SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1018601 9lvt:B (1.9) BS01 A1L7Q N/A GO:0008233 ... P0DTC1 40616520
    1018602 9lvv:A (1.9) BS01 A1L7R N/A GO:0008233 ... P0DTC1 40616520
    1018603 9lvw:A (3.41) BS01 LMN N/A GO:0005515 ... O43826 N/A
    1018604 9lvw:A (3.41) BS02 LMN N/A GO:0005515 ... O43826 N/A
    1018605 9lvz:A (1.59) BS01 ADE N/A GO:0005829 ... Q9YAQ8 N/A
    1018606 9lw0:A (2.12) BS01 HEM N/A N/A A7HYW5 N/A
    1018607 9lw1:A (2.5) BS01 LPC N/A GO:0016020 ... Q5U3C3 41422090
    1018608 9lw1:A (2.5) BS02 CLR N/A GO:0016020 ... Q5U3C3 41422090
    1018609 9lw1:A (2.5) BS03 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018610 9lw1:A (2.5) BS04 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018611 9lw1:A (2.5) BS05 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018612 9lw1:A (2.5) BS06 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018613 9lw1:B (2.5) BS01 LPC N/A GO:0016020 ... Q5U3C3 41422090
    1018614 9lw1:B (2.5) BS02 CLR N/A GO:0016020 ... Q5U3C3 41422090
    1018615 9lw1:B (2.5) BS03 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018616 9lw1:B (2.5) BS04 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018617 9lw1:B (2.5) BS05 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018618 9lw1:B (2.5) BS06 4I1 N/A GO:0016020 ... Q5U3C3 41422090
    1018619 9lw5:R (2.87) BS01 LDP N/A N/A P07550 N/A
    1018620 9lwb:A (1.62) BS01 ADE N/A GO:0005829 ... Q9YAQ8 N/A
    1018621 9lwc:B (2.9) BS01 peptide N/A N/A P62873 N/A
    1018622 9lwc:R (2.9) BS01 ALE N/A N/A P21728 N/A
    1018623 9lwf:A (3.41) BS01 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018624 9lwf:A (3.41) BS02 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018625 9lwf:A (3.41) BS03 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018626 9lwf:A (3.41) BS04 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018627 9lwf:B (3.41) BS01 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018628 9lwf:B (3.41) BS02 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018629 9lwf:B (3.41) BS03 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018630 9lwf:C (3.41) BS01 ZN N/A GO:0005515 ... Q96S15 40742811
    1018631 9lwf:C (3.41) BS02 ZN N/A GO:0005515 ... Q96S15 40742811
    1018632 9lwf:D (3.41) BS01 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018633 9lwf:D (3.41) BS02 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018634 9lwf:D (3.41) BS03 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018635 9lwf:D (3.41) BS04 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018636 9lwf:I (3.41) BS01 ZN N/A GO:0005515 ... Q96S15 40742811
    1018637 9lwf:I (3.41) BS02 ZN N/A GO:0005515 ... Q96S15 40742811
    1018638 9lwf:I (3.41) BS03 ZN N/A GO:0005515 ... Q96S15 40742811
    1018639 9lwf:I (3.41) BS04 ZN N/A GO:0005515 ... Q96S15 40742811
    1018640 9lwf:K (3.41) BS01 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018641 9lwf:K (3.41) BS02 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018642 9lwf:K (3.41) BS03 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018643 9lwf:K (3.41) BS04 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018644 9lwf:L (3.41) BS01 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018645 9lwf:L (3.41) BS02 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018646 9lwf:L (3.41) BS03 ZN N/A GO:0005515 ... Q9NXC5 40742811
    1018647 9lwf:N (3.41) BS01 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018648 9lwf:N (3.41) BS02 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018649 9lwf:N (3.41) BS03 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018650 9lwf:N (3.41) BS04 ZN N/A GO:0005515 ... Q6PJI9 40742811
    1018651 9lwm:A (2.026) BS01 FAD N/A N/A N/A N/A
    1018652 9lwm:B (2.026) BS01 FAD N/A N/A N/A N/A
    1018653 9lwn:A (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018654 9lwn:A (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018655 9lwn:A (3.26) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1018656 9lwn:B (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018657 9lwn:B (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018658 9lwn:B (3.26) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1018659 9lwn:B (3.26) BS04 MG N/A GO:0004176 ... P28737 N/A
    1018660 9lwn:C (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018661 9lwn:C (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018662 9lwn:C (3.26) BS03 MG N/A GO:0004176 ... P28737 N/A
    1018663 9lwn:C (3.26) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1018664 9lwn:D (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018665 9lwn:D (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018666 9lwn:D (3.26) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1018667 9lwn:E (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018668 9lwn:E (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018669 9lwn:E (3.26) BS03 MG N/A GO:0004176 ... P28737 N/A
    1018670 9lwn:E (3.26) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1018671 9lwn:F (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018672 9lwn:F (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018673 9lwn:F (3.26) BS03 MG N/A GO:0004176 ... P28737 N/A
    1018674 9lwn:F (3.26) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1018675 9lwn:G (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018676 9lwn:G (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018677 9lwn:G (3.26) BS03 MG N/A GO:0004176 ... P28737 N/A
    1018678 9lwn:G (3.26) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1018679 9lwn:H (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018680 9lwn:H (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018681 9lwn:H (3.26) BS03 MG N/A GO:0004176 ... P28737 N/A
    1018682 9lwn:H (3.26) BS04 ATP N/A GO:0004176 ... P28737 N/A
    1018683 9lwn:I (3.26) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1018684 9lwn:I (3.26) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1018685 9lwq:A (3.17) BS01 QIH N/A GO:0001944 ... P42336 40968123
    1018686 9lwu:C (3.5) BS01 MAN N/A N/A Q9UBV2 40593878
    1018687 9lwu:D (3.5) BS01 MAN N/A N/A Q9UBV2 40593878
    1018688 9lwu:E (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 40593878
    1018689 9lwu:F (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 40593878
    1018690 9lww:A (1.7) BS01 FMN N/A N/A A0A0B2E3F3 40811148
    1018691 9lww:A (1.7) BS02 SF4 N/A N/A A0A0B2E3F3 40811148
    1018692 9lww:A (1.7) BS03 A1EMD N/A N/A A0A0B2E3F3 40811148
    1018693 9lwy:A (1.55) BS01 A1EMB N/A GO:0000122 ... P61964 N/A
    1018694 9lwz:A (2.074) BS01 FAD N/A N/A N/A N/A
    1018695 9lwz:B (2.074) BS01 FAD N/A N/A N/A N/A
    1018696 9lx5:A (3.6) BS01 ATP N/A GO:0001614 ... P51575 40175702
    1018697 9lx5:A (3.6) BS02 CLR N/A GO:0001614 ... P51575 40175702
    1018698 9lx5:A (3.6) BS03 ATP N/A GO:0001614 ... P51575 40175702
    1018699 9lx5:B (3.6) BS01 ATP N/A GO:0001614 ... P51575 40175702
    1018700 9lx5:B (3.6) BS02 ATP N/A GO:0001614 ... P51575 40175702
    1018701 9lx5:C (3.6) BS01 ATP N/A GO:0001614 ... P51575 40175702
    1018702 9lx5:C (3.6) BS02 ATP N/A GO:0001614 ... P51575 40175702
    1018703 9lx5:C (3.6) BS03 CLR N/A GO:0001614 ... P51575 40175702
    1018704 9lxc:A (3.1) BS01 CLR N/A GO:0001614 ... P51575 40175702
    1018705 9lxc:A (3.1) BS02 A1ALI N/A GO:0001614 ... P51575 40175702
    1018706 9lxc:A (3.1) BS03 A1ALI N/A GO:0001614 ... P51575 40175702
    1018707 9lxc:B (3.1) BS01 A1ALI N/A GO:0001614 ... P51575 40175702
    1018708 9lxc:B (3.1) BS02 A1ALI N/A GO:0001614 ... P51575 40175702
    1018709 9lxc:C (3.1) BS01 A1ALI N/A GO:0001614 ... P51575 40175702
    1018710 9lxc:C (3.1) BS02 CLR N/A GO:0001614 ... P51575 40175702
    1018711 9lxc:C (3.1) BS03 A1ALI N/A GO:0001614 ... P51575 40175702
    1018712 9lxd:2 (3.27) BS01 ATP N/A GO:0000228 ... P49736 N/A
    1018713 9lxd:3 (3.27) BS01 ADP N/A GO:0000727 ... P25205 N/A
    1018714 9lxd:4 (3.27) BS01 ADP N/A GO:0000727 ... P33991 N/A
    1018715 9lxd:4 (3.27) BS02 ADP N/A GO:0000727 ... P33991 N/A
    1018716 9lxd:6 (3.27) BS01 ADP N/A GO:0000727 ... Q14566 N/A
    1018717 9lxd:7 (3.27) BS01 ADP N/A GO:0000727 ... P33993 N/A
    1018718 9lxe:2 (3.96) BS01 ATP N/A GO:0000228 ... P49736 N/A
    1018719 9lxe:3 (3.96) BS01 ADP N/A GO:0000727 ... P25205 N/A
    1018720 9lxe:3 (3.96) BS02 ADP N/A GO:0000727 ... P25205 N/A
    1018721 9lxe:4 (3.96) BS01 ADP N/A GO:0000727 ... P33991 N/A
    1018722 9lxe:4 (3.96) BS02 ADP N/A GO:0000727 ... P33991 N/A
    1018723 9lxe:6 (3.96) BS01 ADP N/A GO:0000727 ... Q14566 N/A
    1018724 9lxe:7 (3.96) BS01 ADP N/A GO:0000727 ... P33993 N/A
    1018725 9lxe:A (3.96) BS01 ADP N/A GO:0000727 ... P33993 N/A
    1018726 9lxe:D (3.96) BS01 ATP N/A GO:0000228 ... P49736 N/A
    1018727 9lxe:E (3.96) BS01 ADP N/A GO:0000727 ... P25205 N/A
    1018728 9lxe:E (3.96) BS02 ADP N/A GO:0000727 ... P25205 N/A
    1018729 9lxe:F (3.96) BS01 ADP N/A GO:0000727 ... P33991 N/A
    1018730 9lxe:F (3.96) BS02 ADP N/A GO:0000727 ... P33991 N/A
    1018731 9lxe:G (3.96) BS01 ADP N/A GO:0000727 ... Q14566 N/A
    1018732 9lxf:2 (3.86) BS01 ATP N/A GO:0000228 ... P49736 N/A
    1018733 9lxf:3 (3.86) BS01 ATP N/A GO:0000727 ... P25205 N/A
    1018734 9lxf:4 (3.86) BS01 ADP N/A GO:0000727 ... P33991 N/A
    1018735 9lxf:6 (3.86) BS01 ATP N/A GO:0000727 ... Q14566 N/A
    1018736 9lxf:6 (3.86) BS02 ADP N/A GO:0000727 ... Q14566 N/A
    1018737 9lxf:D (3.86) BS01 ATP N/A GO:0000228 ... P49736 N/A
    1018738 9lxf:E (3.86) BS01 ATP N/A GO:0000727 ... P25205 N/A
    1018739 9lxf:F (3.86) BS01 ADP N/A GO:0000727 ... P33991 N/A
    1018740 9lxf:G (3.86) BS01 ATP N/A GO:0000727 ... Q14566 N/A
    1018741 9lxf:G (3.86) BS02 ADP N/A GO:0000727 ... Q14566 N/A
    1018742 9lxg:A (2.46) BS01 peptide N/A GO:0030036 ... P21333 40466905
    1018743 9lxl:A (2.191) BS01 AZI N/A GO:0004560 ... A0A365NIL9 40782452
    1018744 9lxl:A (2.191) BS02 AZI N/A GO:0004560 ... A0A365NIL9 40782452
    1018745 9lxn:3 (3.3) BS01 dna N/A GO:0000978 ... Q92966 40468065
    1018746 9lxn:3 (3.3) BS02 dna N/A GO:0000978 ... Q92966 40468065
    1018747 9lxn:4 (3.3) BS01 dna N/A GO:0000978 ... Q5SXM2 40468065
    1018748 9lxn:4 (3.3) BS02 dna N/A GO:0000978 ... Q5SXM2 40468065
    1018749 9lxn:A (3.3) BS01 dna N/A GO:0000287 ... O14802 40468065
    1018750 9lxn:A (3.3) BS02 dna N/A GO:0000287 ... O14802 40468065
    1018751 9lxn:A (3.3) BS03 rna N/A GO:0000287 ... O14802 40468065
    1018752 9lxn:A (3.3) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1018753 9lxn:A (3.3) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1018754 9lxn:A (3.3) BS06 MG N/A GO:0000287 ... O14802 40468065
    1018755 9lxn:B (3.3) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1018756 9lxn:B (3.3) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1018757 9lxn:B (3.3) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1018758 9lxn:B (3.3) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1018759 9lxn:I (3.3) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1018760 9lxn:J (3.3) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1018761 9lxn:L (3.3) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1018762 9lxn:P (3.3) BS01 dna N/A GO:0003690 ... Q9H1D9 40468065
    1018763 9lxn:P (3.3) BS02 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1018764 9lxn:U (3.3) BS01 dna N/A GO:0000785 ... P20226 40468065
    1018765 9lxn:U (3.3) BS02 dna N/A GO:0000785 ... P20226 40468065
    1018766 9lxn:V (3.3) BS01 dna N/A GO:0000126 ... Q9HAW0 40468065
    1018767 9lxn:V (3.3) BS02 dna N/A GO:0000126 ... Q9HAW0 40468065
    1018768 9lxn:V (3.3) BS03 ZN N/A GO:0000126 ... Q9HAW0 40468065
    1018769 9lxn:W (3.3) BS01 dna N/A GO:0000126 ... A6H8Y1 40468065
    1018770 9lxn:W (3.3) BS02 dna N/A GO:0000126 ... A6H8Y1 40468065
    1018771 9lxo:A (3.6) BS01 dna N/A GO:0000287 ... O14802 40468065
    1018772 9lxo:A (3.6) BS02 dna N/A GO:0000287 ... O14802 40468065
    1018773 9lxo:A (3.6) BS03 rna N/A GO:0000287 ... O14802 40468065
    1018774 9lxo:A (3.6) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1018775 9lxo:A (3.6) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1018776 9lxo:A (3.6) BS06 MG N/A GO:0000287 ... O14802 40468065
    1018777 9lxo:B (3.6) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1018778 9lxo:B (3.6) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1018779 9lxo:B (3.6) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1018780 9lxo:B (3.6) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1018781 9lxo:I (3.6) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1018782 9lxo:J (3.6) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1018783 9lxo:L (3.6) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1018784 9lxo:P (3.6) BS01 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1018785 9lxq:A (1.37) BS01 MTA N/A GO:0005829 ... Q9YAQ8 N/A
    1018786 9lye:A (1.37) BS01 ADE N/A GO:0005829 ... Q9YAQ8 N/A
    1018787 9lyf:A (2.58) BS01 A1L7W N/A GO:0004843 ... Q70CQ3 40274689
    1018788 9lyf:A (2.58) BS02 ZN N/A GO:0004843 ... Q70CQ3 40274689
    1018789 9lyg:A (1.26) BS01 A1L7S N/A GO:0003007 ... P62942 N/A
    1018790 9lym:AA (2.15) BS01 COA N/A N/A N/A N/A
    1018791 9lym:BA (2.15) BS01 COA N/A N/A N/A N/A
    1018792 9lym:DA (2.15) BS01 COA N/A N/A N/A N/A
    1018793 9lyv:A (1.52) BS01 dna N/A N/A Q99811 41473960
    1018794 9lyv:A (1.52) BS02 dna N/A N/A Q99811 41473960
    1018795 9lyv:D (1.52) BS01 dna N/A N/A Q99811 41473960
    1018796 9lyv:D (1.52) BS02 dna N/A N/A Q99811 41473960
    1018797 9lyv:D (1.52) BS03 dna N/A N/A Q99811 41473960
    1018798 9lyv:G (1.52) BS01 dna N/A N/A Q99811 41473960
    1018799 9lyv:G (1.52) BS02 dna N/A N/A Q99811 41473960
    1018800 9lyy:A (1.6) BS01 ADP N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).