SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1025601 9msj:J (3.1) BS05 ZN N/A GO:0000287 ... P0A8T7 40759887
    1025602 9msj:J (3.1) BS06 ATP N/A GO:0000287 ... P0A8T7 40759887
    1025603 9msj:J (3.1) BS07 ADP N/A GO:0000287 ... P0A8T7 40759887
    1025604 9msj:M (3.1) BS01 dna N/A GO:0000976 ... P24255 40759887
    1025605 9msj:M (3.1) BS02 dna N/A GO:0000976 ... P24255 40759887
    1025606 9msq:A (2.53) BS01 990 N/A GO:0005524 ... P46598 40397669
    1025607 9msr:A (1.93) BS01 A1BRC N/A GO:0004672 ... P00533 40801664
    1025608 9mss:A (2.09) BS01 A1BYO N/A GO:0004672 ... P00533 40801664
    1025609 9mst:A (2.57) BS01 A1BYN N/A GO:0004672 ... P00533 40801664
    1025610 9msu:A (1.56) BS01 819 N/A GO:0005524 ... P46598 40397669
    1025611 9msv:A (2.07) BS01 2KL N/A GO:0005524 ... P46598 40397669
    1025612 9msx:A (2.5) BS01 A1BPC N/A GO:0005524 ... P46598 40397669
    1025613 9msx:B (2.5) BS01 A1BPC N/A GO:0005524 ... P46598 40397669
    1025614 9msy:I (3.4) BS01 MAN N/A N/A N/A 40373112
    1025615 9msy:M (3.4) BS01 MAN N/A N/A N/A 40373112
    1025616 9msy:Q (3.4) BS01 MAN N/A N/A N/A 40373112
    1025617 9msz:A (1.1) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025618 9msz:B (1.1) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025619 9mt0:A (1.2) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025620 9mt0:B (1.2) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025621 9mt1:A (1.405) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025622 9mt1:B (1.405) BS01 HEC N/A GO:0005758 ... A0A1I8N8V4 N/A
    1025623 9mt2:C (2.9) BS01 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025624 9mt2:C (2.9) BS02 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025625 9mt2:F (2.9) BS01 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025626 9mt2:F (2.9) BS02 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025627 9mt2:I (2.9) BS01 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025628 9mt2:I (2.9) BS02 ZN N/A GO:0019031 ... Q6IUF7 40781447
    1025629 9mt3:A (2.02) BS01 99B N/A GO:0005524 ... P46598 40397669
    1025630 9mt6:C (3.0) BS01 ZN N/A GO:0019031 ... P26313 40781447
    1025631 9mt6:C (3.0) BS02 ZN N/A GO:0019031 ... P26313 40781447
    1025632 9mt6:F (3.0) BS01 ZN N/A GO:0019031 ... P26313 40781447
    1025633 9mt6:F (3.0) BS02 ZN N/A GO:0019031 ... P26313 40781447
    1025634 9mt6:I (3.0) BS01 ZN N/A GO:0019031 ... P26313 40781447
    1025635 9mt6:I (3.0) BS02 ZN N/A GO:0019031 ... P26313 40781447
    1025636 9mt8:A (3.19) BS01 CA N/A GO:0002407 ... Q8TD43 41174278
    1025637 9mt8:B (3.19) BS01 CA N/A GO:0002407 ... Q8TD43 41174278
    1025638 9mt8:C (3.19) BS01 CA N/A GO:0002407 ... Q8TD43 41174278
    1025639 9mt8:D (3.19) BS01 CA N/A GO:0002407 ... Q8TD43 41174278
    1025640 9mt9:A (1.78) BS01 A8K N/A GO:0005524 ... P46598 40397669
    1025641 9mtb:A (2.53) BS01 ANP N/A GO:0005524 ... P46598 40397669
    1025642 9mtc:A (2.63) BS01 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025643 9mtc:A (2.63) BS02 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025644 9mtc:B (2.63) BS01 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025645 9mtc:B (2.63) BS02 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025646 9mtc:C (2.63) BS01 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025647 9mtc:C (2.63) BS02 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025648 9mtc:D (2.63) BS01 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025649 9mtc:D (2.63) BS02 ATP N/A GO:0002407 ... Q8TD43 41174278
    1025650 9mto:A (1.69) BS01 COA N/A GO:0004596 ... Q83DD7 N/A
    1025651 9mto:B (1.69) BS01 COA N/A GO:0004596 ... Q83DD7 N/A
    1025652 9mtp:10 (2.4) BS01 rna N/A GO:0003735 ... P60493 40536958
    1025653 9mtp:10 (2.4) BS02 rna N/A GO:0003735 ... P60493 40536958
    1025654 9mtp:10 (2.4) BS03 MG N/A GO:0003735 ... P60493 40536958
    1025655 9mtp:10 (2.4) BS04 MG N/A GO:0003735 ... P60493 40536958
    1025656 9mtp:10 (2.4) BS05 MG N/A GO:0003735 ... P60493 40536958
    1025657 9mtp:11 (2.4) BS01 rna N/A GO:0003735 ... P60494 40536958
    1025658 9mtp:11 (2.4) BS02 MG N/A GO:0003735 ... P60494 40536958
    1025659 9mtp:12 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 40536958
    1025660 9mtp:12 (2.4) BS02 MG N/A GO:0003735 ... Q5SHP6 40536958
    1025661 9mtp:12 (2.4) BS03 MG N/A GO:0003735 ... Q5SHP6 40536958
    1025662 9mtp:13 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 40536958
    1025663 9mtp:13 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 40536958
    1025664 9mtp:13 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 40536958
    1025665 9mtp:13 (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ6 40536958
    1025666 9mtp:13 (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ6 40536958
    1025667 9mtp:14 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 40536958
    1025668 9mtp:14 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 40536958
    1025669 9mtp:15 (2.4) BS01 rna N/A GO:0003735 ... P80339 40536958
    1025670 9mtp:15 (2.4) BS02 MG N/A GO:0003735 ... P80339 40536958
    1025671 9mtp:15 (2.4) BS03 MG N/A GO:0003735 ... P80339 40536958
    1025672 9mtp:15 (2.4) BS04 ZN N/A GO:0003735 ... P80339 40536958
    1025673 9mtp:16 (2.4) BS01 rna N/A GO:0003735 ... P35871 40536958
    1025674 9mtp:16 (2.4) BS02 MG N/A GO:0003735 ... P35871 40536958
    1025675 9mtp:16 (2.4) BS03 MG N/A GO:0003735 ... P35871 40536958
    1025676 9mtp:16 (2.4) BS04 MG N/A GO:0003735 ... P35871 40536958
    1025677 9mtp:16 (2.4) BS05 ZN N/A GO:0003735 ... P35871 40536958
    1025678 9mtp:17 (2.4) BS01 rna N/A GO:0003735 ... P80340 40536958
    1025679 9mtp:17 (2.4) BS02 MG N/A GO:0003735 ... P80340 40536958
    1025680 9mtp:17 (2.4) BS03 MG N/A GO:0003735 ... P80340 40536958
    1025681 9mtp:17 (2.4) BS04 MG N/A GO:0003735 ... P80340 40536958
    1025682 9mtp:18 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 40536958
    1025683 9mtp:18 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 40536958
    1025684 9mtp:18 (2.4) BS03 MG N/A GO:0003735 ... Q5SKU1 40536958
    1025685 9mtp:18 (2.4) BS04 MG N/A GO:0003735 ... Q5SKU1 40536958
    1025686 9mtp:19 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 40536958
    1025687 9mtp:19 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 40536958
    1025688 9mtp:1D (2.4) BS01 rna N/A GO:0002181 ... P60405 40536958
    1025689 9mtp:1D (2.4) BS02 rna N/A GO:0002181 ... P60405 40536958
    1025690 9mtp:1D (2.4) BS03 MG N/A GO:0002181 ... P60405 40536958
    1025691 9mtp:1D (2.4) BS04 MG N/A GO:0002181 ... P60405 40536958
    1025692 9mtp:1D (2.4) BS05 MG N/A GO:0002181 ... P60405 40536958
    1025693 9mtp:1D (2.4) BS06 MG N/A GO:0002181 ... P60405 40536958
    1025694 9mtp:1D (2.4) BS07 MG N/A GO:0002181 ... P60405 40536958
    1025695 9mtp:1D (2.4) BS08 MG N/A GO:0002181 ... P60405 40536958
    1025696 9mtp:1D (2.4) BS09 MG N/A GO:0002181 ... P60405 40536958
    1025697 9mtp:1D (2.4) BS10 MG N/A GO:0002181 ... P60405 40536958
    1025698 9mtp:1D (2.4) BS11 MG N/A GO:0002181 ... P60405 40536958
    1025699 9mtp:1D (2.4) BS12 MG N/A GO:0002181 ... P60405 40536958
    1025700 9mtp:1D (2.4) BS13 MG N/A GO:0002181 ... P60405 40536958
    1025701 9mtp:1E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 40536958
    1025702 9mtp:1E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 40536958
    1025703 9mtp:1E (2.4) BS03 MG N/A GO:0003735 ... Q5SHN8 40536958
    1025704 9mtp:1E (2.4) BS04 MG N/A GO:0003735 ... Q5SHN8 40536958
    1025705 9mtp:1F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 40536958
    1025706 9mtp:1F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025707 9mtp:1F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025708 9mtp:1F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025709 9mtp:1F (2.4) BS05 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025710 9mtp:1F (2.4) BS06 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025711 9mtp:1F (2.4) BS07 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025712 9mtp:1F (2.4) BS08 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025713 9mtp:1F (2.4) BS09 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025714 9mtp:1F (2.4) BS10 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025715 9mtp:1F (2.4) BS11 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025716 9mtp:1F (2.4) BS12 MG N/A GO:0003735 ... Q5SHN9 40536958
    1025717 9mtp:1G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1025718 9mtp:1G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1025719 9mtp:1G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1025720 9mtp:1G (2.4) BS04 MG N/A GO:0000049 ... Q5SHQ0 40536958
    1025721 9mtp:1G (2.4) BS05 MG N/A GO:0000049 ... Q5SHQ0 40536958
    1025722 9mtp:1H (2.4) BS01 rna N/A GO:0002181 ... P0DOY8 40536958
    1025723 9mtp:1I (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ1 40536958
    1025724 9mtp:1N (2.4) BS01 rna N/A GO:0003729 ... P60488 40536958
    1025725 9mtp:1N (2.4) BS02 MG N/A GO:0003729 ... P60488 40536958
    1025726 9mtp:1N (2.4) BS03 MG N/A GO:0003729 ... P60488 40536958
    1025727 9mtp:1N (2.4) BS04 MG N/A GO:0003729 ... P60488 40536958
    1025728 9mtp:1O (2.4) BS01 rna N/A GO:0003735 ... Q5SHP8 40536958
    1025729 9mtp:1O (2.4) BS02 rna N/A GO:0003735 ... Q5SHP8 40536958
    1025730 9mtp:1O (2.4) BS03 MG N/A GO:0003735 ... Q5SHP8 40536958
    1025731 9mtp:1P (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ7 40536958
    1025732 9mtp:1P (2.4) BS02 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1025733 9mtp:1P (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1025734 9mtp:1P (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1025735 9mtp:1P (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1025736 9mtp:1Q (2.4) BS01 rna N/A GO:0003735 ... P60489 40536958
    1025737 9mtp:1Q (2.4) BS02 rna N/A GO:0003735 ... P60489 40536958
    1025738 9mtp:1Q (2.4) BS03 MG N/A GO:0003735 ... P60489 40536958
    1025739 9mtp:1Q (2.4) BS04 MG N/A GO:0003735 ... P60489 40536958
    1025740 9mtp:1Q (2.4) BS05 MG N/A GO:0003735 ... P60489 40536958
    1025741 9mtp:1Q (2.4) BS06 MG N/A GO:0003735 ... P60489 40536958
    1025742 9mtp:1Q (2.4) BS07 MG N/A GO:0003735 ... P60489 40536958
    1025743 9mtp:1R (2.4) BS01 rna N/A GO:0003735 ... Q9Z9H5 40536958
    1025744 9mtp:1R (2.4) BS02 MG N/A GO:0003735 ... Q9Z9H5 40536958
    1025745 9mtp:1R (2.4) BS03 MG N/A GO:0003735 ... Q9Z9H5 40536958
    1025746 9mtp:1S (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1025747 9mtp:1S (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1025748 9mtp:1S (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ4 40536958
    1025749 9mtp:1S (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ4 40536958
    1025750 9mtp:1T (2.4) BS01 rna N/A GO:0003735 ... P60490 40536958
    1025751 9mtp:1T (2.4) BS02 rna N/A GO:0003735 ... P60490 40536958
    1025752 9mtp:1U (2.4) BS01 rna N/A GO:0000027 ... P60491 40536958
    1025753 9mtp:1U (2.4) BS02 MG N/A GO:0000027 ... P60491 40536958
    1025754 9mtp:1U (2.4) BS03 MG N/A GO:0000027 ... P60491 40536958
    1025755 9mtp:1U (2.4) BS04 MG N/A GO:0000027 ... P60491 40536958
    1025756 9mtp:1U (2.4) BS05 MG N/A GO:0000027 ... P60491 40536958
    1025757 9mtp:1U (2.4) BS06 MG N/A GO:0000027 ... P60491 40536958
    1025758 9mtp:1U (2.4) BS07 MG N/A GO:0000027 ... P60491 40536958
    1025759 9mtp:1U (2.4) BS08 MG N/A GO:0000027 ... P60491 40536958
    1025760 9mtp:1U (2.4) BS09 MG N/A GO:0000027 ... P60491 40536958
    1025761 9mtp:1V (2.4) BS01 rna N/A GO:0003723 ... P60492 40536958
    1025762 9mtp:1V (2.4) BS02 MG N/A GO:0003723 ... P60492 40536958
    1025763 9mtp:1V (2.4) BS03 MG N/A GO:0003723 ... P60492 40536958
    1025764 9mtp:1V (2.4) BS04 MG N/A GO:0003723 ... P60492 40536958
    1025765 9mtp:1V (2.4) BS05 MG N/A GO:0003723 ... P60492 40536958
    1025766 9mtp:1V (2.4) BS06 MG N/A GO:0003723 ... P60492 40536958
    1025767 9mtp:1V (2.4) BS07 MG N/A GO:0003723 ... P60492 40536958
    1025768 9mtp:1V (2.4) BS08 MG N/A GO:0003723 ... P60492 40536958
    1025769 9mtp:1W (2.4) BS01 rna N/A GO:0003735 ... Q5SHP3 40536958
    1025770 9mtp:1W (2.4) BS02 MG N/A GO:0003735 ... Q5SHP3 40536958
    1025771 9mtp:1W (2.4) BS03 MG N/A GO:0003735 ... Q5SHP3 40536958
    1025772 9mtp:1W (2.4) BS04 MG N/A GO:0003735 ... Q5SHP3 40536958
    1025773 9mtp:1W (2.4) BS05 MG N/A GO:0003735 ... Q5SHP3 40536958
    1025774 9mtp:1W (2.4) BS06 MG N/A GO:0003735 ... Q5SHP3 40536958
    1025775 9mtp:1X (2.4) BS01 rna N/A GO:0003735 ... Q5SHP0 40536958
    1025776 9mtp:1X (2.4) BS02 MG N/A GO:0003735 ... Q5SHP0 40536958
    1025777 9mtp:1X (2.4) BS03 MG N/A GO:0003735 ... Q5SHP0 40536958
    1025778 9mtp:1X (2.4) BS04 MG N/A GO:0003735 ... Q5SHP0 40536958
    1025779 9mtp:1X (2.4) BS05 MG N/A GO:0003735 ... Q5SHP0 40536958
    1025780 9mtp:1X (2.4) BS06 MG N/A GO:0003735 ... Q5SHP0 40536958
    1025781 9mtp:1Y (2.4) BS01 rna N/A GO:0003723 ... Q5SHP9 40536958
    1025782 9mtp:1Y (2.4) BS02 MG N/A GO:0003723 ... Q5SHP9 40536958
    1025783 9mtp:1Y (2.4) BS03 ZN N/A GO:0003723 ... Q5SHP9 40536958
    1025784 9mtp:1Z (2.4) BS01 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1025785 9mtp:1Z (2.4) BS02 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1025786 9mtp:1b (2.4) BS01 rna N/A GO:0003735 ... P80371 40536958
    1025787 9mtp:1b (2.4) BS02 MG N/A GO:0003735 ... P80371 40536958
    1025788 9mtp:1b (2.4) BS03 MG N/A GO:0003735 ... P80371 40536958
    1025789 9mtp:1c (2.4) BS01 rna N/A GO:0003676 ... P80372 40536958
    1025790 9mtp:1d (2.4) BS01 rna N/A GO:0003723 ... P80373 40536958
    1025791 9mtp:1d (2.4) BS02 SF4 N/A GO:0003723 ... P80373 40536958
    1025792 9mtp:1e (2.4) BS01 rna N/A GO:0003723 ... Q5SHQ5 40536958
    1025793 9mtp:1e (2.4) BS02 MG N/A GO:0003723 ... Q5SHQ5 40536958
    1025794 9mtp:1e (2.4) BS03 MG N/A GO:0003723 ... Q5SHQ5 40536958
    1025795 9mtp:1f (2.4) BS01 rna N/A GO:0003735 ... Q5SLP8 40536958
    1025796 9mtp:1g (2.4) BS01 rna N/A GO:0000049 ... P17291 40536958
    1025797 9mtp:1h (2.4) BS01 rna N/A GO:0003735 ... P0DOY9 40536958
    1025798 9mtp:1i (2.4) BS01 rna N/A GO:0003723 ... P80374 40536958
    1025799 9mtp:1i (2.4) BS02 rna N/A GO:0003723 ... P80374 40536958
    1025800 9mtp:1j (2.4) BS01 rna N/A GO:0000049 ... Q5SHN7 40536958

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).