SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1022201 9ma9:A (2.2) BS01 ZN N/A N/A P0DTD1 N/A
    1022202 9ma9:A (2.2) BS02 A1ENJ N/A N/A P0DTD1 N/A
    1022203 9maa:A (2.38) BS01 ZN N/A N/A P0DTD1 N/A
    1022204 9maa:A (2.38) BS02 A1ENK N/A N/A P0DTD1 N/A
    1022205 9mab:A (2.18) BS01 ZN N/A N/A P0DTD1 N/A
    1022206 9mab:A (2.18) BS02 A1EHF N/A N/A P0DTD1 N/A
    1022207 9mab:A (2.18) BS03 A1EHF N/A N/A P0DTD1 N/A
    1022208 9mac:A (1.99) BS01 ZN N/A N/A P0DTD1 N/A
    1022209 9mac:A (1.99) BS02 A1AYY N/A N/A P0DTD1 N/A
    1022210 9maf:A (2.04) BS01 ZN N/A N/A P0DTD1 N/A
    1022211 9maf:A (2.04) BS02 DJP N/A N/A P0DTD1 N/A
    1022212 9mag:A (3.37) BS01 A1ENN N/A N/A N/A N/A
    1022213 9mag:B (3.37) BS01 A1ENN N/A N/A N/A N/A
    1022214 9mag:C (3.37) BS01 A1ENN N/A N/A N/A N/A
    1022215 9mag:D (3.37) BS01 A1ENN N/A N/A N/A N/A
    1022216 9mah:A (2.1) BS01 A1ENO N/A N/A P37231 N/A
    1022217 9mah:B (2.1) BS01 A1ENO N/A N/A P37231 N/A
    1022218 9mai:A (3.35) BS01 A1ENN N/A N/A N/A N/A
    1022219 9mai:B (3.35) BS01 A1ENN N/A N/A N/A N/A
    1022220 9mai:C (3.35) BS01 A1ENN N/A N/A N/A N/A
    1022221 9mai:D (3.35) BS01 A1ENN N/A N/A N/A N/A
    1022222 9maj:A (2.65) BS01 ZN N/A N/A P0DTD1 N/A
    1022223 9maj:A (2.65) BS02 E5X N/A N/A P0DTD1 N/A
    1022224 9mal:A (2.15) BS01 ZN N/A N/A P0DTD1 N/A
    1022225 9mal:A (2.15) BS02 8K2 N/A N/A P0DTD1 N/A
    1022226 9mam:A (1.81) BS01 ZN N/A N/A P0DTD1 N/A
    1022227 9mam:A (1.81) BS02 A1ENH N/A N/A P0DTD1 N/A
    1022228 9map:A (3.0) BS01 peptide N/A N/A Q9NZQ7 N/A
    1022229 9mar:A (2.374) BS01 A1ENI N/A N/A Q6XEC0 N/A
    1022230 9mar:B (2.374) BS01 A1ENI N/A N/A Q6XEC0 N/A
    1022231 9mar:C (2.374) BS01 A1ENI N/A N/A Q6XEC0 N/A
    1022232 9mar:D (2.374) BS01 A1ENI N/A N/A Q6XEC0 N/A
    1022233 9mas:A (1.757) BS01 ZN N/A N/A Q5U7L7 41082617
    1022234 9mas:A (1.757) BS02 ZN N/A N/A Q5U7L7 41082617
    1022235 9mas:A (1.757) BS03 A1ENM N/A N/A Q5U7L7 41082617
    1022236 9mas:B (1.757) BS01 ZN N/A N/A Q5U7L7 41082617
    1022237 9mas:B (1.757) BS02 ZN N/A N/A Q5U7L7 41082617
    1022238 9mas:B (1.757) BS03 A1ENM N/A N/A Q5U7L7 41082617
    1022239 9maw:A (2.45) BS01 A1ENP N/A N/A Q92547 N/A
    1022240 9mb3:A (1.6) BS01 ND0 N/A N/A Q96MU7 N/A
    1022241 9mb3:B (1.6) BS01 ND0 N/A N/A Q96MU7 N/A
    1022242 9mb4:A (2.441) BS01 ZN N/A N/A C7C422 41082617
    1022243 9mb4:A (2.441) BS02 ZN N/A N/A C7C422 41082617
    1022244 9mb4:A (2.441) BS03 A1ENL N/A N/A C7C422 41082617
    1022245 9mb4:B (2.441) BS01 ZN N/A N/A C7C422 41082617
    1022246 9mb4:B (2.441) BS02 ZN N/A N/A C7C422 41082617
    1022247 9mb4:B (2.441) BS03 A1ENL N/A N/A C7C422 41082617
    1022248 9mb4:C (2.441) BS01 ZN N/A N/A C7C422 41082617
    1022249 9mb4:C (2.441) BS02 ZN N/A N/A C7C422 41082617
    1022250 9mb4:C (2.441) BS03 A1ENL N/A N/A C7C422 41082617
    1022251 9mb4:D (2.441) BS01 ZN N/A N/A C7C422 41082617
    1022252 9mb4:D (2.441) BS02 ZN N/A N/A C7C422 41082617
    1022253 9mb4:D (2.441) BS03 A1ENL N/A N/A C7C422 41082617
    1022254 9mb6:A (3.01) BS01 dna N/A N/A J7RUA5
    Q12306
    N/A
    1022255 9mb6:A (3.01) BS02 rna N/A N/A J7RUA5
    Q12306
    N/A
    1022256 9mb6:A (3.01) BS03 dna N/A N/A J7RUA5
    Q12306
    N/A
    1022257 9mb7:A (2.88) BS01 dna N/A N/A J7RUA5
    Q12306
    N/A
    1022258 9mb7:A (2.88) BS02 dna N/A N/A J7RUA5
    Q12306
    N/A
    1022259 9mb7:A (2.88) BS03 rna N/A N/A J7RUA5
    Q12306
    N/A
    1022260 9mb9:D (2.97) BS01 HVG N/A GO:0004930 ... O00222 40972528
    1022261 9mb9:R (2.97) BS01 A1ENS N/A GO:0004930 ... O00222 40972528
    1022262 9mb9:R (2.97) BS02 HVG N/A GO:0004930 ... O00222 40972528
    1022263 9mba:D (3.14) BS01 GLU N/A GO:0004930 ... O00222 40972528
    1022264 9mba:R (3.14) BS01 GLU N/A GO:0004930 ... O00222 40972528
    1022265 9mbb:A (3.25) BS01 Z99 N/A GO:0004930 ... O00222 40972528
    1022266 9mbb:B (3.25) BS01 Z99 N/A GO:0004930 ... O00222 40972528
    1022267 9mbc:A (2.97) BS01 A1ENR N/A GO:0004930 ... O00222 40972528
    1022268 9mbc:A (2.97) BS02 HVG N/A GO:0004930 ... O00222 40972528
    1022269 9mbc:A (2.97) BS03 A1ENR N/A GO:0004930 ... O00222 40972528
    1022270 9mbc:B (2.97) BS01 A1ENR N/A GO:0004930 ... O00222 40972528
    1022271 9mbc:B (2.97) BS02 HVG N/A GO:0004930 ... O00222 40972528
    1022272 9mbe:A (1.4) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022273 9mbe:B (1.4) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022274 9mbf:A (1.5) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022275 9mbf:B (1.5) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022276 9mbg:A (1.2) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022277 9mbg:B (1.2) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022278 9mbh:A (1.21) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022279 9mbh:A (1.21) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022280 9mbh:A (1.21) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022281 9mbh:B (1.21) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022282 9mbh:B (1.21) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022283 9mbh:B (1.21) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022284 9mbi:A (1.09) BS01 MN N/A GO:0005515 ... P36639 40674425
    1022285 9mbi:A (1.09) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022286 9mbi:A (1.09) BS03 8DG N/A GO:0005515 ... P36639 40674425
    1022287 9mbi:A (1.09) BS04 8OG N/A GO:0005515 ... P36639 40674425
    1022288 9mbi:B (1.09) BS01 8DG N/A GO:0005515 ... P36639 40674425
    1022289 9mbi:B (1.09) BS02 8OG N/A GO:0005515 ... P36639 40674425
    1022290 9mbi:B (1.09) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022291 9mbi:B (1.09) BS04 MN N/A GO:0005515 ... P36639 40674425
    1022292 9mbj:A (1.57) BS01 8OG N/A GO:0005515 ... P36639 40674425
    1022293 9mbj:A (1.57) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022294 9mbj:A (1.57) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022295 9mbj:B (1.57) BS01 8OG N/A GO:0005515 ... P36639 40674425
    1022296 9mbj:B (1.57) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022297 9mbj:B (1.57) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022298 9mbk:A (1.18) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022299 9mbk:B (1.18) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022300 9mbl:A (1.37) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022301 9mbl:A (1.37) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022302 9mbl:A (1.37) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022303 9mbl:B (1.37) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022304 9mbl:B (1.37) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022305 9mbl:B (1.37) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022306 9mbm:A (1.42) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022307 9mbm:A (1.42) BS02 IGU N/A GO:0005515 ... P36639 40674425
    1022308 9mbm:A (1.42) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022309 9mbm:A (1.42) BS04 MN N/A GO:0005515 ... P36639 40674425
    1022310 9mbm:B (1.42) BS01 6U4 N/A GO:0005515 ... P36639 40674425
    1022311 9mbm:B (1.42) BS02 IGU N/A GO:0005515 ... P36639 40674425
    1022312 9mbm:B (1.42) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022313 9mbm:B (1.42) BS04 MN N/A GO:0005515 ... P36639 40674425
    1022314 9mbn:A (1.55) BS01 IGU N/A GO:0005515 ... P36639 40674425
    1022315 9mbn:A (1.55) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022316 9mbn:A (1.55) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022317 9mbn:B (1.55) BS01 IGU N/A GO:0005515 ... P36639 40674425
    1022318 9mbn:B (1.55) BS02 MN N/A GO:0005515 ... P36639 40674425
    1022319 9mbn:B (1.55) BS03 MN N/A GO:0005515 ... P36639 40674425
    1022320 9mbp:A (2.75) BS01 ATP N/A N/A P35998 N/A
    1022321 9mbp:A (2.75) BS02 ATP N/A N/A P35998 N/A
    1022322 9mbp:B (2.75) BS01 ATP N/A N/A P62191 N/A
    1022323 9mbp:B (2.75) BS02 ATP N/A N/A P62191 N/A
    1022324 9mbp:C (2.75) BS01 ATP N/A N/A P62195 N/A
    1022325 9mbp:D (2.75) BS01 peptide N/A N/A P43686 N/A
    1022326 9mbp:D (2.75) BS02 ATP N/A N/A P43686 N/A
    1022327 9mbp:D (2.75) BS03 ADP N/A N/A P43686 N/A
    1022328 9mbp:E (2.75) BS01 ADP N/A N/A A0A087X2I1 N/A
    1022329 9mbp:F (2.75) BS01 ATP N/A N/A P17980 N/A
    1022330 9mbp:N (2.75) BS01 LDZ N/A N/A P28072 N/A
    1022331 9mbp:O (2.75) BS01 LDZ N/A N/A Q99436 N/A
    1022332 9mbp:R (2.75) BS01 LDZ N/A N/A P28074 N/A
    1022333 9mbp:S (2.75) BS01 LDZ N/A N/A P20618 N/A
    1022334 9mbp:c (2.75) BS01 ZN N/A N/A O00487 N/A
    1022335 9mbp:n (2.75) BS01 LDZ N/A N/A P28072 N/A
    1022336 9mbp:o (2.75) BS01 LDZ N/A N/A Q99436 N/A
    1022337 9mbp:r (2.75) BS01 LDZ N/A N/A P28074 N/A
    1022338 9mbq:A (3.08) BS01 peptide N/A N/A N/A N/A
    1022339 9mbq:A (3.08) BS02 ATP N/A N/A N/A N/A
    1022340 9mbq:A (3.08) BS03 ATP N/A N/A N/A N/A
    1022341 9mbq:B (3.08) BS01 peptide N/A N/A N/A N/A
    1022342 9mbq:B (3.08) BS02 ATP N/A N/A N/A N/A
    1022343 9mbq:B (3.08) BS03 ATP N/A N/A N/A N/A
    1022344 9mbq:C (3.08) BS01 peptide N/A N/A N/A N/A
    1022345 9mbq:C (3.08) BS02 ATP N/A N/A N/A N/A
    1022346 9mbq:C (3.08) BS03 ATP N/A N/A N/A N/A
    1022347 9mbq:D (3.08) BS01 peptide N/A N/A N/A N/A
    1022348 9mbq:D (3.08) BS02 ATP N/A N/A N/A N/A
    1022349 9mbq:D (3.08) BS03 ADP N/A N/A N/A N/A
    1022350 9mbq:E (3.08) BS01 ADP N/A N/A N/A N/A
    1022351 9mbq:F (3.08) BS01 peptide N/A N/A N/A N/A
    1022352 9mbq:F (3.08) BS02 ATP N/A N/A N/A N/A
    1022353 9mbq:N (3.08) BS01 LDZ N/A N/A N/A N/A
    1022354 9mbq:O (3.08) BS01 LDZ N/A N/A N/A N/A
    1022355 9mbq:R (3.08) BS01 LDZ N/A N/A N/A N/A
    1022356 9mbq:c (3.08) BS01 ZN N/A N/A N/A N/A
    1022357 9mbq:n (3.08) BS01 LDZ N/A N/A N/A N/A
    1022358 9mbq:o (3.08) BS01 LDZ N/A N/A N/A N/A
    1022359 9mbq:p (3.08) BS01 LDZ N/A N/A N/A N/A
    1022360 9mbq:r (3.08) BS01 LDZ N/A N/A N/A N/A
    1022361 9mbv:A (1.94) BS01 XIU N/A N/A P0C6X7 41567121
    1022362 9mbv:B (1.94) BS01 XIU N/A N/A P0C6X7 41567121
    1022363 9mc0:A (2.87) BS01 A1ENX N/A N/A Q92630 N/A
    1022364 9mc0:B (2.87) BS01 A1ENX N/A N/A Q92630 N/A
    1022365 9mc4:A (3.32) BS01 AMP N/A N/A P22314 N/A
    1022366 9mc5:A (3.29) BS01 AMP N/A N/A P22314 N/A
    1022367 9mc6:A (3.32) BS01 AMP N/A N/A P22314 N/A
    1022368 9mc7:A (3.34) BS01 AMP N/A N/A P22314 N/A
    1022369 9mc8:A (3.31) BS01 ZWD N/A GO:0005452 ... Q4U2R8 N/A
    1022370 9mc9:A (3.37) BS01 AMP N/A N/A P22314 N/A
    1022371 9mcb:A (3.42) BS01 AMP N/A N/A P22314 N/A
    1022372 9mcc:A (2.42) BS01 CLA N/A N/A N/A N/A
    1022373 9mcc:A (2.42) BS02 CLA N/A N/A N/A N/A
    1022374 9mcc:A (2.42) BS03 CLA N/A N/A N/A N/A
    1022375 9mcc:A (2.42) BS04 CLA N/A N/A N/A N/A
    1022376 9mcc:A (2.42) BS05 CLA N/A N/A N/A N/A
    1022377 9mcc:A (2.42) BS06 CLA N/A N/A N/A N/A
    1022378 9mcc:A (2.42) BS07 CLA N/A N/A N/A N/A
    1022379 9mcc:A (2.42) BS08 CLA N/A N/A N/A N/A
    1022380 9mcc:A (2.42) BS09 CLA N/A N/A N/A N/A
    1022381 9mcc:A (2.42) BS10 CLA N/A N/A N/A N/A
    1022382 9mcc:A (2.42) BS11 CLA N/A N/A N/A N/A
    1022383 9mcc:A (2.42) BS12 CLA N/A N/A N/A N/A
    1022384 9mcc:A (2.42) BS13 A1L1F N/A N/A N/A N/A
    1022385 9mcc:A (2.42) BS14 A1L1F N/A N/A N/A N/A
    1022386 9mcc:B (2.42) BS01 CLA N/A N/A N/A N/A
    1022387 9mcc:B (2.42) BS02 CLA N/A N/A N/A N/A
    1022388 9mcc:B (2.42) BS03 CLA N/A N/A N/A N/A
    1022389 9mcc:B (2.42) BS04 CLA N/A N/A N/A N/A
    1022390 9mcc:B (2.42) BS05 CLA N/A N/A N/A N/A
    1022391 9mcc:B (2.42) BS06 CLA N/A N/A N/A N/A
    1022392 9mcc:B (2.42) BS07 CLA N/A N/A N/A N/A
    1022393 9mcc:B (2.42) BS08 CLA N/A N/A N/A N/A
    1022394 9mcc:B (2.42) BS09 CLA N/A N/A N/A N/A
    1022395 9mcc:B (2.42) BS10 CLA N/A N/A N/A N/A
    1022396 9mcc:B (2.42) BS11 CLA N/A N/A N/A N/A
    1022397 9mcc:B (2.42) BS12 A1L1F N/A N/A N/A N/A
    1022398 9mcc:B (2.42) BS13 CLA N/A N/A N/A N/A
    1022399 9mcc:C (2.42) BS01 CLA N/A N/A N/A N/A
    1022400 9mcc:C (2.42) BS02 CLA N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).