SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5100 5101 5102 5103 5104 5105 5106 5107 5108 5109 5110 5111 5112 5113 5114 5115 5116 5117 5118 5119 5120 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1021801 9m76:D (4.1) BS02 dna N/A N/A P02281 N/A
    1021802 9m76:E (4.1) BS01 dna N/A N/A A0A310TTQ1 N/A
    1021803 9m76:E (4.1) BS02 dna N/A N/A A0A310TTQ1 N/A
    1021804 9m76:F (4.1) BS01 dna N/A N/A P62799 N/A
    1021805 9m76:F (4.1) BS02 dna N/A N/A P62799 N/A
    1021806 9m76:G (4.1) BS01 dna N/A N/A Q6AZJ8 N/A
    1021807 9m76:G (4.1) BS02 dna N/A N/A Q6AZJ8 N/A
    1021808 9m76:H (4.1) BS01 dna N/A N/A P02281 N/A
    1021809 9m76:H (4.1) BS02 dna N/A N/A P02281 N/A
    1021810 9m76:K (4.1) BS01 dna N/A N/A Q96T88 N/A
    1021811 9m76:K (4.1) BS02 dna N/A N/A Q96T88 N/A
    1021812 9m76:K (4.1) BS03 ZN N/A N/A Q96T88 N/A
    1021813 9m76:K (4.1) BS04 ZN N/A N/A Q96T88 N/A
    1021814 9m76:K (4.1) BS05 ZN N/A N/A Q96T88 N/A
    1021815 9m76:K (4.1) BS06 ZN N/A N/A Q96T88 N/A
    1021816 9m77:A (3.7) BS01 dna N/A N/A A0A310TTQ1 N/A
    1021817 9m77:A (3.7) BS02 dna N/A N/A A0A310TTQ1 N/A
    1021818 9m77:B (3.7) BS01 dna N/A N/A P62799 N/A
    1021819 9m77:B (3.7) BS02 dna N/A N/A P62799 N/A
    1021820 9m77:C (3.7) BS01 dna N/A N/A Q6AZJ8 N/A
    1021821 9m77:C (3.7) BS02 dna N/A N/A Q6AZJ8 N/A
    1021822 9m77:D (3.7) BS01 dna N/A N/A P02281 N/A
    1021823 9m77:D (3.7) BS02 dna N/A N/A P02281 N/A
    1021824 9m77:E (3.7) BS01 dna N/A N/A A0A310TTQ1 N/A
    1021825 9m77:E (3.7) BS02 dna N/A N/A A0A310TTQ1 N/A
    1021826 9m77:F (3.7) BS01 dna N/A N/A P62799 N/A
    1021827 9m77:F (3.7) BS02 dna N/A N/A P62799 N/A
    1021828 9m77:G (3.7) BS01 dna N/A N/A Q6AZJ8 N/A
    1021829 9m77:G (3.7) BS02 dna N/A N/A Q6AZJ8 N/A
    1021830 9m77:H (3.7) BS01 dna N/A N/A P02281 N/A
    1021831 9m77:H (3.7) BS02 dna N/A N/A P02281 N/A
    1021832 9m77:K (3.7) BS01 dna N/A N/A Q96T88 N/A
    1021833 9m77:K (3.7) BS02 dna N/A N/A Q96T88 N/A
    1021834 9m77:K (3.7) BS03 ZN N/A N/A Q96T88 N/A
    1021835 9m77:K (3.7) BS04 ZN N/A N/A Q96T88 N/A
    1021836 9m77:K (3.7) BS05 ZN N/A N/A Q96T88 N/A
    1021837 9m7a:A (2.45) BS01 CYS N/A N/A D5SUT9 N/A
    1021838 9m7a:A (2.45) BS02 CYS N/A N/A D5SUT9 N/A
    1021839 9m7a:B (2.45) BS01 CYS N/A N/A D5SUT9 N/A
    1021840 9m7a:B (2.45) BS02 CYS N/A N/A D5SUT9 N/A
    1021841 9m7a:C (2.45) BS01 CYS N/A N/A D5SUT9 N/A
    1021842 9m7a:C (2.45) BS02 CYS N/A N/A D5SUT9 N/A
    1021843 9m7e:A (2.90004) BS01 FPP N/A N/A A0A1M6CXF0 40852458
    1021844 9m7e:A (2.90004) BS02 CA N/A N/A A0A1M6CXF0 40852458
    1021845 9m7e:A (2.90004) BS03 A1MAK N/A N/A A0A1M6CXF0 40852458
    1021846 9m7e:B (2.90004) BS01 FPP N/A N/A A0A1M6CXF0 40852458
    1021847 9m7e:B (2.90004) BS02 CA N/A N/A A0A1M6CXF0 40852458
    1021848 9m7e:B (2.90004) BS03 A1MAK N/A N/A A0A1M6CXF0 40852458
    1021849 9m7f:A (2.60003) BS01 FPP N/A N/A A0A1M6CXF0 40852458
    1021850 9m7f:A (2.60003) BS02 FPP N/A N/A A0A1M6CXF0 40852458
    1021851 9m7f:B (2.60003) BS01 FPP N/A N/A A0A1M6CXF0 40852458
    1021852 9m7f:B (2.60003) BS02 FPP N/A N/A A0A1M6CXF0 40852458
    1021853 9m7i:A (1.75) BS01 AKG N/A N/A B9WZX5 N/A
    1021854 9m7i:A (1.75) BS02 CO N/A N/A B9WZX5 N/A
    1021855 9m7i:A (1.75) BS03 A1EM0 N/A N/A B9WZX5 N/A
    1021856 9m7i:B (1.75) BS01 A1EM0 N/A N/A B9WZX5 N/A
    1021857 9m7i:B (1.75) BS02 CO N/A N/A B9WZX5 N/A
    1021858 9m7k:A (3.44) BS01 peptide N/A N/A P28737 N/A
    1021859 9m7k:A (3.44) BS02 ATP N/A N/A P28737 N/A
    1021860 9m7k:A (3.44) BS03 ATP N/A N/A P28737 N/A
    1021861 9m7k:B (3.44) BS01 peptide N/A N/A P28737 N/A
    1021862 9m7k:B (3.44) BS02 ATP N/A N/A P28737 N/A
    1021863 9m7k:B (3.44) BS03 ATP N/A N/A P28737 N/A
    1021864 9m7k:C (3.44) BS01 peptide N/A N/A P28737 N/A
    1021865 9m7k:C (3.44) BS02 ATP N/A N/A P28737 N/A
    1021866 9m7k:C (3.44) BS03 MG N/A N/A P28737 N/A
    1021867 9m7k:C (3.44) BS04 ATP N/A N/A P28737 N/A
    1021868 9m7k:D (3.44) BS01 peptide N/A N/A P28737 N/A
    1021869 9m7k:D (3.44) BS02 ATP N/A N/A P28737 N/A
    1021870 9m7k:D (3.44) BS03 MG N/A N/A P28737 N/A
    1021871 9m7k:D (3.44) BS04 ATP N/A N/A P28737 N/A
    1021872 9m7k:E (3.44) BS01 peptide N/A N/A P28737 N/A
    1021873 9m7k:E (3.44) BS02 ATP N/A N/A P28737 N/A
    1021874 9m7k:E (3.44) BS03 MG N/A N/A P28737 N/A
    1021875 9m7k:E (3.44) BS04 ATP N/A N/A P28737 N/A
    1021876 9m7k:F (3.44) BS01 peptide N/A N/A P28737 N/A
    1021877 9m7k:F (3.44) BS02 ATP N/A N/A P28737 N/A
    1021878 9m7k:F (3.44) BS03 ATP N/A N/A P28737 N/A
    1021879 9m7k:F (3.44) BS04 MG N/A N/A P28737 N/A
    1021880 9m7k:G (3.44) BS01 peptide N/A N/A P28737 N/A
    1021881 9m7k:G (3.44) BS02 ATP N/A N/A P28737 N/A
    1021882 9m7l:A (1.36) BS01 MG N/A GO:0005515 ... Q08623 40409548
    1021883 9m7m:A (1.26) BS01 MG N/A GO:0005515 ... Q08623 40409548
    1021884 9m7m:A (1.26) BS02 FJF N/A GO:0005515 ... Q08623 40409548
    1021885 9m7t:A (3.36) BS01 dna N/A N/A N/A N/A
    1021886 9m7t:A (3.36) BS02 dna N/A N/A N/A N/A
    1021887 9m7t:B (3.36) BS01 dna N/A N/A N/A N/A
    1021888 9m7t:B (3.36) BS02 dna N/A N/A N/A N/A
    1021889 9m7u:B (3.18) BS01 rna N/A N/A N/A 41407702
    1021890 9m7u:C (3.18) BS01 rna N/A N/A N/A 41407702
    1021891 9m7y:A (3.4) BS01 dna N/A GO:0000345 ... P0A8V2 40682819
    1021892 9m7y:B (3.4) BS01 dna N/A GO:0000287 ... P0A8T7 40682819
    1021893 9m7y:B (3.4) BS02 dna N/A GO:0000287 ... P0A8T7 40682819
    1021894 9m7y:F (3.4) BS01 dna N/A GO:0003700 ... B0FIJ8 40682819
    1021895 9m7y:F (3.4) BS02 dna N/A GO:0003700 ... B0FIJ8 40682819
    1021896 9m82:A (3.08) BS01 A1EOQ N/A N/A O75874 N/A
    1021897 9m82:B (3.08) BS01 A1EOQ N/A N/A O75874 N/A
    1021898 9m84:C (3.61) BS01 dna N/A GO:0000345 ... Q9L0L0 40272361
    1021899 9m84:C (3.61) BS02 dna N/A GO:0000345 ... Q9L0L0 40272361
    1021900 9m84:D (3.61) BS01 dna N/A GO:0000287 ... Q8CJT1 40272361
    1021901 9m84:D (3.61) BS02 dna N/A GO:0000287 ... Q8CJT1 40272361
    1021902 9m84:D (3.61) BS03 MG N/A GO:0000287 ... Q8CJT1 40272361
    1021903 9m84:D (3.61) BS04 ZN N/A GO:0000287 ... Q8CJT1 40272361
    1021904 9m84:D (3.61) BS05 ZN N/A GO:0000287 ... Q8CJT1 40272361
    1021905 9m84:F (3.61) BS01 dna N/A GO:0003700 ... Q9L0I8 40272361
    1021906 9m84:F (3.61) BS02 dna N/A GO:0003700 ... Q9L0I8 40272361
    1021907 9m85:A (1.83) BS01 MN N/A N/A N/A N/A
    1021908 9m85:A (1.83) BS02 MN N/A N/A N/A N/A
    1021909 9m86:A (2.795) BS01 rna N/A N/A O42662 40841561
    1021910 9m86:C (2.795) BS01 rna N/A N/A O42662 40841561
    1021911 9m88:A (3.1) BS01 5YM N/A GO:0004930 ... N/A 40866348
    1021912 9m88:A (3.1) BS02 A1EM3 N/A GO:0004930 ... N/A 40866348
    1021913 9m88:A (3.1) BS03 A1EM2 N/A GO:0004930 ... N/A 40866348
    1021914 9m88:B (3.1) BS01 5YM N/A GO:0004930 ... N/A 40866348
    1021915 9m88:B (3.1) BS02 A1EM1 N/A GO:0004930 ... N/A 40866348
    1021916 9m88:B (3.1) BS03 1DO N/A GO:0004930 ... N/A 40866348
    1021917 9m88:B (3.1) BS04 A1EM3 N/A GO:0004930 ... N/A 40866348
    1021918 9m88:B (3.1) BS05 A1EQ8 N/A GO:0004930 ... N/A 40866348
    1021919 9m8i:A (2.49) BS01 A1L8P N/A GO:0005576 ... A0A0K8P6T7 41418965
    1021920 9m8i:B (2.49) BS01 A1L8P N/A GO:0005576 ... A0A0K8P6T7 41418965
    1021921 9m8k:R (3.0) BS01 peptide N/A N/A N/A N/A
    1021922 9m8m:0 (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021923 9m8m:0 (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021924 9m8m:0 (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021925 9m8m:1 (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021926 9m8m:1 (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021927 9m8m:1 (2.3) BS03 U10 N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021928 9m8m:1 (2.3) BS04 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021929 9m8m:1 (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021930 9m8m:1 (2.3) BS06 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021931 9m8m:1 (2.3) BS07 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021932 9m8m:2 (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021933 9m8m:2 (2.3) BS02 U10 N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021934 9m8m:2 (2.3) BS03 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021935 9m8m:2 (2.3) BS04 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021936 9m8m:3 (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021937 9m8m:3 (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021938 9m8m:3 (2.3) BS03 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021939 9m8m:3 (2.3) BS04 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021940 9m8m:3 (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021941 9m8m:3 (2.3) BS06 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021942 9m8m:4 (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021943 9m8m:4 (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021944 9m8m:4 (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021945 9m8m:5 (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021946 9m8m:5 (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021947 9m8m:5 (2.3) BS03 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021948 9m8m:5 (2.3) BS04 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021949 9m8m:5 (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021950 9m8m:6 (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021951 9m8m:6 (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021952 9m8m:6 (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021953 9m8m:7 (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021954 9m8m:7 (2.3) BS02 U10 N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021955 9m8m:7 (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021956 9m8m:7 (2.3) BS04 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021957 9m8m:7 (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021958 9m8m:7 (2.3) BS06 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021959 9m8m:7 (2.3) BS07 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021960 9m8m:8 (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021961 9m8m:8 (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021962 9m8m:8 (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021963 9m8m:9 (2.3) BS01 A1L8Q N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021964 9m8m:9 (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021965 9m8m:9 (2.3) BS03 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021966 9m8m:9 (2.3) BS04 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021967 9m8m:9 (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021968 9m8m:9 (2.3) BS06 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021969 9m8m:9 (2.3) BS07 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021970 9m8m:A (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021971 9m8m:A (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021972 9m8m:A (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021973 9m8m:A (2.3) BS04 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021974 9m8m:A (2.3) BS05 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021975 9m8m:B (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021976 9m8m:B (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021977 9m8m:B (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021978 9m8m:C (2.3) BS01 HEM N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021979 9m8m:C (2.3) BS02 HEC N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021980 9m8m:C (2.3) BS03 HEC N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021981 9m8m:C (2.3) BS04 HEC N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021982 9m8m:C (2.3) BS05 MG N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021983 9m8m:C (2.3) BS06 MG N/A GO:0005506 ... A0A4R2PKR2 40551662
    1021984 9m8m:D (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021985 9m8m:D (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021986 9m8m:D (2.3) BS03 U10 N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021987 9m8m:D (2.3) BS04 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021988 9m8m:D (2.3) BS05 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021989 9m8m:D (2.3) BS06 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021990 9m8m:E (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021991 9m8m:E (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021992 9m8m:E (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021993 9m8m:F (2.3) BS01 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021994 9m8m:F (2.3) BS02 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021995 9m8m:F (2.3) BS03 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021996 9m8m:F (2.3) BS04 BCL N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021997 9m8m:F (2.3) BS05 CRT N/A GO:0005886 ... A0A4R2PMJ4 40551662
    1021998 9m8m:G (2.3) BS01 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662
    1021999 9m8m:G (2.3) BS02 CRT N/A GO:0005886 ... A0A4R2PKF8 40551662
    1022000 9m8m:G (2.3) BS03 BCL N/A GO:0005886 ... A0A4R2PKF8 40551662

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).