SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1016801 9lpa:A (3.3) BS01 rna N/A GO:0003964 ... P0DV59 41172990
    1016802 9lpa:A (3.3) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016803 9lpa:A (3.3) BS03 dna N/A GO:0003964 ... P0DV59 41172990
    1016804 9lpa:B (3.3) BS01 rna N/A N/A P0DV58 41172990
    1016805 9lpa:B (3.3) BS02 dna N/A N/A P0DV58 41172990
    1016806 9lpa:B (3.3) BS03 dna N/A N/A P0DV58 41172990
    1016807 9lpa:B (3.3) BS04 dna N/A N/A P0DV58 41172990
    1016808 9lpa:B (3.3) BS05 ATP N/A N/A P0DV58 41172990
    1016809 9lpa:B (3.3) BS06 ATP N/A N/A P0DV58 41172990
    1016810 9lpa:E (3.3) BS01 dna N/A N/A P0DV58 41172990
    1016811 9lpa:E (3.3) BS02 dna N/A N/A P0DV58 41172990
    1016812 9lpa:E (3.3) BS03 dna N/A N/A P0DV58 41172990
    1016813 9lpa:E (3.3) BS04 rna N/A N/A P0DV58 41172990
    1016814 9lpa:E (3.3) BS05 ATP N/A N/A P0DV58 41172990
    1016815 9lpa:E (3.3) BS06 ATP N/A N/A P0DV58 41172990
    1016816 9lpa:F (3.3) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016817 9lpa:F (3.3) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016818 9lpa:F (3.3) BS03 rna N/A GO:0003964 ... P0DV59 41172990
    1016819 9lpa:I (3.3) BS01 dna N/A N/A P0DV58 41172990
    1016820 9lpa:I (3.3) BS02 dna N/A N/A P0DV58 41172990
    1016821 9lpa:I (3.3) BS03 dna N/A N/A P0DV58 41172990
    1016822 9lpa:I (3.3) BS04 rna N/A N/A P0DV58 41172990
    1016823 9lpa:I (3.3) BS05 ATP N/A N/A P0DV58 41172990
    1016824 9lpa:I (3.3) BS06 ATP N/A N/A P0DV58 41172990
    1016825 9lpa:J (3.3) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016826 9lpa:J (3.3) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016827 9lpa:J (3.3) BS03 rna N/A GO:0003964 ... P0DV59 41172990
    1016828 9lpa:M (3.3) BS01 dna N/A N/A P0DV58 41172990
    1016829 9lpa:M (3.3) BS02 dna N/A N/A P0DV58 41172990
    1016830 9lpa:M (3.3) BS03 dna N/A N/A P0DV58 41172990
    1016831 9lpa:M (3.3) BS04 rna N/A N/A P0DV58 41172990
    1016832 9lpa:M (3.3) BS05 ATP N/A N/A P0DV58 41172990
    1016833 9lpa:M (3.3) BS06 ATP N/A N/A P0DV58 41172990
    1016834 9lpa:N (3.3) BS01 dna N/A GO:0003964 ... P0DV59 41172990
    1016835 9lpa:N (3.3) BS02 dna N/A GO:0003964 ... P0DV59 41172990
    1016836 9lpa:N (3.3) BS03 rna N/A GO:0003964 ... P0DV59 41172990
    1016837 9lpc:A (2.82) BS01 rna N/A GO:0000166 ... E2QFN4 N/A
    1016838 9lpc:A (2.82) BS02 rna N/A GO:0000166 ... E2QFN4 N/A
    1016839 9lpc:B (2.82) BS01 rna N/A GO:0000166 ... E2QFN4 N/A
    1016840 9lpc:B (2.82) BS02 rna N/A GO:0000166 ... E2QFN4 N/A
    1016841 9lpd:A (2.05) BS01 A1EK0 N/A GO:0000166 ... E2QFN4 N/A
    1016842 9lpd:A (2.05) BS02 CLW N/A GO:0000166 ... E2QFN4 N/A
    1016843 9lpd:B (2.05) BS01 CLW N/A GO:0000166 ... E2QFN4 N/A
    1016844 9lpd:B (2.05) BS02 TYM N/A GO:0000166 ... E2QFN4 N/A
    1016845 9lpe:A (3.11) BS01 dna N/A N/A Q93V99 40583771
    1016846 9lpe:A (3.11) BS02 dna N/A N/A Q93V99 40583771
    1016847 9lpe:B (3.11) BS01 dna N/A N/A Q93V99 40583771
    1016848 9lpe:B (3.11) BS02 dna N/A N/A Q93V99 40583771
    1016849 9lpg:A (2.8) BS01 FAD N/A GO:0006950 ... B8A2L5 N/A
    1016850 9lpg:B (2.8) BS01 FAD N/A GO:0006950 ... B8A2L5 N/A
    1016851 9lpi:A (1.2) BS01 BGC N/A N/A N/A 41166426
    1016852 9lpl:A (2.7) BS01 A1EWE N/A GO:0004315 ... P0AAI5 N/A
    1016853 9lpl:B (2.7) BS01 A1EWE N/A GO:0004315 ... P0AAI5 N/A
    1016854 9lpr:A (2.2) BS01 peptide 3.4.21.12 GO:0004252 ... P00778 1931963
    1016855 9lpv:A (1.32) BS01 G2F N/A N/A N/A 41166426
    1016856 9lpx:A (1.32) BS01 G2F N/A GO:0004553 ... N/A 41166426
    1016857 9lpy:A (1.11) BS01 G2F N/A GO:0004553 ... N/A 41166426
    1016858 9lq1:A (3.36) BS01 ZN N/A GO:0000122 ... Q9Y6K1 N/A
    1016859 9lq1:A (3.36) BS02 ZN N/A GO:0000122 ... Q9Y6K1 N/A
    1016860 9lq1:A (3.36) BS03 ZN N/A GO:0000122 ... Q9Y6K1 N/A
    1016861 9lq1:F (3.36) BS01 ZN N/A GO:0000122 ... Q9Y6K1 N/A
    1016862 9lq1:F (3.36) BS02 ZN N/A GO:0000122 ... Q9Y6K1 N/A
    1016863 9lq3:A (2.8) BS01 peptide N/A GO:0003677 ... Q96RI1 N/A
    1016864 9lq3:A (2.8) BS02 A1ELK N/A GO:0003677 ... Q96RI1 N/A
    1016865 9lq5:A (2.97) BS01 rna N/A N/A A0A5M5QTL0 N/A
    1016866 9lq5:B (2.97) BS01 MN N/A N/A A0A5C6J4N7 N/A
    1016867 9lq5:C (2.97) BS01 rna N/A N/A A0A9X9IKM4 N/A
    1016868 9lq5:D (2.97) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016869 9lq5:E (2.97) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016870 9lq5:F (2.97) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016871 9lq5:I (2.97) BS01 rna N/A N/A A0A2M9V7I0 N/A
    1016872 9lq6:A (2.94) BS01 rna N/A N/A A0A5M5QTL0 N/A
    1016873 9lq6:A (2.94) BS02 rna N/A N/A A0A5M5QTL0 N/A
    1016874 9lq6:B (2.94) BS01 rna N/A N/A A0A5C6J4N7 N/A
    1016875 9lq6:B (2.94) BS02 ATP N/A N/A A0A5C6J4N7 N/A
    1016876 9lq6:B (2.94) BS03 SAM N/A N/A A0A5C6J4N7 N/A
    1016877 9lq6:B (2.94) BS04 MN N/A N/A A0A5C6J4N7 N/A
    1016878 9lq6:C (2.94) BS01 rna N/A N/A A0A9X9IKM4 N/A
    1016879 9lq6:D (2.94) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016880 9lq6:D (2.94) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016881 9lq6:E (2.94) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016882 9lq6:E (2.94) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016883 9lq6:F (2.94) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016884 9lq6:F (2.94) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016885 9lq6:G (2.94) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016886 9lq6:H (2.94) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016887 9lq6:I (2.94) BS01 rna N/A N/A A0A2M9V7I0 N/A
    1016888 9lq6:I (2.94) BS02 rna N/A N/A A0A2M9V7I0 N/A
    1016889 9lq7:A (2.81) BS01 rna N/A N/A A0A5M5QTL0 N/A
    1016890 9lq7:A (2.81) BS02 rna N/A N/A A0A5M5QTL0 N/A
    1016891 9lq7:B (2.81) BS01 rna N/A N/A A0A5C6J4N7 N/A
    1016892 9lq7:B (2.81) BS02 ATP N/A N/A A0A5C6J4N7 N/A
    1016893 9lq7:B (2.81) BS03 SAM N/A N/A A0A5C6J4N7 N/A
    1016894 9lq7:B (2.81) BS04 MN N/A N/A A0A5C6J4N7 N/A
    1016895 9lq7:C (2.81) BS01 rna N/A N/A A0A9X9IKM4 N/A
    1016896 9lq7:C (2.81) BS02 rna N/A N/A A0A9X9IKM4 N/A
    1016897 9lq7:D (2.81) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016898 9lq7:D (2.81) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016899 9lq7:E (2.81) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016900 9lq7:E (2.81) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016901 9lq7:F (2.81) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016902 9lq7:F (2.81) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016903 9lq7:G (2.81) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016904 9lq7:H (2.81) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016905 9lq7:I (2.81) BS01 rna N/A N/A A0A2M9V7I0 N/A
    1016906 9lq7:I (2.81) BS02 rna N/A N/A A0A2M9V7I0 N/A
    1016907 9lq8:A (2.85) BS01 rna N/A N/A A0A5M5QTL0 N/A
    1016908 9lq8:A (2.85) BS02 rna N/A N/A A0A5M5QTL0 N/A
    1016909 9lq8:B (2.85) BS01 rna N/A N/A A0A5C6J4N7 N/A
    1016910 9lq8:B (2.85) BS02 ATP N/A N/A A0A5C6J4N7 N/A
    1016911 9lq8:B (2.85) BS03 SAM N/A N/A A0A5C6J4N7 N/A
    1016912 9lq8:B (2.85) BS04 MN N/A N/A A0A5C6J4N7 N/A
    1016913 9lq8:C (2.85) BS01 rna N/A N/A A0A9X9IKM4 N/A
    1016914 9lq8:C (2.85) BS02 rna N/A N/A A0A9X9IKM4 N/A
    1016915 9lq8:D (2.85) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016916 9lq8:D (2.85) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016917 9lq8:E (2.85) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016918 9lq8:E (2.85) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016919 9lq8:F (2.85) BS01 rna N/A N/A A0A9X9NER2 N/A
    1016920 9lq8:F (2.85) BS02 rna N/A N/A A0A9X9NER2 N/A
    1016921 9lq8:G (2.85) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016922 9lq8:H (2.85) BS01 rna N/A GO:0005737 ... A0A2M9V7H9 N/A
    1016923 9lq8:I (2.85) BS01 rna N/A N/A A0A2M9V7I0 N/A
    1016924 9lq8:I (2.85) BS02 rna N/A N/A A0A2M9V7I0 N/A
    1016925 9lq9:A (2.38) BS01 MN N/A N/A A0A2M9V7I2 N/A
    1016926 9lqa:A (1.91) BS01 A1EL3 N/A N/A A0A2M9V7I2 N/A
    1016927 9lqa:A (1.91) BS02 MN N/A N/A A0A2M9V7I2 N/A
    1016928 9lqb:A (1.93) BS01 A1EL0 N/A N/A A0A2M9V7I2 N/A
    1016929 9lqb:A (1.93) BS02 MN N/A N/A A0A2M9V7I2 N/A
    1016930 9lqc:A (2.37) BS01 A1EL0 N/A N/A A0A2M9V7I2 N/A
    1016931 9lqc:B (2.37) BS01 A1EL0 N/A N/A A0A2M9V7I2 N/A
    1016932 9lqc:C (2.37) BS01 A1EL0 N/A N/A A0A2M9V7I2 N/A
    1016933 9lqc:D (2.37) BS01 A1EL0 N/A N/A A0A2M9V7I2 N/A
    1016934 9lqe:A (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016935 9lqe:A (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016936 9lqe:A (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016937 9lqe:B (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016938 9lqe:B (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016939 9lqe:B (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016940 9lqe:C (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016941 9lqe:C (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016942 9lqe:C (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016943 9lqe:D (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016944 9lqe:D (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016945 9lqe:D (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016946 9lqe:E (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016947 9lqe:E (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016948 9lqe:E (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016949 9lqe:F (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016950 9lqe:F (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016951 9lqe:F (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016952 9lqe:F (1.94) BS04 SAH N/A N/A A5I3U9 N/A
    1016953 9lqe:G (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016954 9lqe:G (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016955 9lqe:G (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016956 9lqe:H (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016957 9lqe:H (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016958 9lqe:H (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016959 9lqe:I (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016960 9lqe:I (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016961 9lqe:J (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016962 9lqe:J (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016963 9lqe:J (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016964 9lqe:K (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016965 9lqe:K (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016966 9lqe:L (1.94) BS01 SAH N/A N/A A5I3U9 N/A
    1016967 9lqe:L (1.94) BS02 SAH N/A N/A A5I3U9 N/A
    1016968 9lqe:L (1.94) BS03 SAH N/A N/A A5I3U9 N/A
    1016969 9lqf:A (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016970 9lqf:A (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016971 9lqf:B (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016972 9lqf:B (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016973 9lqf:C (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016974 9lqf:C (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016975 9lqf:D (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016976 9lqf:D (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016977 9lqf:E (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016978 9lqf:E (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016979 9lqf:F (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016980 9lqf:F (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016981 9lqf:G (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016982 9lqf:G (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016983 9lqf:H (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016984 9lqf:H (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016985 9lqf:I (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016986 9lqf:I (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016987 9lqf:J (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016988 9lqf:J (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016989 9lqf:K (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016990 9lqf:K (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016991 9lqf:L (1.59) BS01 A1EL0 N/A N/A A5I3U9 N/A
    1016992 9lqf:L (1.59) BS02 A1EL0 N/A N/A A5I3U9 N/A
    1016993 9lqg:A (1.28) BS01 A1IJB N/A N/A A5I3U9 N/A
    1016994 9lqg:A (1.28) BS02 A1IJB N/A N/A A5I3U9 N/A
    1016995 9lqg:B (1.28) BS01 A1IJB N/A N/A A5I3U9 N/A
    1016996 9lqg:B (1.28) BS02 A1IJB N/A N/A A5I3U9 N/A
    1016997 9lqg:C (1.28) BS01 A1IJB N/A N/A A5I3U9 N/A
    1016998 9lqg:C (1.28) BS02 A1IJB N/A N/A A5I3U9 N/A
    1016999 9lqh:A (1.47) BS01 A1EL1 N/A N/A A5I3U9 N/A
    1017000 9lqh:A (1.47) BS02 A1EL1 N/A N/A A5I3U9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).