SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1026001 9mtq:1O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 40536958
    1026002 9mtq:1O (2.55) BS03 MG N/A GO:0003735 ... Q5SHP8 40536958
    1026003 9mtq:1O (2.55) BS04 MG N/A GO:0003735 ... Q5SHP8 40536958
    1026004 9mtq:1P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 40536958
    1026005 9mtq:1P (2.55) BS02 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1026006 9mtq:1P (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1026007 9mtq:1P (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1026008 9mtq:1P (2.55) BS05 MG N/A GO:0003735 ... Q5SHQ7 40536958
    1026009 9mtq:1Q (2.55) BS01 rna N/A GO:0003735 ... P60489 40536958
    1026010 9mtq:1Q (2.55) BS02 rna N/A GO:0003735 ... P60489 40536958
    1026011 9mtq:1Q (2.55) BS03 MG N/A GO:0003735 ... P60489 40536958
    1026012 9mtq:1Q (2.55) BS04 MG N/A GO:0003735 ... P60489 40536958
    1026013 9mtq:1Q (2.55) BS05 MG N/A GO:0003735 ... P60489 40536958
    1026014 9mtq:1Q (2.55) BS06 MG N/A GO:0003735 ... P60489 40536958
    1026015 9mtq:1Q (2.55) BS07 MG N/A GO:0003735 ... P60489 40536958
    1026016 9mtq:1R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 40536958
    1026017 9mtq:1R (2.55) BS02 MG N/A GO:0003735 ... Q9Z9H5 40536958
    1026018 9mtq:1R (2.55) BS03 MG N/A GO:0003735 ... Q9Z9H5 40536958
    1026019 9mtq:1S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1026020 9mtq:1S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1026021 9mtq:1S (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ4 40536958
    1026022 9mtq:1S (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ4 40536958
    1026023 9mtq:1T (2.55) BS01 rna N/A GO:0003735 ... P60490 40536958
    1026024 9mtq:1T (2.55) BS02 rna N/A GO:0003735 ... P60490 40536958
    1026025 9mtq:1U (2.55) BS01 rna N/A GO:0000027 ... P60491 40536958
    1026026 9mtq:1U (2.55) BS02 MG N/A GO:0000027 ... P60491 40536958
    1026027 9mtq:1U (2.55) BS03 MG N/A GO:0000027 ... P60491 40536958
    1026028 9mtq:1U (2.55) BS04 MG N/A GO:0000027 ... P60491 40536958
    1026029 9mtq:1U (2.55) BS05 MG N/A GO:0000027 ... P60491 40536958
    1026030 9mtq:1U (2.55) BS06 MG N/A GO:0000027 ... P60491 40536958
    1026031 9mtq:1U (2.55) BS07 MG N/A GO:0000027 ... P60491 40536958
    1026032 9mtq:1U (2.55) BS08 MG N/A GO:0000027 ... P60491 40536958
    1026033 9mtq:1U (2.55) BS09 MG N/A GO:0000027 ... P60491 40536958
    1026034 9mtq:1V (2.55) BS01 rna N/A GO:0003723 ... P60492 40536958
    1026035 9mtq:1V (2.55) BS02 MG N/A GO:0003723 ... P60492 40536958
    1026036 9mtq:1V (2.55) BS03 MG N/A GO:0003723 ... P60492 40536958
    1026037 9mtq:1V (2.55) BS04 MG N/A GO:0003723 ... P60492 40536958
    1026038 9mtq:1V (2.55) BS05 MG N/A GO:0003723 ... P60492 40536958
    1026039 9mtq:1V (2.55) BS06 MG N/A GO:0003723 ... P60492 40536958
    1026040 9mtq:1V (2.55) BS07 MG N/A GO:0003723 ... P60492 40536958
    1026041 9mtq:1W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 40536958
    1026042 9mtq:1W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026043 9mtq:1W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026044 9mtq:1W (2.55) BS04 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026045 9mtq:1W (2.55) BS05 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026046 9mtq:1W (2.55) BS06 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026047 9mtq:1W (2.55) BS07 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026048 9mtq:1X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 40536958
    1026049 9mtq:1X (2.55) BS02 MG N/A GO:0003735 ... Q5SHP0 40536958
    1026050 9mtq:1X (2.55) BS03 MG N/A GO:0003735 ... Q5SHP0 40536958
    1026051 9mtq:1X (2.55) BS04 MG N/A GO:0003735 ... Q5SHP0 40536958
    1026052 9mtq:1X (2.55) BS05 MG N/A GO:0003735 ... Q5SHP0 40536958
    1026053 9mtq:1Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 40536958
    1026054 9mtq:1Y (2.55) BS02 MG N/A GO:0003723 ... Q5SHP9 40536958
    1026055 9mtq:1Y (2.55) BS03 ZN N/A GO:0003723 ... Q5SHP9 40536958
    1026056 9mtq:1Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1026057 9mtq:1Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1026058 9mtq:1b (2.55) BS01 rna N/A GO:0003735 ... P80371 40536958
    1026059 9mtq:1b (2.55) BS02 MG N/A GO:0003735 ... P80371 40536958
    1026060 9mtq:1c (2.55) BS01 rna N/A GO:0003676 ... P80372 40536958
    1026061 9mtq:1d (2.55) BS01 rna N/A GO:0003723 ... P80373 40536958
    1026062 9mtq:1d (2.55) BS02 SF4 N/A GO:0003723 ... P80373 40536958
    1026063 9mtq:1e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 40536958
    1026064 9mtq:1e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 40536958
    1026065 9mtq:1e (2.55) BS03 MG N/A GO:0003723 ... Q5SHQ5 40536958
    1026066 9mtq:1f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 40536958
    1026067 9mtq:1f (2.55) BS02 MG N/A GO:0003735 ... Q5SLP8 40536958
    1026068 9mtq:1g (2.55) BS01 rna N/A GO:0000049 ... P17291 40536958
    1026069 9mtq:1h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 40536958
    1026070 9mtq:1i (2.55) BS01 rna N/A GO:0003723 ... P80374 40536958
    1026071 9mtq:1i (2.55) BS02 rna N/A GO:0003723 ... P80374 40536958
    1026072 9mtq:1j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 40536958
    1026073 9mtq:1k (2.55) BS01 rna N/A GO:0003735 ... P80376 40536958
    1026074 9mtq:1k (2.55) BS02 MG N/A GO:0003735 ... P80376 40536958
    1026075 9mtq:1l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 40536958
    1026076 9mtq:1m (2.55) BS01 rna N/A GO:0000049 ... P80377 40536958
    1026077 9mtq:1m (2.55) BS02 rna N/A GO:0000049 ... P80377 40536958
    1026078 9mtq:1m (2.55) BS03 rna N/A GO:0000049 ... P80377 40536958
    1026079 9mtq:1m (2.55) BS04 MG N/A GO:0000049 ... P80377 40536958
    1026080 9mtq:1n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 40536958
    1026081 9mtq:1n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 40536958
    1026082 9mtq:1o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 40536958
    1026083 9mtq:1o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 40536958
    1026084 9mtq:1p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 40536958
    1026085 9mtq:1q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 40536958
    1026086 9mtq:1r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 40536958
    1026087 9mtq:1s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 40536958
    1026088 9mtq:1t (2.55) BS01 rna N/A GO:0003723 ... P80380 40536958
    1026089 9mtq:1t (2.55) BS02 MG N/A GO:0003723 ... P80380 40536958
    1026090 9mtq:1w (2.55) BS01 rna N/A GO:0003747 ... P96077 40536958
    1026091 9mtq:1w (2.55) BS02 rna N/A GO:0003747 ... P96077 40536958
    1026092 9mtq:1w (2.55) BS03 rna N/A GO:0003747 ... P96077 40536958
    1026093 9mtq:1w (2.55) BS04 rna N/A GO:0003747 ... P96077 40536958
    1026094 9mtq:1w (2.55) BS05 peptide N/A GO:0003747 ... P96077 40536958
    1026095 9mtq:1w (2.55) BS06 MG N/A GO:0003747 ... P96077 40536958
    1026096 9mtq:1w (2.55) BS07 MG N/A GO:0003747 ... P96077 40536958
    1026097 9mtq:20 (2.55) BS01 rna N/A GO:0003735 ... P60493 40536958
    1026098 9mtq:20 (2.55) BS02 rna N/A GO:0003735 ... P60493 40536958
    1026099 9mtq:21 (2.55) BS01 rna N/A GO:0003735 ... P60494 40536958
    1026100 9mtq:21 (2.55) BS02 MG N/A GO:0003735 ... P60494 40536958
    1026101 9mtq:22 (2.55) BS01 rna N/A GO:0003735 ... Q5SHP6 40536958
    1026102 9mtq:23 (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ6 40536958
    1026103 9mtq:23 (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ6 40536958
    1026104 9mtq:23 (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ6 40536958
    1026105 9mtq:23 (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ6 40536958
    1026106 9mtq:24 (2.55) BS01 rna N/A GO:0003735 ... Q5SJE1 40536958
    1026107 9mtq:24 (2.55) BS02 ZN N/A GO:0003735 ... Q5SJE1 40536958
    1026108 9mtq:25 (2.55) BS01 rna N/A GO:0003735 ... P80339 40536958
    1026109 9mtq:25 (2.55) BS02 MG N/A GO:0003735 ... P80339 40536958
    1026110 9mtq:25 (2.55) BS03 ZN N/A GO:0003735 ... P80339 40536958
    1026111 9mtq:26 (2.55) BS01 rna N/A GO:0003735 ... P35871 40536958
    1026112 9mtq:26 (2.55) BS02 ZN N/A GO:0003735 ... P35871 40536958
    1026113 9mtq:27 (2.55) BS01 rna N/A GO:0003735 ... P80340 40536958
    1026114 9mtq:27 (2.55) BS02 MG N/A GO:0003735 ... P80340 40536958
    1026115 9mtq:28 (2.55) BS01 rna N/A GO:0003735 ... Q5SKU1 40536958
    1026116 9mtq:29 (2.55) BS01 rna N/A GO:0003735 ... Q5SHR2 40536958
    1026117 9mtq:29 (2.55) BS02 ZN N/A GO:0003735 ... Q5SHR2 40536958
    1026118 9mtq:2D (2.55) BS01 rna N/A GO:0002181 ... P60405 40536958
    1026119 9mtq:2D (2.55) BS02 rna N/A GO:0002181 ... P60405 40536958
    1026120 9mtq:2D (2.55) BS03 MG N/A GO:0002181 ... P60405 40536958
    1026121 9mtq:2D (2.55) BS04 MG N/A GO:0002181 ... P60405 40536958
    1026122 9mtq:2D (2.55) BS05 MG N/A GO:0002181 ... P60405 40536958
    1026123 9mtq:2D (2.55) BS06 MG N/A GO:0002181 ... P60405 40536958
    1026124 9mtq:2D (2.55) BS07 MG N/A GO:0002181 ... P60405 40536958
    1026125 9mtq:2E (2.55) BS01 rna N/A GO:0003735 ... Q5SHN8 40536958
    1026126 9mtq:2E (2.55) BS02 MG N/A GO:0003735 ... Q5SHN8 40536958
    1026127 9mtq:2F (2.55) BS01 rna N/A GO:0003735 ... Q5SHN9 40536958
    1026128 9mtq:2F (2.55) BS02 MG N/A GO:0003735 ... Q5SHN9 40536958
    1026129 9mtq:2F (2.55) BS03 MG N/A GO:0003735 ... Q5SHN9 40536958
    1026130 9mtq:2F (2.55) BS04 MG N/A GO:0003735 ... Q5SHN9 40536958
    1026131 9mtq:2F (2.55) BS05 MG N/A GO:0003735 ... Q5SHN9 40536958
    1026132 9mtq:2F (2.55) BS06 MG N/A GO:0003735 ... Q5SHN9 40536958
    1026133 9mtq:2G (2.55) BS01 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1026134 9mtq:2G (2.55) BS02 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1026135 9mtq:2G (2.55) BS03 rna N/A GO:0000049 ... Q5SHQ0 40536958
    1026136 9mtq:2G (2.55) BS04 MG N/A GO:0000049 ... Q5SHQ0 40536958
    1026137 9mtq:2H (2.55) BS01 rna N/A GO:0002181 ... P0DOY8 40536958
    1026138 9mtq:2I (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ1 40536958
    1026139 9mtq:2N (2.55) BS01 rna N/A GO:0003729 ... P60488 40536958
    1026140 9mtq:2O (2.55) BS01 rna N/A GO:0003735 ... Q5SHP8 40536958
    1026141 9mtq:2O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 40536958
    1026142 9mtq:2P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 40536958
    1026143 9mtq:2Q (2.55) BS01 rna N/A GO:0003735 ... P60489 40536958
    1026144 9mtq:2Q (2.55) BS02 rna N/A GO:0003735 ... P60489 40536958
    1026145 9mtq:2Q (2.55) BS03 MG N/A GO:0003735 ... P60489 40536958
    1026146 9mtq:2Q (2.55) BS04 MG N/A GO:0003735 ... P60489 40536958
    1026147 9mtq:2R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 40536958
    1026148 9mtq:2S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1026149 9mtq:2S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 40536958
    1026150 9mtq:2T (2.55) BS01 rna N/A GO:0003735 ... P60490 40536958
    1026151 9mtq:2T (2.55) BS02 rna N/A GO:0003735 ... P60490 40536958
    1026152 9mtq:2T (2.55) BS03 MG N/A GO:0003735 ... P60490 40536958
    1026153 9mtq:2U (2.55) BS01 rna N/A GO:0000027 ... P60491 40536958
    1026154 9mtq:2U (2.55) BS02 MG N/A GO:0000027 ... P60491 40536958
    1026155 9mtq:2U (2.55) BS03 MG N/A GO:0000027 ... P60491 40536958
    1026156 9mtq:2U (2.55) BS04 MG N/A GO:0000027 ... P60491 40536958
    1026157 9mtq:2V (2.55) BS01 rna N/A GO:0003723 ... P60492 40536958
    1026158 9mtq:2V (2.55) BS02 MG N/A GO:0003723 ... P60492 40536958
    1026159 9mtq:2V (2.55) BS03 MG N/A GO:0003723 ... P60492 40536958
    1026160 9mtq:2V (2.55) BS04 MG N/A GO:0003723 ... P60492 40536958
    1026161 9mtq:2W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 40536958
    1026162 9mtq:2W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026163 9mtq:2W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026164 9mtq:2W (2.55) BS04 MG N/A GO:0003735 ... Q5SHP3 40536958
    1026165 9mtq:2X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 40536958
    1026166 9mtq:2Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 40536958
    1026167 9mtq:2Y (2.55) BS02 ZN N/A GO:0003723 ... Q5SHP9 40536958
    1026168 9mtq:2Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1026169 9mtq:2Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 40536958
    1026170 9mtq:2b (2.55) BS01 rna N/A GO:0003735 ... P80371 40536958
    1026171 9mtq:2c (2.55) BS01 rna N/A GO:0003676 ... P80372 40536958
    1026172 9mtq:2d (2.55) BS01 rna N/A GO:0003723 ... P80373 40536958
    1026173 9mtq:2d (2.55) BS02 SF4 N/A GO:0003723 ... P80373 40536958
    1026174 9mtq:2e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 40536958
    1026175 9mtq:2e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 40536958
    1026176 9mtq:2f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 40536958
    1026177 9mtq:2f (2.55) BS02 MG N/A GO:0003735 ... Q5SLP8 40536958
    1026178 9mtq:2g (2.55) BS01 rna N/A GO:0000049 ... P17291 40536958
    1026179 9mtq:2h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 40536958
    1026180 9mtq:2i (2.55) BS01 rna N/A GO:0003723 ... P80374 40536958
    1026181 9mtq:2i (2.55) BS02 rna N/A GO:0003723 ... P80374 40536958
    1026182 9mtq:2j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 40536958
    1026183 9mtq:2k (2.55) BS01 rna N/A GO:0003735 ... P80376 40536958
    1026184 9mtq:2k (2.55) BS02 MG N/A GO:0003735 ... P80376 40536958
    1026185 9mtq:2l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 40536958
    1026186 9mtq:2l (2.55) BS02 MG N/A GO:0000049 ... Q5SHN3 40536958
    1026187 9mtq:2m (2.55) BS01 rna N/A GO:0000049 ... P80377 40536958
    1026188 9mtq:2n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 40536958
    1026189 9mtq:2n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 40536958
    1026190 9mtq:2o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 40536958
    1026191 9mtq:2o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 40536958
    1026192 9mtq:2p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 40536958
    1026193 9mtq:2q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 40536958
    1026194 9mtq:2q (2.55) BS02 MG N/A GO:0003735 ... P0DOY7 40536958
    1026195 9mtq:2q (2.55) BS03 MG N/A GO:0003735 ... P0DOY7 40536958
    1026196 9mtq:2r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 40536958
    1026197 9mtq:2s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 40536958
    1026198 9mtq:2t (2.55) BS01 rna N/A GO:0003723 ... P80380 40536958
    1026199 9mtq:2t (2.55) BS02 MG N/A GO:0003723 ... P80380 40536958
    1026200 9mtq:2w (2.55) BS01 rna N/A GO:0003747 ... P96077 40536958

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).