SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1024201 9mka:E (2.5) BS02 peptide N/A N/A P52293 N/A
    1024202 9mkb:S0 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024203 9mkb:S1 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024204 9mkb:S2 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024205 9mkb:S4 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024206 9mkb:S5 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024207 9mkb:S6 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024208 9mkb:S7 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024209 9mkb:S8 (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024210 9mkb:SA (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024211 9mkb:SO (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024212 9mkb:SP (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024213 9mkb:SQ (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024214 9mkb:Sv (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024215 9mkb:Sw (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024216 9mkb:Sx (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024217 9mkb:Sy (3.8) BS01 ZN N/A GO:0019062 ... P10930 N/A
    1024218 9mkb:bN (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024219 9mkb:bO (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024220 9mkb:bP (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024221 9mkb:bQ (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024222 9mkb:bR (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024223 9mkb:bY (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024224 9mkb:dS (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024225 9mkb:dT (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024226 9mkb:dU (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024227 9mkb:dV (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024228 9mkb:dW (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024229 9mkb:dZ (3.8) BS01 peptide N/A GO:0046718 ... A0A7S9SVW9 N/A
    1024230 9mkb:hJ (3.8) BS01 peptide N/A N/A A0A7S9SVI2 N/A
    1024231 9mkb:hK (3.8) BS01 peptide N/A N/A A0A7S9SVI2 N/A
    1024232 9mkb:hM (3.8) BS01 peptide N/A N/A A0A7S9SVI2 N/A
    1024233 9mkb:hX (3.8) BS01 peptide N/A N/A A0A7S9SVI2 N/A
    1024234 9mkb:iC (3.8) BS01 peptide N/A N/A A0A7S9XHP4 N/A
    1024235 9mkb:iC (3.8) BS02 peptide N/A N/A A0A7S9XHP4 N/A
    1024236 9mkb:iD (3.8) BS01 peptide N/A N/A A0A7S9XHP4 N/A
    1024237 9mkb:iD (3.8) BS02 peptide N/A N/A A0A7S9XHP4 N/A
    1024238 9mkb:iF (3.8) BS01 peptide N/A N/A A0A7S9XHP4 N/A
    1024239 9mkb:iF (3.8) BS02 peptide N/A N/A A0A7S9XHP4 N/A
    1024240 9mkb:o0 (3.8) BS01 peptide N/A N/A A0A7S9SVT9 N/A
    1024241 9mkb:o0 (3.8) BS02 peptide N/A N/A A0A7S9SVT9 N/A
    1024242 9mkb:pA (3.8) BS01 peptide N/A N/A A0A7S9SVT9 N/A
    1024243 9mkb:pA (3.8) BS02 peptide N/A N/A A0A7S9SVT9 N/A
    1024244 9mkb:pB (3.8) BS01 peptide N/A N/A A0A7S9SVT9 N/A
    1024245 9mkb:pB (3.8) BS02 peptide N/A N/A A0A7S9SVT9 N/A
    1024246 9mkb:q3 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024247 9mkb:q4 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024248 9mkb:q5 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024249 9mkb:q7 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024250 9mkb:q7 (3.8) BS02 peptide N/A GO:0098003 ... P13341 N/A
    1024251 9mkb:q8 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024252 9mkb:q9 (3.8) BS01 peptide N/A GO:0098003 ... P13341 N/A
    1024253 9mkc:A (2.8) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024254 9mkc:A (2.8) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024255 9mkc:A (2.8) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024256 9mkc:A (2.8) BS04 A1BM0 N/A GO:0004197 ... Q9UDY8 41078320
    1024257 9mkc:B (2.8) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024258 9mkc:B (2.8) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024259 9mkc:B (2.8) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024260 9mkc:B (2.8) BS04 A1BM0 N/A GO:0004197 ... Q9UDY8 41078320
    1024261 9mkd:A (2.45) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024262 9mkd:A (2.45) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024263 9mkd:A (2.45) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024264 9mkd:A (2.45) BS04 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024265 9mkd:A (2.45) BS05 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024266 9mkd:A (2.45) BS06 A1BMX N/A GO:0004197 ... Q9UDY8 41078320
    1024267 9mkd:B (2.45) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024268 9mkd:B (2.45) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024269 9mkd:B (2.45) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024270 9mkd:B (2.45) BS04 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024271 9mkd:B (2.45) BS05 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024272 9mkd:B (2.45) BS06 A1BMX N/A GO:0004197 ... Q9UDY8 41078320
    1024273 9mke:A (2.34) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024274 9mke:A (2.34) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024275 9mke:A (2.34) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024276 9mke:A (2.34) BS04 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024277 9mke:A (2.34) BS05 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024278 9mke:A (2.34) BS06 A1BMY N/A GO:0004197 ... Q9UDY8 41078320
    1024279 9mke:B (2.34) BS01 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024280 9mke:B (2.34) BS02 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024281 9mke:B (2.34) BS03 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024282 9mke:B (2.34) BS04 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024283 9mke:B (2.34) BS05 CA N/A GO:0004197 ... Q9UDY8 41078320
    1024284 9mke:B (2.34) BS06 A1BMY N/A GO:0004197 ... Q9UDY8 41078320
    1024285 9mkk:0 (3.2) BS01 rna N/A GO:0003735 ... C3SME7 40415027
    1024286 9mkk:1 (3.2) BS01 rna N/A GO:0003735 ... B7MGC4 40415027
    1024287 9mkk:2 (3.2) BS01 rna N/A GO:0002181 ... P0A7Q1 40415027
    1024288 9mkk:3 (3.2) BS01 rna N/A GO:0003735 ... A0A0E2L017 40415027
    1024289 9mkk:4 (3.2) BS01 rna N/A GO:0002181 ... P0A7M9 40415027
    1024290 9mkk:B (3.2) BS01 rna N/A GO:0003735 ... C3TPN2 40415027
    1024291 9mkk:C (3.2) BS01 rna N/A GO:0003676 ... B7MCS9 40415027
    1024292 9mkk:D (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 40415027
    1024293 9mkk:E (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 40415027
    1024294 9mkk:F (3.2) BS01 rna N/A GO:0002181 ... P02358 40415027
    1024295 9mkk:G (3.2) BS01 rna N/A GO:0000028 ... P02359 40415027
    1024296 9mkk:H (3.2) BS01 rna N/A GO:0000028 ... C3SR12 40415027
    1024297 9mkk:I (3.2) BS01 rna N/A GO:0000028 ... C3SRY2 40415027
    1024298 9mkk:I (3.2) BS02 rna N/A GO:0000028 ... C3SRY2 40415027
    1024299 9mkk:J (3.2) BS01 rna N/A GO:0000028 ... C3SQT7 40415027
    1024300 9mkk:K (3.2) BS01 rna N/A GO:0003735 ... B7MCR3 40415027
    1024301 9mkk:L (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 40415027
    1024302 9mkk:M (3.2) BS01 rna N/A GO:0000049 ... A0A7U9IV78 40415027
    1024303 9mkk:M (3.2) BS02 rna N/A GO:0000049 ... A0A7U9IV78 40415027
    1024304 9mkk:N (3.2) BS01 rna N/A GO:0003735 ... A0A2X1PQW4 40415027
    1024305 9mkk:O (3.2) BS01 rna N/A GO:0000028 ... C3SSQ7 40415027
    1024306 9mkk:O (3.2) BS02 rna N/A GO:0000028 ... C3SSQ7 40415027
    1024307 9mkk:P (3.2) BS01 rna N/A GO:0000028 ... C3SYP2 40415027
    1024308 9mkk:Q (3.2) BS01 rna N/A GO:0000028 ... C3SQY7 40415027
    1024309 9mkk:R (3.2) BS01 rna N/A GO:0003735 ... A0A0E2KXL3 40415027
    1024310 9mkk:S (3.2) BS01 rna N/A GO:0000028 ... C3SQW2 40415027
    1024311 9mkk:T (3.2) BS01 rna N/A GO:0000028 ... C3TRH7 40415027
    1024312 9mkk:U (3.2) BS01 rna N/A GO:0003735 ... A0A0E2L2J1 40415027
    1024313 9mkk:c (3.2) BS01 rna N/A GO:0000027 ... P60422 40415027
    1024314 9mkk:d (3.2) BS01 rna N/A GO:0000027 ... P60438 40415027
    1024315 9mkk:e (3.2) BS01 rna N/A GO:0001070 ... P60723 40415027
    1024316 9mkk:f (3.2) BS01 rna N/A GO:0000027 ... P62399 40415027
    1024317 9mkk:f (3.2) BS02 rna N/A GO:0000027 ... P62399 40415027
    1024318 9mkk:f (3.2) BS03 rna N/A GO:0000027 ... P62399 40415027
    1024319 9mkk:g (3.2) BS01 rna N/A GO:0000027 ... P0AG55 40415027
    1024320 9mkk:i (3.2) BS01 rna N/A GO:0002181 ... P0AA10 40415027
    1024321 9mkk:j (3.2) BS01 rna N/A GO:0002181 ... P0ADY3 40415027
    1024322 9mkk:j (3.2) BS02 rna N/A GO:0002181 ... P0ADY3 40415027
    1024323 9mkk:k (3.2) BS01 rna N/A GO:0002181 ... P02413 40415027
    1024324 9mkk:l (3.2) BS01 rna N/A GO:0000027 ... P0ADY7 40415027
    1024325 9mkk:l (3.2) BS02 rna N/A GO:0000027 ... P0ADY7 40415027
    1024326 9mkk:m (3.2) BS01 rna N/A GO:0000027 ... P0AG44 40415027
    1024327 9mkk:n (3.2) BS01 rna N/A GO:0002181 ... P0C018 40415027
    1024328 9mkk:n (3.2) BS02 rna N/A GO:0002181 ... P0C018 40415027
    1024329 9mkk:o (3.2) BS01 rna N/A GO:0003735 ... P0A7K8 40415027
    1024330 9mkk:o (3.2) BS02 rna N/A GO:0003735 ... P0A7K8 40415027
    1024331 9mkk:p (3.2) BS01 rna N/A GO:0000027 ... B7MAS6 40415027
    1024332 9mkk:q (3.2) BS01 rna N/A GO:0003723 ... Q1R6F0 40415027
    1024333 9mkk:s (3.2) BS01 rna N/A GO:0003735 ... C3SQV2 40415027
    1024334 9mkk:t (3.2) BS01 rna N/A GO:0003723 ... C3SQZ7 40415027
    1024335 9mkk:u (3.2) BS01 rna N/A GO:0000027 ... P68919 40415027
    1024336 9mkk:v (3.2) BS01 rna N/A GO:0003735 ... P0A7M0 40415027
    1024337 9mkk:v (3.2) BS02 rna N/A GO:0003735 ... P0A7M0 40415027
    1024338 9mkk:w (3.2) BS01 rna N/A GO:0003735 ... A0A1X3JA73 40415027
    1024339 9mkk:x (3.2) BS01 rna N/A GO:0003735 ... C3SQY2 40415027
    1024340 9mkk:y (3.2) BS01 rna N/A GO:0003735 ... C3SR32 40415027
    1024341 9mkk:y (3.2) BS02 rna N/A GO:0003735 ... C3SR32 40415027
    1024342 9mkk:z (3.2) BS01 rna N/A GO:0003735 ... C3TE02 40415027
    1024343 9mko:A (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024344 9mko:A (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024345 9mko:B (3.21) BS01 PUB N/A GO:0009535 ... P51367 40744007
    1024346 9mko:B (3.21) BS02 PEB N/A GO:0009535 ... P51367 40744007
    1024347 9mko:B (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024348 9mko:B (3.21) BS04 PEB N/A GO:0009535 ... P51367 40744007
    1024349 9mko:C (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024350 9mko:C (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024351 9mko:C (3.21) BS03 PEB N/A GO:0009535 ... O36005 40744007
    1024352 9mko:D (3.21) BS01 PEB N/A GO:0009535 ... P51367 40744007
    1024353 9mko:D (3.21) BS02 PUB N/A GO:0009535 ... P51367 40744007
    1024354 9mko:D (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024355 9mko:D (3.21) BS04 PEB N/A GO:0009535 ... P51367 40744007
    1024356 9mko:F (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024357 9mko:F (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024358 9mko:F (3.21) BS03 PEB N/A GO:0009535 ... O36005 40744007
    1024359 9mko:G (3.21) BS01 PUB N/A GO:0009535 ... P51367 40744007
    1024360 9mko:G (3.21) BS02 PEB N/A GO:0009535 ... P51367 40744007
    1024361 9mko:G (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024362 9mko:G (3.21) BS04 PEB N/A GO:0009535 ... P51367 40744007
    1024363 9mko:I (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024364 9mko:I (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024365 9mko:J (3.21) BS01 PEB N/A GO:0009535 ... P51367 40744007
    1024366 9mko:J (3.21) BS02 PEB N/A GO:0009535 ... P51367 40744007
    1024367 9mko:J (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024368 9mko:J (3.21) BS04 PUB N/A GO:0009535 ... P51367 40744007
    1024369 9mko:L (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024370 9mko:L (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024371 9mko:L (3.21) BS03 PEB N/A GO:0009535 ... O36005 40744007
    1024372 9mko:M (3.21) BS01 PUB N/A GO:0009535 ... P51367 40744007
    1024373 9mko:M (3.21) BS02 PEB N/A GO:0009535 ... P51367 40744007
    1024374 9mko:M (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024375 9mko:O (3.21) BS01 PEB N/A GO:0009535 ... O36005 40744007
    1024376 9mko:O (3.21) BS02 PEB N/A GO:0009535 ... O36005 40744007
    1024377 9mko:Q (3.21) BS01 PEB N/A GO:0009535 ... P51367 40744007
    1024378 9mko:Q (3.21) BS02 PUB N/A GO:0009535 ... P51367 40744007
    1024379 9mko:Q (3.21) BS03 PEB N/A GO:0009535 ... P51367 40744007
    1024380 9mko:Q (3.21) BS04 PEB N/A GO:0009535 ... P51367 40744007
    1024381 9mkt:A (3.26) BS01 rna N/A GO:0004530 ... A0Q7Q2 41605928
    1024382 9mku:A (4.0) BS01 rna N/A GO:0004530 ... A0Q7Q2 41605928
    1024383 9mku:A (4.0) BS02 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024384 9mkv:A (3.68) BS01 rna N/A GO:0004530 ... A0Q7Q2 41605928
    1024385 9mkv:A (3.68) BS02 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024386 9mkv:A (3.68) BS03 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024387 9mkw:A (3.63) BS01 rna N/A GO:0004530 ... A0Q7Q2 41605928
    1024388 9mkw:A (3.63) BS02 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024389 9mkw:A (3.63) BS03 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024390 9mkx:A (3.21) BS01 rna N/A GO:0004530 ... A0Q7Q2 41605928
    1024391 9mkx:A (3.21) BS02 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024392 9mkx:A (3.21) BS03 dna N/A GO:0004530 ... A0Q7Q2 41605928
    1024393 9mlc:A (2.4) BS01 dna N/A N/A N/A N/A
    1024394 9mlc:A (2.4) BS02 rna N/A N/A N/A N/A
    1024395 9mlc:A (2.4) BS03 dna N/A N/A N/A N/A
    1024396 9mlc:A (2.4) BS04 ZN N/A N/A N/A N/A
    1024397 9mlc:A (2.4) BS05 ZN N/A N/A N/A N/A
    1024398 9mlc:A (2.4) BS06 MG N/A N/A N/A N/A
    1024399 9mlc:B (2.4) BS01 rna N/A GO:0000781 ... I3LGP4 N/A
    1024400 9mlc:B (2.4) BS02 dna N/A GO:0000781 ... I3LGP4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).