016775 9lp4:C (2.96) BS02 ZN N/A N/A Q15326 N/A
    1016776 9lp4:C (2.96) BS03 ZN N/A N/A Q15326 N/A
    1016777 9lp9:A (3.2) BS01 rna N/A GO:0003964 ... P0DV59 41172990
    1016778 9lp9:A (3.2) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016779 9lp9:A (3.2) BS03 dna N/A GO:0003964 ... P0DV59 41172990
    1016780 9lp9:B (3.2) BS01 rna N/A N/A P0DV58 41172990
    1016781 9lp9:B (3.2) BS02 dna N/A N/A P0DV58 41172990
    1016782 9lp9:B (3.2) BS03 dna N/A N/A P0DV58 41172990
    1016783 9lp9:E (3.2) BS01 dna N/A N/A P0DV58 41172990
    1016784 9lp9:E (3.2) BS02 dna N/A N/A P0DV58 41172990
    1016785 9lp9:E (3.2) BS03 rna N/A N/A P0DV58 41172990
    1016786 9lp9:F (3.2) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016787 9lp9:F (3.2) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016788 9lp9:F (3.2) BS03 rna N/A GO:0003964 ... P0DV59 41172990
    1016789 9lp9:I (3.2) BS01 dna N/A N/A P0DV58 41172990
    1016790 9lp9:I (3.2) BS02 dna N/A N/A P0DV58 41172990
    1016791 9lp9:I (3.2) BS03 rna N/A N/A P0DV58 41172990
    1016792 9lp9:J (3.2) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016793 9lp9:J (3.2) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016794 9lp9:J (3.2) BS03 rna N/A GO:0003964 ... P0DV59 41172990
    1016795 9lp9:M (3.2) BS01 dna N/A N/A P0DV58 41172990
    1016796 9lp9:M (3.2) BS02 dna N/A N/A P0DV58 41172990
    1016797 9lp9:M (3.2) BS03 rna N/A N/A P0DV58 41172990
    1016798 9lp9:N (3.2) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016799 9lp9:N (3.2) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016800 9lp9:N (3.2) BS03 rna N/A GO:0003964 ... P0DV59 41172990

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).