SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    101801 2q1t:A (1.75) BS02 UDP ? N/A O87989 17950751
    101802 2q1u:A (1.7) BS01 NAD ? N/A O87989 17950751
    101803 2q1u:A (1.7) BS02 UDP ? N/A O87989 17950751
    101804 2q1u:B (1.7) BS01 NAD ? N/A O87989 17950751
    101805 2q1u:B (1.7) BS02 UDP ? N/A O87989 17950751
    101806 2q1v:A (1.95) BS01 PDN N/A N/A N/A 17702911
    101807 2q1w:A (2.19) BS01 NAD ? N/A O87987 17950751
    101808 2q1w:B (2.19) BS01 NAD ? N/A O87987 17950751
    101809 2q1w:C (2.19) BS01 NAD ? N/A O87987 17950751
    101810 2q1y:A (2.3) BS01 GSP ? GO:0000287 ... P9WN95 N/A
    101811 2q1z:B (2.4) BS01 ZN ? N/A P40685 17803943
    101812 2q1z:B (2.4) BS02 ZN ? N/A P40685 17803943
    101813 2q1z:D (2.4) BS01 ZN ? N/A P40685 17803943
    101814 2q1z:D (2.4) BS02 ZN ? N/A P40685 17803943
    101815 2q21:A (2.2) BS01 GDP 3.6.5.2 GO:0000139 ... P01112 1899707
    101816 2q27:A (2.12) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101817 2q27:A (2.12) BS02 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101818 2q27:B (2.12) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101819 2q27:B (2.12) BS02 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101820 2q28:A (1.74) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101821 2q28:A (1.74) BS02 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101822 2q28:A (1.74) BS03 ADP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101823 2q28:B (1.74) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101824 2q28:B (1.74) BS02 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101825 2q28:B (1.74) BS03 ADP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101826 2q29:A (1.82) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101827 2q29:A (1.82) BS02 ACO 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101828 2q29:A (1.82) BS03 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101829 2q29:B (1.82) BS01 MG 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101830 2q29:B (1.82) BS02 ACO 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101831 2q29:B (1.82) BS03 TPP 4.1.1.8 GO:0000287 ... P0AFI0 20553497
    101832 2q2a:A (1.79) BS01 ARG ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.039uM
    101833 2q2a:B (1.79) BS01 ARG ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.039uM
    101834 2q2a:C (1.79) BS01 ARG ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.039uM
    101835 2q2a:D (1.79) BS01 ARG ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.039uM
    101836 2q2c:A (2.35) BS01 HIS ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.42uM
    101837 2q2c:B (2.35) BS01 HIS ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.42uM
    101838 2q2c:C (2.35) BS01 HIS ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.42uM
    101839 2q2c:D (2.35) BS01 HIS ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.42uM
    101840 2q2k:A (3.0) BS01 dna ? N/A O87365 18097417
    101841 2q2k:B (3.0) BS01 dna ? N/A O87365 18097417
    101842 2q2l:A (2.367) BS01 ZN 1.15.1.1 GO:0004784 ... B2CP37 17642520
    101843 2q2l:A (2.367) BS02 IOD 1.15.1.1 GO:0004784 ... B2CP37 17642520
    101844 2q2l:B (2.367) BS01 ZN 1.15.1.1 GO:0004784 ... B2CP37 17642520
    101845 2q2n:A (1.8) BS01 H01 4.99.1.9 GO:0004325 ... P32396 18423489
    101846 2q2o:A (2.1) BS01 H01 4.99.1.9 GO:0004325 ... P32396 18423489
    101847 2q2q:C (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101848 2q2q:D (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101849 2q2q:E (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101850 2q2q:F (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101851 2q2q:G (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101852 2q2q:H (2.02) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101853 2q2r:A (2.1) BS01 BGC 2.7.1.2 GO:0004340 ... Q4E4E1 17761195
    101854 2q2r:A (2.1) BS02 ADP 2.7.1.2 GO:0004340 ... Q4E4E1 17761195
    101855 2q2r:B (2.1) BS01 BGC 2.7.1.2 GO:0004340 ... Q4E4E1 17761195
    101856 2q2r:B (2.1) BS02 ADP 2.7.1.2 GO:0004340 ... Q4E4E1 17761195
    101857 2q2t:A (2.3) BS01 dna ? GO:0000166 ... O41026 17618295
    101858 2q2t:A (2.3) BS02 dna ? GO:0000166 ... O41026 17618295
    101859 2q2t:A (2.3) BS03 dna ? GO:0000166 ... O41026 17618295
    101860 2q2t:A (2.3) BS04 AMP ? GO:0000166 ... O41026 17618295
    101861 2q2u:A (3.0) BS01 dna ? GO:0000166 ... O41026 17618295
    101862 2q2u:A (3.0) BS02 dna ? GO:0000166 ... O41026 17618295
    101863 2q2u:B (3.0) BS01 dna ? GO:0000166 ... O41026 17618295
    101864 2q2u:B (3.0) BS02 dna ? GO:0000166 ... O41026 17618295
    101865 2q2u:C (3.0) BS01 dna ? GO:0000166 ... O41026 17618295
    101866 2q2u:C (3.0) BS02 dna ? GO:0000166 ... O41026 17618295
    101867 2q2u:D (3.0) BS01 dna ? GO:0000166 ... O41026 17618295
    101868 2q2u:D (3.0) BS02 dna ? GO:0000166 ... O41026 17618295
    101869 2q2v:B (1.9) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101870 2q2v:C (1.9) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101871 2q2v:D (1.9) BS01 NAD 1.1.1.30 GO:0003858 ... Q9AE70 17958702
    101872 2q2y:A (2.5) BS01 ADP ? GO:0003777 ... P52732 17766111
    101873 2q2y:A (2.5) BS02 MKR ? GO:0003777 ... P52732 17766111 MOAD: ic50=1.6nM
    BindingDB: IC50=1.6nM
    101874 2q2y:B (2.5) BS01 ADP ? GO:0003777 ... P52732 17766111
    101875 2q2y:B (2.5) BS02 MKR ? GO:0003777 ... P52732 17766111 MOAD: ic50=1.6nM
    BindingDB: IC50=1.6nM
    101876 2q2z:A (3.0) BS01 ADP ? GO:0003777 ... P52732 17766111
    101877 2q2z:A (3.0) BS02 MKK ? GO:0003777 ... P52732 17766111
    101878 2q2z:B (3.0) BS01 ADP ? GO:0003777 ... P52732 17766111
    101879 2q2z:B (3.0) BS02 MKK ? GO:0003777 ... P52732 17766111
    101880 2q31:A (2.7) BS01 ATP 3.6.4.- GO:0000287 ... P68135 18391412
    101881 2q31:A (2.7) BS02 LAR 3.6.4.- GO:0000287 ... P68135 18391412
    101882 2q31:B (2.7) BS01 ATP 3.6.4.- GO:0000287 ... P68135 18391412
    101883 2q31:B (2.7) BS02 LAR 3.6.4.- GO:0000287 ... P68135 18391412
    101884 2q32:A (2.4) BS01 OXN 1.14.14.18 GO:0004392 ... P30519 17965015
    101885 2q32:B (2.4) BS01 OXN 1.14.14.18 GO:0004392 ... P30519 17965015
    101886 2q36:A (2.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 18391412
    101887 2q36:A (2.5) BS02 KAB 3.6.4.- GO:0000287 ... P68135 18391412
    101888 2q37:A (2.5) BS01 3AL 3.5.2.17
    4.1.1.97
    N/A Q9LVM5 17567580
    101889 2q38:A (1.95) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 17705204
    101890 2q38:A (1.95) BS02 LSA 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 17705204 MOAD: Ki=5950nM
    BindingDB: Ki=5950nM
    101891 2q38:A (1.95) BS03 LSA 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 17705204 MOAD: Ki=5950nM
    BindingDB: Ki=5950nM
    101892 2q3c:A (2.1) BS01 peptide 2.5.1.47 GO:0004124 ... P9WP55 17567578
    101893 2q3d:A (2.2) BS01 PDA 2.5.1.47 GO:0004124 ... P9WP55 17567578
    101894 2q3e:A (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101895 2q3e:A (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101896 2q3e:B (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101897 2q3e:B (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101898 2q3e:C (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101899 2q3e:C (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101900 2q3e:D (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101901 2q3e:D (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101902 2q3e:E (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101903 2q3e:E (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101904 2q3e:F (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101905 2q3e:F (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101906 2q3e:G (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101907 2q3e:G (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101908 2q3e:H (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101909 2q3e:H (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101910 2q3e:I (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101911 2q3e:I (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101912 2q3e:J (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101913 2q3e:J (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101914 2q3e:K (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101915 2q3e:K (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101916 2q3e:L (2.0) BS01 NAI 1.1.1.22 GO:0001702 ... O60701 21502315
    101917 2q3e:L (2.0) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21502315
    101918 2q3f:A (2.1) BS01 MG 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    101919 2q3f:A (2.1) BS02 GNP 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    101920 2q3f:B (2.1) BS01 MG 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    101921 2q3f:B (2.1) BS02 GNP 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    101922 2q3h:A (1.73) BS01 GDP ? GO:0003924 ... Q7L0Q8 N/A
    101923 2q3i:A (1.5) BS01 peptide ? N/A A3F986 10520998
    101924 2q3j:A (2.39) BS01 H02 4.99.1.9 GO:0004325 ... P32396 18423489
    101925 2q3k:A (2.0) BS01 MUW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 17596316
    101926 2q3k:B (2.0) BS01 MUW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 17596316
    101927 2q3o:A (2.0) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FUP0 17850744
    101928 2q3o:B (2.0) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FUP0 17850744
    101929 2q3p:A (1.9) BS01 MG ? GO:0003674 ... Q9LUV2 17850744
    101930 2q3r:A (2.0) BS01 FMN 1.3.1.42 GO:0005515 ... Q8LAH7 17850744
    101931 2q3u:A (1.53) BS01 MG 3.5.3.12 GO:0004668 ... Q8GWW7 17850744
    101932 2q3u:B (1.53) BS01 MG 3.5.3.12 GO:0004668 ... Q8GWW7 17850744
    101933 2q3w:A (1.48) BS01 MG ? GO:0042203 ... Q00458 17850744
    101934 2q3w:A (1.48) BS02 FES ? GO:0042203 ... Q00458 17850744
    101935 2q3y:A (2.4) BS01 peptide N/A N/A N/A 17702911
    101936 2q3y:A (2.4) BS02 1CA N/A N/A N/A 17702911
    101937 2q3z:A (2.0) BS01 peptide 2.3.1.-
    2.3.2.13
    3.4.-.-
    3.5.1.44
    GO:0000785 ... P21980 18092889
    101938 2q40:A (1.7) BS01 MG 3.1.3.- GO:0004594 ... Q949P3 17850744
    101939 2q42:A (1.742) BS01 ZN 3.1.2.6 GO:0004416 ... Q9SID3 17850744
    101940 2q42:A (1.742) BS02 FE 3.1.2.6 GO:0004416 ... Q9SID3 17850744
    101941 2q42:B (1.742) BS01 ZN 3.1.2.6 GO:0004416 ... Q9SID3 17850744
    101942 2q42:B (1.742) BS02 FE 3.1.2.6 GO:0004416 ... Q9SID3 17850744
    101943 2q46:A (1.8) BS01 NAP ? GO:0000325 ... Q94EG6 17850744
    101944 2q46:B (1.8) BS01 NAP ? GO:0000325 ... Q94EG6 17850744
    101945 2q4a:A (2.39) BS01 FE 1.-.-.- GO:0003674 ... Q9LIG0 17850744
    101946 2q4a:B (2.39) BS01 FE 1.-.-.- GO:0003674 ... Q9LIG0 17850744
    101947 2q4b:A (2.096) BS01 NAP ? GO:0000325 ... Q94EG6 17850744
    101948 2q4b:B (2.096) BS01 NAP ? GO:0000325 ... Q94EG6 17850744
    101949 2q4h:A (1.834) BS01 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101950 2q4h:A (1.834) BS02 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101951 2q4h:A (1.834) BS03 AMP 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101952 2q4h:B (1.834) BS01 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101953 2q4h:B (1.834) BS02 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101954 2q4h:B (1.834) BS03 AMP 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101955 2q4l:A (2.3) BS01 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101956 2q4l:A (2.3) BS02 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101957 2q4l:B (2.3) BS01 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101958 2q4l:B (2.3) BS02 ZN 2.7.7.- GO:0005634 ... Q9FK51 17850744
    101959 2q4r:A (2.09) BS01 GLY 5.4.2.8 GO:0004615 ... O15305 17850744
    101960 2q4r:A (2.09) BS02 GLY 5.4.2.8 GO:0004615 ... O15305 17850744
    101961 2q4r:A (2.09) BS03 GLY 5.4.2.8 GO:0004615 ... O15305 17850744
    101962 2q4v:A (1.842) BS01 ACO 2.3.1.-
    2.3.1.57
    GO:0004145 ... Q96F10 17850744
    101963 2q4w:A (1.7) BS01 FAD 1.5.99.12 GO:0003824 ... Q9FUJ1 17886275
    101964 2q4x:A (2.1) BS01 HMH 3.5.1.-
    3.5.99.2
    GO:0005829 ... Q9ASY9 17850744
    101965 2q4x:B (2.1) BS01 HMH 3.5.1.-
    3.5.99.2
    GO:0005829 ... Q9ASY9 17850744
    101966 2q4y:A (2.06) BS01 COA 2.3.1.- GO:0004402 ... Q9CAQ2 17850744
    101967 2q4z:B (1.8) BS01 ZN 3.5.1.15 GO:0005634 ... Q9R1T5 17850744
    101968 2q51:A (2.8) BS01 ZN 3.5.1.15 GO:0005515 ... P45381 17850744
    101969 2q51:B (2.8) BS01 ZN 3.5.1.15 GO:0005515 ... P45381 17850744
    101970 2q54:A (1.85) BS01 MU1 ? GO:0004190 ... O38710 17696512
    101971 2q54:B (1.85) BS01 MU1 ? GO:0004190 ... O38710 17696512 MOAD: Ki=0.98nM
    101972 2q55:A (1.9) BS01 MU0 ? GO:0004190 ... O38719 17696512
    101973 2q55:B (1.9) BS01 MU0 ? GO:0004190 ... O38719 17696512 MOAD: Ki=2.04nM
    101974 2q58:A (2.37) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    101975 2q58:A (2.37) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    101976 2q58:A (2.37) BS03 ZOL ? GO:0004161 ... Q5CR09 19101474 BindingDB: IC50=30.1nM, Ki=0.050nM
    101977 2q58:B (2.37) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    101978 2q58:B (2.37) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    101979 2q58:B (2.37) BS03 ZOL ? GO:0004161 ... Q5CR09 19101474 BindingDB: IC50=30.1nM, Ki=0.050nM
    101980 2q59:A (2.2) BS01 240 ? GO:0003677 ... P37231 17937915 BindingDB: IC50=1nM, EC50=2.0nM
    101981 2q59:B (2.2) BS01 240 ? GO:0003677 ... P37231 17937915 BindingDB: IC50=1nM, EC50=2.0nM
    101982 2q5a:A (1.5) BS01 peptide 5.2.1.8 GO:0000413 ... Q13526 17518432
    101983 2q5b:A (1.45) BS01 CU ? GO:0005507 ... Q51883 N/A
    101984 2q5b:A (1.45) BS02 ZN ? GO:0005507 ... Q51883 N/A
    101985 2q5b:B (1.45) BS01 CU ? GO:0005507 ... Q51883 N/A
    101986 2q5b:C (1.45) BS01 CU ? GO:0005507 ... Q51883 N/A
    101987 2q5b:C (1.45) BS02 ZN ? GO:0005507 ... Q51883 N/A
    101988 2q5b:C (1.45) BS03 ZN ? GO:0005507 ... Q51883 N/A
    101989 2q5d:B (3.2) BS01 peptide ? GO:0003723 ... Q14974 18187419
    101990 2q5e:A (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101991 2q5e:B (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101992 2q5e:C (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101993 2q5e:D (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101994 2q5e:E (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101995 2q5e:F (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101996 2q5e:G (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101997 2q5e:H (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    101998 2q5f:A (1.9) BS01 DTA 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780 MOAD: Ki=0.02mM
    101999 2q5g:A (2.7) BS01 1FA ? GO:0003677 ... Q03181 17560785 BindingDB: EC50=130nM
    102000 2q5g:B (2.7) BS01 1FA ? GO:0003677 ... Q03181 17560785 BindingDB: EC50=130nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).