SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10001 1dva:M (3.0) BS02 CA 3.4.21.21 GO:0005509 ... P08709 10761907
    10002 1dvb:A (1.9) BS01 FE ? GO:0005506 ... P24931 10968622
    10003 1dvb:A (1.9) BS02 FE ? GO:0005506 ... P24931 10968622
    10004 1dvb:A (1.9) BS03 ZN ? GO:0005506 ... P24931 10968622
    10005 1dve:A (2.4) BS01 HEM 1.14.14.18 GO:0001525 ... P06762 10760513
    10006 1dvf:B (1.9) BS01 ZN ? GO:0003823 ... P01820 8950273
    10007 1dvf:D (1.9) BS01 ZN ? GO:0005576 ... A0NA69 8950273
    10008 1dvg:A (2.2) BS01 HEM 1.14.14.18 GO:0001525 ... P06762 10760513
    10009 1dvg:B (2.2) BS01 HEM 1.14.14.18 GO:0001525 ... P06762 10760513
    10010 1dvh:A (-1.00) BS01 HEC ? GO:0009055 ... P04032 7844834
    10011 1dvi:A (2.3) BS01 CA ? GO:0005509 ... Q64537 9228945
    10012 1dvi:A (2.3) BS02 CA ? GO:0005509 ... Q64537 9228945
    10013 1dvi:A (2.3) BS03 CA ? GO:0005509 ... Q64537 9228945
    10014 1dvi:A (2.3) BS04 CA ? GO:0005509 ... Q64537 9228945
    10015 1dvi:B (2.3) BS01 CA ? GO:0005509 ... Q64537 9228945
    10016 1dvi:B (2.3) BS02 CA ? GO:0005509 ... Q64537 9228945
    10017 1dvi:B (2.3) BS03 CA ? GO:0005509 ... Q64537 9228945
    10018 1dvi:B (2.3) BS04 CA ? GO:0005509 ... Q64537 9228945
    10019 1dvj:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    10020 1dvj:B (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    10021 1dvj:C (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    10022 1dvj:D (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    10023 1dvm:A (2.4) BS01 CL ? GO:0001525 ... P05121 10913251
    10024 1dvm:C (2.4) BS01 CL ? GO:0001525 ... P05121 10913251
    10025 1dvm:D (2.4) BS01 CL ? GO:0001525 ... P05121 10913251
    10026 1dvp:A (2.0) BS01 ZN ? GO:0035091 ... Q960X8 10693761
    10027 1dvp:A (2.0) BS02 ZN ? GO:0035091 ... Q960X8 10693761
    10028 1dvr:A (2.36) BS01 ATF 2.7.4.3 GO:0003688 ... P07170 8594191
    10029 1dvr:A (2.36) BS02 ATF 2.7.4.3 GO:0003688 ... P07170 8594191
    10030 1dvr:B (2.36) BS01 ATF 2.7.4.3 GO:0003688 ... P07170 8594191
    10031 1dvr:B (2.36) BS02 ATF 2.7.4.3 GO:0003688 ... P07170 8594191
    10032 1dvs:A (2.0) BS01 STL ? GO:0001523 ... P02766 10742177 BindingDB: Kd=470nM
    10033 1dvt:A (1.9) BS01 FLP ? GO:0001523 ... P02766 10742177
    10034 1dvu:A (1.9) BS01 DBF ? GO:0001523 ... P02766 10742177
    10035 1dvv:A (-1.00) BS01 HEM ? GO:0005506 ... P00099 10918067
    10036 1dvx:A (2.0) BS01 DIF ? GO:0001523 ... P02766 10742177 BindingDB: Kd=1000nM, IC50=140000nM
    10037 1dvy:A (1.9) BS01 BPD ? GO:0001523 ... P02766 10742177
    10038 1dvz:A (1.9) BS01 OFL ? GO:0001523 ... P02766 10742177 MOAD: Kd=78nM
    10039 1dw0:A (1.82) BS01 HEC ? GO:0009055 ... P81238 10821858
    10040 1dw0:B (1.82) BS01 HEC ? GO:0009055 ... P81238 10821858
    10041 1dw0:C (1.82) BS01 HEC ? GO:0009055 ... P81238 10821858
    10042 1dw1:A (1.9) BS01 CYN ? GO:0009055 ... P81238 10821858
    10043 1dw1:A (1.9) BS02 HEC ? GO:0009055 ... P81238 10821858
    10044 1dw1:B (1.9) BS01 CYN ? GO:0009055 ... P81238 10821858
    10045 1dw1:B (1.9) BS02 HEC ? GO:0009055 ... P81238 10821858
    10046 1dw1:C (1.9) BS01 CYN ? GO:0009055 ... P81238 10821858
    10047 1dw1:C (1.9) BS02 HEC ? GO:0009055 ... P81238 10821858
    10048 1dw2:A (2.2) BS01 HEM ? GO:0009055 ... P81238 10821858
    10049 1dw2:A (2.2) BS02 NO ? GO:0009055 ... P81238 10821858
    10050 1dw2:B (2.2) BS01 HEM ? GO:0009055 ... P81238 10821858
    10051 1dw2:B (2.2) BS02 NO ? GO:0009055 ... P81238 10821858
    10052 1dw2:C (2.2) BS01 HEM ? GO:0009055 ... P81238 10821858
    10053 1dw2:C (2.2) BS02 NO ? GO:0009055 ... P81238 10821858
    10054 1dw3:A (2.1) BS01 HEC ? GO:0009055 ... P81238 10821858
    10055 1dw3:B (2.1) BS01 HEC ? GO:0009055 ... P81238 10821858
    10056 1dw3:C (2.1) BS01 HEC ? GO:0009055 ... P81238 10821858
    10057 1dw6:C (1.88) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 10429209
    10058 1dw6:D (1.88) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 10429209
    10059 1dwa:M (2.0) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10060 1dwb:H (3.16) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10061 1dwb:H (3.16) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10062 1dwb:H (3.16) BS03 BEN 3.4.21.5 GO:0004252 ... P00734 1939071
    10063 1dwc:H (3.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10064 1dwc:H (3.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10065 1dwc:H (3.0) BS03 MIT 3.4.21.5 GO:0004252 ... P00734 1939071
    10066 1dwd:H (3.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10067 1dwd:H (3.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10068 1dwd:H (3.0) BS03 MID 3.4.21.5 GO:0004252 ... P00734 1939071 BindingDB: Ki=6nM, IC50=690nM, EC50=750nM
    10069 1dwe:H (3.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10070 1dwe:H (3.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1939071
    10071 1dwe:H (3.0) BS03 0G6 3.4.21.5 GO:0004252 ... P00734 1939071
    10072 1dwf:M (2.0) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10073 1dwg:M (2.0) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10074 1dwh:M (2.0) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10075 1dwi:M (2.0) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10076 1dwj:M (2.4) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 10713520
    10077 1dwk:A (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10078 1dwk:B (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10079 1dwk:C (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10080 1dwk:D (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10081 1dwk:E (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10082 1dwk:F (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10083 1dwk:G (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10084 1dwk:H (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10085 1dwk:I (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10086 1dwk:J (1.65) BS01 OXL 4.2.1.104 GO:0003677 ... P00816 10801492
    10087 1dwl:A (-1.00) BS01 SF4 ? N/A P07485 10704202
    10088 1dwl:B (-1.00) BS01 HEC ? GO:0042597 ... P04032 10704202
    10089 1dwo:A (2.2) BS01 ACN 4.1.2.47 GO:0003824 ... P52705 11173464
    10090 1dwq:A (2.2) BS01 ATO 4.1.2.47 GO:0003824 ... P52705 11173464
    10091 1dwr:A (1.45) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 10706294
    10092 1dwr:A (1.45) BS02 CMO 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 10706294
    10093 1dws:A (1.45) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 10706294
    10094 1dws:A (1.45) BS02 CMO 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 10706294
    10095 1dwt:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 10706294
    10096 1dwv:A (2.35) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10097 1dwv:A (2.35) BS02 4AB 1.14.13.39 GO:0004517 ... P29477 10769116
    10098 1dwv:A (2.35) BS03 ZN 1.14.13.39 GO:0004517 ... P29477 10769116
    10099 1dwv:A (2.35) BS04 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10100 1dwv:B (2.35) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10101 1dwv:B (2.35) BS02 4AB 1.14.13.39 GO:0004517 ... P29477 10769116
    10102 1dwv:B (2.35) BS03 ZN 1.14.13.39 GO:0004517 ... P29477 10769116
    10103 1dwv:B (2.35) BS04 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10104 1dww:A (2.35) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10105 1dww:A (2.35) BS02 H2B 1.14.13.39 GO:0004517 ... P29477 10769116
    10106 1dww:A (2.35) BS03 ZN 1.14.13.39 GO:0004517 ... P29477 10769116
    10107 1dww:A (2.35) BS04 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10108 1dww:B (2.35) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10109 1dww:B (2.35) BS02 H2B 1.14.13.39 GO:0004517 ... P29477 10769116
    10110 1dww:B (2.35) BS03 ZN 1.14.13.39 GO:0004517 ... P29477 10769116
    10111 1dww:B (2.35) BS04 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10112 1dwx:A (2.6) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10113 1dwx:A (2.6) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 10769116
    10114 1dwx:A (2.6) BS03 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10115 1dwx:B (2.6) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10769116
    10116 1dwx:B (2.6) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 10769116
    10117 1dwx:B (2.6) BS03 HAR 1.14.13.39 GO:0004517 ... P29477 10769116
    10118 1dx5:I (2.3) BS01 CA ? GO:0004888 ... P07204 10761923
    10119 1dx5:J (2.3) BS01 CA ? GO:0004888 ... P07204 10761923
    10120 1dx5:K (2.3) BS01 CA ? GO:0004888 ... P07204 10761923
    10121 1dx5:L (2.3) BS01 CA ? GO:0004888 ... P07204 10761923
    10122 1dx5:M (2.3) BS01 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10123 1dx5:M (2.3) BS02 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10124 1dx5:M (2.3) BS03 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10125 1dx5:M (2.3) BS04 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10126 1dx5:N (2.3) BS01 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10127 1dx5:N (2.3) BS02 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10128 1dx5:N (2.3) BS03 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10129 1dx5:N (2.3) BS04 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10130 1dx5:O (2.3) BS01 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10131 1dx5:O (2.3) BS02 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10132 1dx5:O (2.3) BS03 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10133 1dx5:O (2.3) BS04 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10134 1dx5:P (2.3) BS01 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10135 1dx5:P (2.3) BS02 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10136 1dx5:P (2.3) BS03 0GJ 3.4.21.5 GO:0004252 ... P00734 10761923
    10137 1dx6:A (2.3) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 10606746 MOAD: ic50=652nM
    BindingDB: IC50=1069nM, Ki=1.9e+2nM
    10138 1dx8:A (-1.00) BS01 ZN ? GO:0005506 ... Q9XG40 10975569
    10139 1dxc:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10681426
    10140 1dxc:A (1.4) BS02 CMO 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10681426
    10141 1dxd:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10681426
    10142 1dxe:A (1.8) BS01 PO4 4.1.2.20 GO:0000287 ... P23522 10921867
    10143 1dxe:A (1.8) BS02 MG 4.1.2.20 GO:0000287 ... P23522 10921867
    10144 1dxe:B (1.8) BS01 PO4 4.1.2.20 GO:0000287 ... P23522 10921867
    10145 1dxe:B (1.8) BS02 MG 4.1.2.20 GO:0000287 ... P23522 10921867
    10146 1dxf:A (2.6) BS01 PYR 4.1.2.20 GO:0000287 ... P23522 10921867
    10147 1dxf:A (2.6) BS02 MG 4.1.2.20 GO:0000287 ... P23522 10921867
    10148 1dxf:B (2.6) BS01 PYR 4.1.2.20 GO:0000287 ... P23522 10921867
    10149 1dxf:B (2.6) BS02 MG 4.1.2.20 GO:0000287 ... P23522 10921867
    10150 1dxg:A (1.8) BS01 FE ? GO:0005506 ... P00273 7666420
    10151 1dxg:B (1.8) BS01 FE ? GO:0005506 ... P00273 7666420
    10152 1dxi:A (2.6) BS01 MG 5.3.1.5 GO:0000287 ... P37031 15299450
    10153 1dxi:A (2.6) BS02 MG 5.3.1.5 GO:0000287 ... P37031 15299450
    10154 1dxi:B (2.6) BS01 MG 5.3.1.5 GO:0000287 ... P37031 15299450
    10155 1dxi:B (2.6) BS02 MG 5.3.1.5 GO:0000287 ... P37031 15299450
    10156 1dxk:A (1.85) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 10933508
    10157 1dxk:A (1.85) BS02 BCT 3.5.2.6 GO:0008270 ... P04190 10933508
    10158 1dxl:A (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    10159 1dxl:B (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    10160 1dxl:C (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    10161 1dxl:D (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    10162 1dxm:A (2.6) BS01 RED ? GO:0005960 ... P16048 10806386
    10163 1dxm:B (2.6) BS01 RED ? GO:0005960 ... P16048 10806386
    10164 1dxo:A (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10165 1dxo:A (2.5) BS02 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10166 1dxo:A (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10167 1dxo:A (2.5) BS04 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10168 1dxo:B (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10169 1dxo:B (2.5) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10170 1dxo:B (2.5) BS03 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10171 1dxo:C (2.5) BS01 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10172 1dxo:C (2.5) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10173 1dxo:C (2.5) BS03 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10174 1dxo:D (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10175 1dxo:D (2.5) BS02 DQN 1.6.5.2 GO:0000209 ... P15559 10706635
    10176 1dxo:D (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    10177 1dxp:A (2.4) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26662 10702283
    10178 1dxp:A (2.4) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26662 10702283
    10179 1dxp:B (2.4) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26662 10702283
    10180 1dxp:B (2.4) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26662 10702283
    10181 1dxq:A (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10182 1dxq:A (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10183 1dxq:B (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10184 1dxq:B (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10185 1dxq:C (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10186 1dxq:C (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10187 1dxq:D (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10188 1dxq:D (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    10189 1dxr:C (2.0) BS01 HEC ? GO:0005506 ... P07173 11005826
    10190 1dxr:C (2.0) BS02 HEC ? GO:0005506 ... P07173 11005826
    10191 1dxr:C (2.0) BS03 HEC ? GO:0005506 ... P07173 11005826
    10192 1dxr:C (2.0) BS04 HEC ? GO:0005506 ... P07173 11005826
    10193 1dxr:L (2.0) BS01 BCB ? GO:0009772 ... P06009 11005826
    10194 1dxr:L (2.0) BS02 BCB ? GO:0009772 ... P06009 11005826
    10195 1dxr:L (2.0) BS03 BPB ? GO:0009772 ... P06009 11005826
    10196 1dxr:L (2.0) BS04 FE2 ? GO:0009772 ... P06009 11005826
    10197 1dxr:L (2.0) BS05 MQ9 ? GO:0009772 ... P06009 11005826
    10198 1dxr:L (2.0) BS06 MST ? GO:0009772 ... P06009 11005826
    10199 1dxr:L (2.0) BS07 BCB ? GO:0009772 ... P06009 11005826
    10200 1dxr:L (2.0) BS08 BPB ? GO:0009772 ... P06009 11005826

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).