SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1017001 9lqh:B (1.47) BS01 A1EL1 N/A N/A A5I3U9 N/A
    1017002 9lqh:B (1.47) BS02 A1EL1 N/A N/A A5I3U9 N/A
    1017003 9lqh:C (1.47) BS01 A1EL1 N/A N/A A5I3U9 N/A
    1017004 9lqh:C (1.47) BS02 A1EL1 N/A N/A A5I3U9 N/A
    1017005 9lqt:A (2.6) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017006 9lqt:A (2.6) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017007 9lqt:A (2.6) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017008 9lqt:A (2.6) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017009 9lqt:A (2.6) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017010 9lqt:A (2.6) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017011 9lqt:B (2.6) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017012 9lqt:B (2.6) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017013 9lqt:B (2.6) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017014 9lqt:B (2.6) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017015 9lqt:B (2.6) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017016 9lqt:B (2.6) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017017 9lqu:A (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017018 9lqu:A (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017019 9lqu:A (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017020 9lqu:A (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017021 9lqu:A (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017022 9lqu:B (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017023 9lqu:B (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017024 9lqu:B (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017025 9lqu:B (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017026 9lqu:B (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017027 9lqw:A (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017028 9lqw:A (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017029 9lqw:A (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017030 9lqw:A (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017031 9lqw:A (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017032 9lqw:A (2.7) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017033 9lqw:B (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017034 9lqw:B (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017035 9lqw:B (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017036 9lqw:B (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017037 9lqw:B (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017038 9lqw:B (2.7) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017039 9lqx:A (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017040 9lqx:A (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017041 9lqx:A (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017042 9lqx:A (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017043 9lqx:A (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017044 9lqx:A (2.7) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017045 9lqx:B (2.7) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017046 9lqx:B (2.7) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017047 9lqx:B (2.7) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017048 9lqx:B (2.7) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017049 9lqx:B (2.7) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017050 9lqx:B (2.7) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017051 9lqy:A (2.4) BS01 A1EK3 N/A GO:0001568 ... P35414 N/A
    1017052 9lqy:A (2.4) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017053 9lqy:A (2.4) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017054 9lqy:A (2.4) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017055 9lqy:A (2.4) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017056 9lqy:A (2.4) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017057 9lqy:A (2.4) BS07 CLR N/A GO:0001568 ... P35414 N/A
    1017058 9lqy:B (2.4) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017059 9lqy:B (2.4) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017060 9lqy:B (2.4) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017061 9lqy:B (2.4) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017062 9lqy:B (2.4) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017063 9lqy:B (2.4) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017064 9lqy:B (2.4) BS07 A1EK3 N/A GO:0001568 ... P35414 N/A
    1017065 9lqz:A (2.6) BS01 A1EK3 N/A GO:0001568 ... P35414 N/A
    1017066 9lqz:A (2.6) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017067 9lqz:A (2.6) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017068 9lqz:A (2.6) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017069 9lqz:A (2.6) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017070 9lqz:A (2.6) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017071 9lqz:B (2.6) BS01 A1EK3 N/A GO:0001568 ... P35414 N/A
    1017072 9lqz:B (2.6) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017073 9lqz:B (2.6) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017074 9lqz:B (2.6) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017075 9lqz:B (2.6) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017076 9lqz:B (2.6) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017077 9lqz:B (2.6) BS07 CLR N/A GO:0001568 ... P35414 N/A
    1017078 9lqz:B (2.6) BS08 CLR N/A GO:0001568 ... P35414 N/A
    1017079 9lr2:Q (3.1) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017080 9lr2:Q (3.1) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017081 9lr2:Q (3.1) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017082 9lr2:Q (3.1) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017083 9lr2:Q (3.1) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017084 9lr2:Q (3.1) BS06 CLR N/A GO:0001568 ... P35414 N/A
    1017085 9lr2:R (3.1) BS01 CLR N/A GO:0001568 ... P35414 N/A
    1017086 9lr2:R (3.1) BS02 CLR N/A GO:0001568 ... P35414 N/A
    1017087 9lr2:R (3.1) BS03 CLR N/A GO:0001568 ... P35414 N/A
    1017088 9lr2:R (3.1) BS04 CLR N/A GO:0001568 ... P35414 N/A
    1017089 9lr2:R (3.1) BS05 CLR N/A GO:0001568 ... P35414 N/A
    1017090 9lr3:R (2.8) BS01 A1EK3 N/A GO:0001568 ... P35414 N/A
    1017091 9lr4:A (1.7) BS01 ADE N/A GO:0005829 ... Q9YAQ8 N/A
    1017092 9lr5:A (3.099) BS01 CA N/A GO:0005975 ... Q89ZI2 40195893
    1017093 9lr6:A (1.25) BS01 ZN N/A GO:0004064 ... P00918 40355440
    1017094 9lr6:A (1.25) BS02 MNP N/A GO:0004064 ... P00918 40355440
    1017095 9lr9:A (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017096 9lr9:D (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017097 9lr9:F (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017098 9lr9:F (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017099 9lr9:G (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017100 9lr9:G (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017101 9lr9:H (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017102 9lr9:H (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017103 9lr9:I (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017104 9lr9:I (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017105 9lr9:J (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017106 9lr9:J (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017107 9lr9:X (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017108 9lr9:Y (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017109 9lr9:Y (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017110 9lr9:g (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017111 9lr9:h (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017112 9lr9:h (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017113 9lr9:i (3.3) BS01 peptide N/A GO:0005198 ... P03278 40381985
    1017114 9lr9:i (3.3) BS02 peptide N/A GO:0005198 ... P03278 40381985
    1017115 9lrb:R (2.77) BS01 HSM N/A GO:0004930 ... P35367 40579541
    1017116 9lrc:R (2.84) BS01 HSM N/A GO:0004930 ... Q9H3N8 40579541
    1017117 9lrd:R (3.23) BS01 HSM N/A GO:0004930 ... P35367 40579541
    1017118 9lre:R (2.84) BS01 HSM N/A GO:0004930 ... Q9H3N8 40579541
    1017119 9lri:A (2.65) BS01 C5P N/A GO:0003676 ... Q5SL51 40903470
    1017120 9lri:B (2.65) BS01 rna N/A GO:0003676 ... Q5SL51 40903470
    1017121 9lrj:A (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017122 9lrj:A (3.11) BS02 T83 N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017123 9lrj:B (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017124 9lrj:C (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017125 9lrj:C (3.11) BS02 T83 N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017126 9lrj:D (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017127 9lrj:D (3.11) BS02 T83 N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017128 9lrj:E (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017129 9lrj:F (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017130 9lrj:F (3.11) BS02 T83 N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017131 9lrj:G (3.11) BS01 U2F N/A GO:0008194 ... A0A8K1ZRH3 40157902
    1017132 9lro:A (2.20001) BS01 ZN N/A N/A Q08499 41252469
    1017133 9lro:A (2.20001) BS02 A1ELI N/A N/A Q08499 41252469
    1017134 9lro:B (2.20001) BS01 ZN N/A N/A Q08499 41252469
    1017135 9lro:B (2.20001) BS02 A1ELI N/A N/A Q08499 41252469
    1017136 9lrp:A (2.10001) BS01 ZN N/A N/A Q08499 41252469
    1017137 9lrp:A (2.10001) BS02 A1ELB N/A N/A Q08499 41252469
    1017138 9lrp:B (2.10001) BS01 ZN N/A N/A Q08499 41252469
    1017139 9lrp:B (2.10001) BS02 A1ELB N/A N/A Q08499 41252469
    1017140 9lrq:A (1.7) BS01 FAD N/A N/A A0A088D986 41325957
    1017141 9lrq:B (1.7) BS01 FAD N/A N/A A0A088D986 41325957
    1017142 9lrq:C (1.7) BS01 FAD N/A N/A A0A088D986 41325957
    1017143 9lrq:D (1.7) BS01 FAD N/A N/A A0A088D986 41325957
    1017144 9lrr:B (2.68) BS01 FMN N/A GO:0005886 ... A5F5X0 40263754
    1017145 9lrr:B (2.68) BS02 RBF N/A GO:0005886 ... A5F5X0 40263754
    1017146 9lrr:B (2.68) BS03 IQT N/A GO:0005886 ... A5F5X0 40263754
    1017147 9lrr:B (2.68) BS04 FMN N/A GO:0005886 ... A5F5X0 40263754
    1017148 9lrr:C (2.68) BS01 FMN N/A GO:0005886 ... A5F5Y7 40263754
    1017149 9lrr:C (2.68) BS02 CA N/A GO:0005886 ... A5F5Y7 40263754
    1017150 9lrr:D (2.68) BS01 FES N/A GO:0005886 ... A5F5Y6 40263754
    1017151 9lrr:E (2.68) BS01 FES N/A GO:0005886 ... A5F5Y5 40263754
    1017152 9lrr:F (2.68) BS01 FES N/A GO:0005886 ... A5F5Y4 40263754
    1017153 9lrr:F (2.68) BS02 FAD N/A GO:0005886 ... A5F5Y4 40263754
    1017154 9lrs:R (2.83) BS01 A1L7J N/A GO:0004888 ... P0ABE7
    Q96LA9
    N/A
    1017155 9lrv:A (2.99) BS01 dna N/A GO:0000775 ... Q9Y812 41453208
    1017156 9lrv:A (2.99) BS02 dna N/A GO:0000775 ... Q9Y812 41453208
    1017157 9lrv:B (2.99) BS01 dna N/A GO:0000786 ... P09322 41453208
    1017158 9lrv:B (2.99) BS02 dna N/A GO:0000786 ... P09322 41453208
    1017159 9lrv:C (2.99) BS01 dna N/A GO:0000786 ... P04909 41453208
    1017160 9lrv:C (2.99) BS02 dna N/A GO:0000786 ... P04909 41453208
    1017161 9lrv:D (2.99) BS01 dna N/A GO:0000724 ... P04913 41453208
    1017162 9lrv:D (2.99) BS02 dna N/A GO:0000724 ... P04913 41453208
    1017163 9lrv:E (2.99) BS01 dna N/A GO:0000775 ... Q9Y812 41453208
    1017164 9lrv:E (2.99) BS02 dna N/A GO:0000775 ... Q9Y812 41453208
    1017165 9lrv:F (2.99) BS01 dna N/A GO:0000786 ... P09322 41453208
    1017166 9lrv:F (2.99) BS02 dna N/A GO:0000786 ... P09322 41453208
    1017167 9lrv:G (2.99) BS01 dna N/A GO:0000786 ... P04909 41453208
    1017168 9lrv:G (2.99) BS02 dna N/A GO:0000786 ... P04909 41453208
    1017169 9lrv:H (2.99) BS01 dna N/A GO:0000724 ... P04913 41453208
    1017170 9lrv:H (2.99) BS02 dna N/A GO:0000724 ... P04913 41453208
    1017171 9lrw:A (3.04) BS01 dna N/A GO:0000775 ... Q9Y812 41453208
    1017172 9lrw:A (3.04) BS02 dna N/A GO:0000775 ... Q9Y812 41453208
    1017173 9lrw:B (3.04) BS01 dna N/A GO:0000786 ... P09322 41453208
    1017174 9lrw:B (3.04) BS02 dna N/A GO:0000786 ... P09322 41453208
    1017175 9lrw:C (3.04) BS01 dna N/A GO:0000786 ... P04909 41453208
    1017176 9lrw:C (3.04) BS02 dna N/A GO:0000786 ... P04909 41453208
    1017177 9lrw:D (3.04) BS01 dna N/A GO:0000724 ... P04913 41453208
    1017178 9lrw:D (3.04) BS02 dna N/A GO:0000724 ... P04913 41453208
    1017179 9lrw:E (3.04) BS01 dna N/A GO:0000775 ... Q9Y812 41453208
    1017180 9lrw:E (3.04) BS02 dna N/A GO:0000775 ... Q9Y812 41453208
    1017181 9lrw:F (3.04) BS01 dna N/A GO:0000786 ... P09322 41453208
    1017182 9lrw:F (3.04) BS02 dna N/A GO:0000786 ... P09322 41453208
    1017183 9lrw:G (3.04) BS01 dna N/A GO:0000786 ... P04909 41453208
    1017184 9lrw:G (3.04) BS02 dna N/A GO:0000786 ... P04909 41453208
    1017185 9lrw:H (3.04) BS01 dna N/A GO:0000724 ... P04913 41453208
    1017186 9lrw:H (3.04) BS02 dna N/A GO:0000724 ... P04913 41453208
    1017187 9ls7:A (2.49) BS01 ACP N/A GO:0005219 ... Q15413 N/A
    1017188 9ls7:A (2.49) BS02 A1L7G N/A GO:0005219 ... Q15413 N/A
    1017189 9ls7:B (2.49) BS01 ACP N/A GO:0005219 ... Q15413 N/A
    1017190 9ls7:B (2.49) BS02 A1L7G N/A GO:0005219 ... Q15413 N/A
    1017191 9lsa:A (1.62) BS01 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017192 9lsa:B (1.62) BS01 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017193 9lsc:A (1.38) BS01 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017194 9lsc:A (1.38) BS02 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017195 9lsc:B (1.38) BS01 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017196 9lsc:B (1.38) BS02 CA N/A GO:0006091 ... Q9U6Y8 40384617
    1017197 9lsf:A (1.62) BS01 CA N/A GO:0006091 ... A0A4V4ND72 40384617
    1017198 9lsf:B (1.62) BS01 CA N/A GO:0006091 ... A0A4V4ND72 40384617
    1017199 9lsl:A (2.5) BS01 A1ELJ N/A GO:0004114 ... O76074 N/A
    1017200 9lsl:A (2.5) BS02 ZN N/A GO:0004114 ... O76074 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).