SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1024001 9mhu:A (3.02) BS02 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024002 9mhu:B (3.02) BS01 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024003 9mhu:B (3.02) BS02 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024004 9mhu:C (3.02) BS01 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024005 9mhu:C (3.02) BS02 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024006 9mhu:D (3.02) BS01 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024007 9mhu:D (3.02) BS02 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024008 9mhv:A (2.45) BS01 A1BLT N/A GO:0002224 ... B3Y653 39811121
    1024009 9mhv:A (2.45) BS02 A1BLT N/A GO:0002224 ... B3Y653 39811121
    1024010 9mhv:B (2.45) BS01 A1BLT N/A GO:0002224 ... B3Y653 39811121
    1024011 9mhv:B (2.45) BS02 A1BLT N/A GO:0002224 ... B3Y653 39811121
    1024012 9mhw:A (1.52) BS01 MAN N/A GO:0002224 ... Q9NR97 39811121
    1024013 9mhw:A (1.52) BS02 A1BLT N/A GO:0002224 ... Q9NR97 39811121
    1024014 9mhx:A (2.13) BS01 A1BLO N/A GO:0002224 ... Q9NR97 39811121
    1024015 9mhx:A (2.13) BS02 A1BLO N/A GO:0002224 ... Q9NR97 39811121
    1024016 9mhx:B (2.13) BS01 A1BLO N/A GO:0002224 ... Q9NR97 39811121
    1024017 9mhx:B (2.13) BS02 A1BLO N/A GO:0002224 ... Q9NR97 39811121
    1024018 9mhy:A (1.66) BS01 MAN N/A GO:0002224 ... Q9NR97 39811121
    1024019 9mhy:A (1.66) BS02 A1BLN N/A GO:0002224 ... Q9NR97 39811121
    1024020 9mhy:A (1.66) BS03 A1BLN N/A GO:0002224 ... Q9NR97 39811121
    1024021 9mhy:B (1.66) BS01 MAN N/A GO:0002224 ... Q9NR97 39811121
    1024022 9mhy:B (1.66) BS02 A1BLN N/A GO:0002224 ... Q9NR97 39811121
    1024023 9mhy:B (1.66) BS03 A1BLN N/A GO:0002224 ... Q9NR97 39811121
    1024024 9mhz:A (2.7) BS01 AV0 N/A GO:0005886 ... Q2G2X5 40185711
    1024025 9mhz:A (2.7) BS02 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024026 9mhz:A (2.7) BS03 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024027 9mhz:B (2.7) BS01 AV0 N/A GO:0005524 ... Q2G2L1 40185711
    1024028 9mhz:B (2.7) BS02 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024029 9mhz:B (2.7) BS03 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024030 9mhz:C (2.7) BS01 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024031 9mhz:C (2.7) BS02 AV0 N/A GO:0005886 ... Q2G2X5 40185711
    1024032 9mhz:C (2.7) BS03 A1AV9 N/A GO:0005886 ... Q2G2X5 40185711
    1024033 9mhz:D (2.7) BS01 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024034 9mhz:D (2.7) BS02 AGS N/A GO:0005524 ... Q2G2L1 40185711
    1024035 9mhz:D (2.7) BS03 AV0 N/A GO:0005524 ... Q2G2L1 40185711
    1024036 9mi4:A (2.94) BS01 CA N/A N/A A3FQ16 N/A
    1024037 9mi4:A (2.94) BS02 A1BLB N/A N/A A3FQ16 N/A
    1024038 9mi4:A (2.94) BS03 CA N/A N/A A3FQ16 N/A
    1024039 9mi4:A (2.94) BS04 CA N/A N/A A3FQ16 N/A
    1024040 9mi4:A (2.94) BS05 MG N/A N/A A3FQ16 N/A
    1024041 9mi5:A (2.75) BS01 A1BLC N/A N/A A3FQ16 N/A
    1024042 9mi5:A (2.75) BS02 CA N/A N/A A3FQ16 N/A
    1024043 9mi5:A (2.75) BS03 CA N/A N/A A3FQ16 N/A
    1024044 9mi8:A (3.6) BS01 dna N/A GO:0000012 ... P09874 41698892
    1024045 9mi8:A (3.6) BS02 ZN N/A GO:0000012 ... P09874 41698892
    1024046 9mi8:A (3.6) BS03 ZN N/A GO:0000012 ... P09874 41698892
    1024047 9mi8:A (3.6) BS04 ZN N/A GO:0000012 ... P09874 41698892
    1024048 9mie:C (3.93) BS01 ATP N/A GO:0000139 ... Q96P20 39932543
    1024049 9mie:C (3.93) BS02 A1BLP N/A GO:0000139 ... Q96P20 39932543
    1024050 9mig:C (3.6) BS01 ATP N/A GO:0000139 ... Q96P20 39932543
    1024051 9mig:C (3.6) BS02 A1BLQ N/A GO:0000139 ... Q96P20 39932543
    1024052 9mik:E (2.6) BS01 peptide N/A N/A P52293 41569631
    1024053 9mim:A (1.369) BS01 OW4 N/A N/A Q2IU02 41767801
    1024054 9mim:A (1.369) BS02 HEM N/A N/A Q2IU02 41767801
    1024055 9min:A (2.05) BS01 peptide N/A N/A Q53Z42 40705894
    1024056 9min:D (2.05) BS01 peptide N/A N/A N/A 40705894
    1024057 9min:F (2.05) BS01 peptide N/A N/A Q53Z42 40705894
    1024058 9min:I (2.05) BS01 peptide N/A N/A N/A 40705894
    1024059 9mio:A (1.395) BS01 OW4 N/A N/A Q2IU02 41767801
    1024060 9mio:A (1.395) BS02 HEM N/A N/A Q2IU02 41767801
    1024061 9mip:C (3.4) BS01 MN N/A GO:0000159 ... P67775 40712571
    1024062 9mip:C (3.4) BS02 MN N/A GO:0000159 ... P67775 40712571
    1024063 9miq:A (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024064 9miq:B (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024065 9miq:C (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024066 9miq:D (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024067 9miq:E (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024068 9miq:F (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024069 9miq:G (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024070 9miq:H (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024071 9miq:I (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024072 9miq:J (2.5) BS01 VOV N/A GO:0006785 ... O69830 N/A
    1024073 9miu:A (1.9) BS01 A1BLJ N/A GO:0004672 ... P53355 N/A
    1024074 9miv:A (2.02) BS01 MAN N/A GO:0019031 ... P08669 40897176
    1024075 9miv:A (2.02) BS02 BDP N/A GO:0019031 ... P08669 40897176
    1024076 9miv:B (2.02) BS01 BDP N/A GO:0019031 ... P08669 40897176
    1024077 9miv:B (2.02) BS02 MAN N/A GO:0019031 ... P08669 40897176
    1024078 9miv:C (2.02) BS01 BDP N/A GO:0019031 ... P08669 40897176
    1024079 9miv:C (2.02) BS02 MAN N/A GO:0019031 ... P08669 40897176
    1024080 9miv:D (2.02) BS01 GAL N/A N/A N/A 40897176
    1024081 9miv:F (2.02) BS01 GAL N/A N/A N/A 40897176
    1024082 9miv:H (2.02) BS01 GAL N/A N/A N/A 40897176
    1024083 9miv:H (2.02) BS02 MAN N/A N/A N/A 40897176
    1024084 9miw:A (1.24) BS01 8PF N/A GO:0005319 ... P15090 40575325
    1024085 9miw:A (1.24) BS02 8PF N/A GO:0005319 ... P15090 40575325
    1024086 9miz:A (1.4) BS01 A1BLY N/A GO:0005319 ... P15090 40575325
    1024087 9mj1:A (1.9) BS01 MAN N/A GO:0019031 ... P08669 40897176
    1024088 9mj1:A (1.9) BS02 BDP N/A GO:0019031 ... P08669 40897176
    1024089 9mj1:B (1.9) BS01 MAN N/A GO:0019031 ... P08669 40897176
    1024090 9mj1:B (1.9) BS02 BDP N/A GO:0019031 ... P08669 40897176
    1024091 9mj1:C (1.9) BS01 MAN N/A GO:0019031 ... P08669 40897176
    1024092 9mj1:C (1.9) BS02 BDP N/A GO:0019031 ... P08669 40897176
    1024093 9mj1:D (1.9) BS01 GAL N/A N/A N/A 40897176
    1024094 9mj1:F (1.9) BS01 GAL N/A N/A N/A 40897176
    1024095 9mj1:F (1.9) BS02 MAN N/A N/A N/A 40897176
    1024096 9mj1:H (1.9) BS01 GAL N/A N/A N/A 40897176
    1024097 9mj1:H (1.9) BS02 MAN N/A N/A N/A 40897176
    1024098 9mj2:A (2.58) BS01 BDP N/A GO:0019031 ... P08669 40897176
    1024099 9mj2:A (2.58) BS02 MAN N/A GO:0019031 ... P08669 40897176
    1024100 9mj2:B (2.58) BS01 BDP N/A GO:0019031 ... P08669 40897176
    1024101 9mj2:B (2.58) BS02 MAN N/A GO:0019031 ... P08669 40897176
    1024102 9mj2:C (2.58) BS01 BDP N/A GO:0019031 ... P08669 40897176
    1024103 9mj2:C (2.58) BS02 MAN N/A GO:0019031 ... P08669 40897176
    1024104 9mj5:B (3.5) BS01 dna N/A GO:0003677 ... P15927 40829805
    1024105 9mj5:C (3.5) BS01 dna N/A N/A P27694 40829805
    1024106 9mj5:S (3.5) BS01 rna N/A GO:0000166 ... P09884 40829805
    1024107 9mj5:S (3.5) BS02 dna N/A GO:0000166 ... P09884 40829805
    1024108 9mj5:S (3.5) BS03 DCP N/A GO:0000166 ... P09884 40829805
    1024109 9mj9:A (2.0) BS01 peptide N/A GO:0004315 ... P49327 39978408
    1024110 9mja:A (4.3) BS01 UHB N/A GO:0000012 ... P09874 41698892
    1024111 9mjb:A (3.46) BS01 A1A8B N/A GO:0005886 ... A0ABD7HTP3 40301322
    1024112 9mjb:A (3.46) BS02 DSL N/A GO:0005886 ... A0ABD7HTP3 40301322
    1024113 9mje:A (1.95) BS01 OW4 N/A N/A Q2IU02 41767801
    1024114 9mje:A (1.95) BS02 HEM N/A N/A Q2IU02 41767801
    1024115 9mjf:A (1.5) BS01 ANN N/A N/A Q2IU02 41767801
    1024116 9mjf:A (1.5) BS02 HEM N/A N/A Q2IU02 41767801
    1024117 9mjg:A (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024118 9mjg:B (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024119 9mjg:C (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024120 9mjg:D (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024121 9mjg:E (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024122 9mjg:F (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024123 9mjg:G (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024124 9mjg:H (2.58) BS01 A1BLX N/A GO:0004402 ... O14929 41407727
    1024125 9mjj:A (1.391) BS01 ANN N/A N/A Q2IU02 41767801
    1024126 9mjj:A (1.391) BS02 HEM N/A N/A Q2IU02 41767801
    1024127 9mjk:A (2.496) BS01 HEM N/A N/A Q2IU02 41767801
    1024128 9mjk:A (2.496) BS02 ANN N/A N/A Q2IU02 41767801
    1024129 9mjl:A (2.62) BS01 A1BME N/A GO:0005085 ... Q07889 40104782
    1024130 9mjm:A (2.17) BS01 A1BMD N/A GO:0005085 ... Q07889 40104782
    1024131 9mjn:dq (12.7) BS01 peptide N/A N/A K9L5R2 40188083
    1024132 9mjn:dq (12.7) BS02 peptide N/A N/A K9L5R2 40188083
    1024133 9mjn:dr (12.7) BS01 peptide N/A N/A K9L4F2 40188083
    1024134 9mjn:dr (12.7) BS02 peptide N/A N/A K9L4F2 40188083
    1024135 9mjn:eX (12.7) BS01 peptide N/A N/A K9L5R2 40188083
    1024136 9mjn:eX (12.7) BS02 peptide N/A N/A K9L5R2 40188083
    1024137 9mjn:eY (12.7) BS01 peptide N/A N/A K9L4F2 40188083
    1024138 9mjn:eY (12.7) BS02 peptide N/A N/A K9L4F2 40188083
    1024139 9mjn:fA (12.7) BS01 peptide N/A N/A K9L5R2 40188083
    1024140 9mjn:fA (12.7) BS02 peptide N/A N/A K9L5R2 40188083
    1024141 9mjn:fB (12.7) BS01 peptide N/A N/A K9L4F2 40188083
    1024142 9mjn:fB (12.7) BS02 peptide N/A N/A K9L4F2 40188083
    1024143 9mjp:A (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024144 9mjp:B (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024145 9mjp:C (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024146 9mjp:D (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024147 9mjp:E (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024148 9mjp:F (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024149 9mjp:G (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024150 9mjp:H (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024151 9mjp:I (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024152 9mjp:J (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024153 9mjp:K (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024154 9mjp:L (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024155 9mjp:M (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024156 9mjp:N (1.99) BS01 JT7 N/A GO:0004176 ... Q9JZ38 40795847
    1024157 9mjq:A (1.2) BS01 NOS N/A GO:0003824 ... A2EU62 N/A
    1024158 9mjs:A (1.84) BS01 ZN N/A N/A Q14191 41484101
    1024159 9mjs:A (1.84) BS02 ANP N/A N/A Q14191 41484101
    1024160 9mjt:A (1.73) BS01 ZN N/A N/A Q14191 41484101
    1024161 9mju:A (1.579) BS01 ZN N/A N/A Q14191 41484101
    1024162 9mju:A (1.579) BS02 A1BL1 N/A N/A Q14191 41484101
    1024163 9mjv:A (2.58) BS01 ZN N/A N/A Q14191 41484101
    1024164 9mjv:A (2.58) BS02 A1BL2 N/A N/A Q14191 41484101
    1024165 9mjw:A (2.0) BS01 ZN N/A N/A Q14191 41484101
    1024166 9mjw:A (2.0) BS02 A1BL3 N/A N/A Q14191 41484101
    1024167 9mjx:A (1.73) BS01 ZN N/A N/A Q14191 41484101
    1024168 9mjx:A (1.73) BS02 A1BL4 N/A N/A Q14191 41484101
    1024169 9mjx:A (1.73) BS03 A1BL5 N/A N/A Q14191 41484101
    1024170 9mjy:A (1.63) BS01 ZN N/A N/A Q14191 41484101
    1024171 9mjy:A (1.63) BS02 A1BL0 N/A N/A Q14191 41484101
    1024172 9mjy:A (1.63) BS03 A1BL0 N/A N/A Q14191 41484101
    1024173 9mjz:A (1.7) BS01 ZN N/A N/A Q14191 41484101
    1024174 9mjz:A (1.7) BS02 A1BL6 N/A N/A Q14191 41484101
    1024175 9mk0:A (1.89) BS01 ZN N/A N/A Q14191 41484101
    1024176 9mk0:A (1.89) BS02 A1BL7 N/A N/A Q14191 41484101
    1024177 9mk1:A (2.12) BS01 ZN N/A N/A Q14191 41484101
    1024178 9mk1:A (2.12) BS02 A1BL8 N/A N/A Q14191 41484101
    1024179 9mk2:A (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024180 9mk2:A (1.95) BS02 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024181 9mk2:B (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024182 9mk2:C (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024183 9mk2:D (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024184 9mk2:E (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024185 9mk2:F (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024186 9mk2:G (1.95) BS01 A1BLZ N/A GO:0004176 ... Q9JZ38 40795847
    1024187 9mk3:A (2.698) BS01 rna N/A GO:0004530 ... U2UMQ6 41807709
    1024188 9mk3:A (2.698) BS02 dna N/A GO:0004530 ... U2UMQ6 41807709
    1024189 9mk3:A (2.698) BS03 dna N/A GO:0004530 ... U2UMQ6 41807709
    1024190 9mk3:E (2.698) BS01 rna N/A GO:0004530 ... U2UMQ6 41807709
    1024191 9mk3:E (2.698) BS02 dna N/A GO:0004530 ... U2UMQ6 41807709
    1024192 9mk3:E (2.698) BS03 dna N/A GO:0004530 ... U2UMQ6 41807709
    1024193 9mk5:A (1.9) BS01 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024194 9mk5:B (1.9) BS01 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024195 9mk5:B (1.9) BS02 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024196 9mk5:C (1.9) BS01 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024197 9mk5:F (1.9) BS01 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024198 9mk5:K (1.9) BS01 A1BMH N/A GO:0004176 ... Q9JZ38 40795847
    1024199 9mk7:A (2.31) BS01 A1BLV N/A GO:0045022 ... A4D1P6 N/A
    1024200 9mka:E (2.5) BS01 peptide N/A N/A P52293 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).