SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1021001 9m2w:C (3.31) BS01 ATP N/A GO:0000502 ... P62195 N/A
    1021002 9m2w:C (3.31) BS02 ATP N/A GO:0000502 ... P62195 N/A
    1021003 9m2w:D (3.31) BS01 ADP N/A GO:0000502 ... P43686 N/A
    1021004 9m2w:F (3.31) BS01 ATP N/A GO:0000502 ... P17980 N/A
    1021005 9m2x:A (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021006 9m2x:A (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021007 9m2x:A (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021008 9m2x:B (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021009 9m2x:B (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021010 9m2x:B (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021011 9m2x:C (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021012 9m2x:C (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021013 9m2x:C (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021014 9m2x:D (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021015 9m2x:D (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021016 9m2x:D (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021017 9m2x:E (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021018 9m2x:E (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021019 9m2x:E (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021020 9m2x:F (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021021 9m2x:F (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021022 9m2x:F (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021023 9m2x:F (3.27) BS04 MG N/A GO:0004176 ... P28737 N/A
    1021024 9m2x:G (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021025 9m2x:G (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021026 9m2x:G (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021027 9m2x:H (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021028 9m2x:H (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021029 9m2x:H (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021030 9m2x:H (3.27) BS04 MG N/A GO:0004176 ... P28737 N/A
    1021031 9m2x:I (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021032 9m2x:I (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021033 9m2x:I (3.27) BS03 ATP N/A GO:0004176 ... P28737 N/A
    1021034 9m2x:I (3.27) BS04 MG N/A GO:0004176 ... P28737 N/A
    1021035 9m2x:J (3.27) BS01 peptide N/A GO:0004176 ... P28737 N/A
    1021036 9m2x:J (3.27) BS02 ATP N/A GO:0004176 ... P28737 N/A
    1021037 9m2x:J (3.27) BS03 MG N/A GO:0004176 ... P28737 N/A
    1021038 9m2y:A (1.56) BS01 A1EMO N/A N/A A0A1L9TCT0 N/A
    1021039 9m30:A (3.05) BS01 rna N/A N/A N/A 41036620
    1021040 9m31:A (2.86) BS01 rna N/A N/A N/A 41036620
    1021041 9m33:A (3.27) BS01 rna N/A N/A N/A 41036620
    1021042 9m33:A (3.27) BS02 rna N/A N/A N/A 41036620
    1021043 9m34:A (3.46) BS01 rna N/A N/A N/A 41036620
    1021044 9m35:A (2.39) BS01 NAP N/A N/A P76558 41197718
    1021045 9m35:A (2.39) BS02 MG N/A N/A P76558 41197718
    1021046 9m35:B (2.39) BS01 NAP N/A N/A P76558 41197718
    1021047 9m35:B (2.39) BS02 MG N/A N/A P76558 41197718
    1021048 9m36:A (2.48) BS01 ZN N/A GO:0005216 ... Q9UL62 40671342
    1021049 9m36:A (2.48) BS02 Y01 N/A GO:0005216 ... Q9UL62 40671342
    1021050 9m36:A (2.48) BS03 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021051 9m36:A (2.48) BS04 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021052 9m36:B (2.48) BS01 ZN N/A GO:0005216 ... Q9UL62 40671342
    1021053 9m36:B (2.48) BS02 Y01 N/A GO:0005216 ... Q9UL62 40671342
    1021054 9m36:B (2.48) BS03 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021055 9m36:B (2.48) BS04 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021056 9m36:C (2.48) BS01 ZN N/A GO:0005216 ... Q9UL62 40671342
    1021057 9m36:C (2.48) BS02 Y01 N/A GO:0005216 ... Q9UL62 40671342
    1021058 9m36:C (2.48) BS03 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021059 9m36:C (2.48) BS04 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021060 9m36:D (2.48) BS01 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021061 9m36:D (2.48) BS02 ZN N/A GO:0005216 ... Q9UL62 40671342
    1021062 9m36:D (2.48) BS03 Y01 N/A GO:0005216 ... Q9UL62 40671342
    1021063 9m36:D (2.48) BS04 A1L5I N/A GO:0005216 ... Q9UL62 40671342
    1021064 9m37:A (1.9) BS01 H9R N/A N/A N/A N/A
    1021065 9m37:A (1.9) BS02 NAD N/A N/A N/A N/A
    1021066 9m37:B (1.9) BS01 H9R N/A N/A N/A N/A
    1021067 9m37:B (1.9) BS02 NAD N/A N/A N/A N/A
    1021068 9m39:A (1.92) BS01 A1EMQ N/A N/A N/A N/A
    1021069 9m39:A (1.92) BS02 NAD N/A N/A N/A N/A
    1021070 9m39:B (1.92) BS01 A1EMQ N/A N/A N/A N/A
    1021071 9m39:B (1.92) BS02 NAD N/A N/A N/A N/A
    1021072 9m3a:A (2.23) BS01 MN N/A N/A N/A N/A
    1021073 9m3a:F (2.23) BS01 MN N/A N/A N/A N/A
    1021074 9m3a:H (2.23) BS01 MN N/A N/A N/A N/A
    1021075 9m3b:A (2.036) BS01 MN N/A N/A N/A N/A
    1021076 9m3d:A (2.0) BS01 NAD N/A N/A N/A N/A
    1021077 9m3d:B (2.0) BS01 NAD N/A N/A N/A N/A
    1021078 9m3d:C (2.0) BS01 NAD N/A N/A N/A N/A
    1021079 9m3d:D (2.0) BS01 NAD N/A N/A N/A N/A
    1021080 9m3d:E (2.0) BS01 NAD N/A N/A N/A N/A
    1021081 9m3d:F (2.0) BS01 NAD N/A N/A N/A N/A
    1021082 9m3e:A (2.5) BS01 OXN N/A GO:0009570 ... D4QE74 N/A
    1021083 9m3e:A (2.5) BS02 OXN N/A GO:0009570 ... D4QE74 N/A
    1021084 9m3m:C (2.01) BS01 NAP N/A GO:0003677 ... Q9BRQ8 40440064
    1021085 9m3m:C (2.01) BS02 6FA N/A GO:0003677 ... Q9BRQ8 40440064
    1021086 9m3m:C (2.01) BS03 A1EMU N/A GO:0003677 ... Q9BRQ8 40440064
    1021087 9m3n:A (2.08) BS01 A1EMT N/A N/A P19474 40623734
    1021088 9m3o:A (1.762) BS01 A1EMR N/A GO:0004672 ... Q15118 40107630
    1021089 9m3p:A (2.01) BS01 SZ6 N/A GO:0004672 ... Q15118 40107630
    1021090 9m3p:A (2.01) BS02 SZ6 N/A GO:0004672 ... Q15118 40107630
    1021091 9m3r:A (2.14) BS01 TF3 N/A GO:0004672 ... Q15119 40107630
    1021092 9m3r:A (2.14) BS02 A1EQH N/A GO:0004672 ... Q15119 40107630
    1021093 9m3s:R (2.83) BS01 HSM N/A N/A N/A N/A
    1021094 9m3t:A (2.08) BS01 TF3 N/A GO:0004672 ... Q15119 40107630
    1021095 9m3t:A (2.08) BS02 A1EQI N/A GO:0004672 ... Q15119 40107630
    1021096 9m3u:A (1.92) BS01 TF3 N/A GO:0004672 ... Q15119 40107630
    1021097 9m3u:A (1.92) BS02 A1EQJ N/A GO:0004672 ... Q15119 40107630
    1021098 9m3w:A (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021099 9m3w:A (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021100 9m3w:A (3.2) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021101 9m3w:A (3.2) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021102 9m3w:B (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021103 9m3w:B (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021104 9m3w:B (3.2) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021105 9m3w:B (3.2) BS04 MG N/A GO:0005515 ... P54609 41137397
    1021106 9m3w:C (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021107 9m3w:C (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021108 9m3w:C (3.2) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021109 9m3w:C (3.2) BS04 MG N/A GO:0005515 ... P54609 41137397
    1021110 9m3w:D (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021111 9m3w:D (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021112 9m3w:D (3.2) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021113 9m3w:D (3.2) BS04 MG N/A GO:0005515 ... P54609 41137397
    1021114 9m3w:E (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021115 9m3w:E (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021116 9m3w:E (3.2) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021117 9m3w:E (3.2) BS04 MG N/A GO:0005515 ... P54609 41137397
    1021118 9m3w:F (3.2) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021119 9m3w:F (3.2) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021120 9m3w:F (3.2) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021121 9m3w:F (3.2) BS04 MG N/A GO:0005515 ... P54609 41137397
    1021122 9m3x:A (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021123 9m3x:A (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021124 9m3x:A (3.3) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021125 9m3x:A (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021126 9m3x:A (3.3) BS05 ANP N/A GO:0005515 ... P54609 41137397
    1021127 9m3x:B (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021128 9m3x:B (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021129 9m3x:B (3.3) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021130 9m3x:B (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021131 9m3x:B (3.3) BS05 ANP N/A GO:0005515 ... P54609 41137397
    1021132 9m3x:C (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021133 9m3x:C (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021134 9m3x:C (3.3) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021135 9m3x:C (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021136 9m3x:C (3.3) BS05 ANP N/A GO:0005515 ... P54609 41137397
    1021137 9m3x:D (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021138 9m3x:D (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021139 9m3x:D (3.3) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021140 9m3x:D (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021141 9m3x:D (3.3) BS05 ANP N/A GO:0005515 ... P54609 41137397
    1021142 9m3x:E (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021143 9m3x:E (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021144 9m3x:E (3.3) BS03 MG N/A GO:0005515 ... P54609 41137397
    1021145 9m3x:E (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021146 9m3x:E (3.3) BS05 ANP N/A GO:0005515 ... P54609 41137397
    1021147 9m3x:F (3.3) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021148 9m3x:F (3.3) BS02 ANP N/A GO:0005515 ... P54609 41137397
    1021149 9m3x:F (3.3) BS03 ANP N/A GO:0005515 ... P54609 41137397
    1021150 9m3x:F (3.3) BS04 ANP N/A GO:0005515 ... P54609 41137397
    1021151 9m3x:F (3.3) BS05 MG N/A GO:0005515 ... P54609 41137397
    1021152 9m3y:A (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021153 9m3y:A (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021154 9m3y:B (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021155 9m3y:B (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021156 9m3y:C (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021157 9m3y:C (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021158 9m3y:D (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021159 9m3y:D (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021160 9m3y:E (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021161 9m3y:E (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021162 9m3y:F (3.0) BS01 ADP N/A GO:0005515 ... P54609 41137397
    1021163 9m3y:F (3.0) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021164 9m3z:A (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021165 9m3z:A (3.9) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021166 9m3z:B (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021167 9m3z:B (3.9) BS02 MG N/A GO:0005515 ... P54609 41137397
    1021168 9m3z:B (3.9) BS03 ADP N/A GO:0005515 ... P54609 41137397
    1021169 9m3z:C (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021170 9m3z:C (3.9) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021171 9m3z:D (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021172 9m3z:D (3.9) BS02 ADP N/A GO:0005515 ... P54609 41137397
    1021173 9m3z:E (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021174 9m3z:E (3.9) BS02 MG N/A GO:0005515 ... P54609 41137397
    1021175 9m3z:E (3.9) BS03 ADP N/A GO:0005515 ... P54609 41137397
    1021176 9m3z:F (3.9) BS01 ANP N/A GO:0005515 ... P54609 41137397
    1021177 9m3z:F (3.9) BS02 MG N/A GO:0005515 ... P54609 41137397
    1021178 9m3z:F (3.9) BS03 ADP N/A GO:0005515 ... P54609 41137397
    1021179 9m40:R (2.72) BS01 AG2 N/A N/A N/A N/A
    1021180 9m42:R (3.2) BS01 A1L8O N/A GO:0004930 ... P09850
    Q6DWJ6
    41365886
    1021181 9m47:A (2.7) BS01 HEM N/A N/A A0A224AU14 41167129
    1021182 9m48:A (2.6) BS01 rna N/A N/A P0DTD1 N/A
    1021183 9m48:A (2.6) BS02 rna N/A N/A P0DTD1 N/A
    1021184 9m48:A (2.6) BS03 CO N/A N/A P0DTD1 N/A
    1021185 9m48:E (2.6) BS01 rna N/A N/A P0DTD1 N/A
    1021186 9m49:A (2.78) BS01 rna N/A N/A P0DTD1 N/A
    1021187 9m49:A (2.78) BS02 rna N/A N/A P0DTD1 N/A
    1021188 9m49:C (2.78) BS01 rna N/A N/A P0DTD1 N/A
    1021189 9m49:C (2.78) BS02 rna N/A N/A P0DTD1 N/A
    1021190 9m49:C (2.78) BS03 rna N/A N/A P0DTD1 N/A
    1021191 9m49:C (2.78) BS04 CO N/A N/A P0DTD1 N/A
    1021192 9m49:E (2.78) BS01 rna N/A N/A P0DTD1 N/A
    1021193 9m49:E (2.78) BS02 rna N/A N/A P0DTD1 N/A
    1021194 9m49:F (2.78) BS01 rna N/A N/A P0DTD1 N/A
    1021195 9m4f:1 (2.82) BS01 CLA N/A N/A A0A835Z6M5 40778523
    1021196 9m4f:1 (2.82) BS02 CLA N/A N/A A0A835Z6M5 40778523
    1021197 9m4f:1 (2.82) BS03 CLA N/A N/A A0A835Z6M5 40778523
    1021198 9m4f:1 (2.82) BS04 CLA N/A N/A A0A835Z6M5 40778523
    1021199 9m4f:1 (2.82) BS05 CLA N/A N/A A0A835Z6M5 40778523
    1021200 9m4f:1 (2.82) BS06 CLA N/A N/A A0A835Z6M5 40778523

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).