SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1027601 9mwx:A (1.839) BS04 ZN N/A N/A P29474 N/A
    1027602 9mwx:A (1.839) BS05 H4B N/A N/A P29474 N/A
    1027603 9mwx:B (1.839) BS01 ZN N/A N/A P29474 N/A
    1027604 9mwx:B (1.839) BS02 HEM N/A N/A P29474 N/A
    1027605 9mwx:B (1.839) BS03 H4B N/A N/A P29474 N/A
    1027606 9mwx:B (1.839) BS04 A1BT5 N/A N/A P29474 N/A
    1027607 9mwx:C (1.839) BS01 HEM N/A N/A P29474 N/A
    1027608 9mwx:C (1.839) BS02 H4B N/A N/A P29474 N/A
    1027609 9mwx:C (1.839) BS03 A1BT5 N/A N/A P29474 N/A
    1027610 9mwx:C (1.839) BS04 ZN N/A N/A P29474 N/A
    1027611 9mwx:C (1.839) BS05 H4B N/A N/A P29474 N/A
    1027612 9mwx:D (1.839) BS01 H4B N/A N/A P29474 N/A
    1027613 9mwx:D (1.839) BS02 ZN N/A N/A P29474 N/A
    1027614 9mwx:D (1.839) BS03 HEM N/A N/A P29474 N/A
    1027615 9mwx:D (1.839) BS04 H4B N/A N/A P29474 N/A
    1027616 9mwx:D (1.839) BS05 A1BT5 N/A N/A P29474 N/A
    1027617 9mwy:A (3.28) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027618 9mwy:A (3.28) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027619 9mwy:C (3.28) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027620 9mwy:C (3.28) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027621 9mwy:D (3.28) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027622 9mwy:D (3.28) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027623 9mwy:L (3.28) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027624 9mwy:L (3.28) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027625 9mx0:C (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027626 9mx0:E (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027627 9mx0:G (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027628 9mx0:K (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027629 9mx0:N (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027630 9mx0:Q (3.35) BS01 PNS N/A GO:0005886 ... A0A1Y0CC73 40802754
    1027631 9mx0:S (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027632 9mx0:T (3.35) BS01 PNS N/A GO:0000035 ... A0A1Y0C2R4 40802754
    1027633 9mx2:A (3.9) BS01 SGV N/A GO:0004672 ... P34947 N/A
    1027634 9mx3:A (3.0) BS01 rna N/A GO:0003676 ... N/A 40434637
    1027635 9mx3:A (3.0) BS02 rna N/A GO:0003676 ... N/A 40434637
    1027636 9mx3:A (3.0) BS03 ADP N/A GO:0003676 ... N/A 40434637
    1027637 9mx5:A (3.1) BS01 rna N/A GO:0003676 ... N/A 40434637
    1027638 9mx5:A (3.1) BS02 rna N/A GO:0003676 ... N/A 40434637
    1027639 9mx5:A (3.1) BS03 ADP N/A GO:0003676 ... N/A 40434637
    1027640 9mx8:A (3.15) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027641 9mx8:A (3.15) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027642 9mx8:C (3.15) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027643 9mx8:C (3.15) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027644 9mx8:D (3.15) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027645 9mx8:D (3.15) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027646 9mx9:A (2.55) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027647 9mx9:A (2.55) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027648 9mx9:D (2.55) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027649 9mx9:D (2.55) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027650 9mxa:A (2.59) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027651 9mxa:A (2.59) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027652 9mxa:D (2.59) BS01 dna N/A GO:0003700 ... Q01543 40131773
    1027653 9mxa:D (2.59) BS02 dna N/A GO:0003700 ... Q01543 40131773
    1027654 9mxb:A (2.37) BS01 A1BTU N/A GO:0003676 ... P03366 40904837
    1027655 9mxc:A (2.1) BS01 peptide N/A N/A A0A097HUV1 40132641
    1027656 9mxc:C (2.1) BS01 peptide N/A GO:0005198 ... A0A1B3ILI7 40132641
    1027657 9mxd:A (1.17) BS01 peptide N/A GO:0000922 ... P0DP23 N/A
    1027658 9mxd:A (1.17) BS02 CA N/A GO:0000922 ... P0DP23 N/A
    1027659 9mxd:A (1.17) BS03 CA N/A GO:0000922 ... P0DP23 N/A
    1027660 9mxd:A (1.17) BS04 CA N/A GO:0000922 ... P0DP23 N/A
    1027661 9mxd:A (1.17) BS05 CA N/A GO:0000922 ... P0DP23 N/A
    1027662 9mxh:A (3.07) BS01 NAD N/A GO:0005515 ... Q14764 38979142
    1027663 9mxh:B (3.07) BS01 NAD N/A GO:0005515 ... Q14764 38979142
    1027664 9mxj:A (3.49) BS01 APR N/A GO:0005515 ... Q14764 40691181
    1027665 9mxj:B (3.49) BS01 APR N/A GO:0005515 ... Q14764 40691181
    1027666 9mxl:B (2.1) BS01 A1BUJ N/A GO:0005254 ... P13569 40750590
    1027667 9mxl:B (2.1) BS02 MG N/A GO:0005254 ... P13569 40750590
    1027668 9mxl:B (2.1) BS03 MG N/A GO:0005254 ... P13569 40750590
    1027669 9mxl:B (2.1) BS04 ATP N/A GO:0005254 ... P13569 40750590
    1027670 9mxl:B (2.1) BS05 ATP N/A GO:0005254 ... P13569 40750590
    1027671 9mxr:A (3.05) BS01 A1BTU N/A GO:0003676 ... P03366 40904837
    1027672 9mxs:A (3.09) BS01 A1BTU N/A GO:0003676 ... P03366 40904837
    1027673 9mxt:A (3.43) BS01 A1BTU N/A GO:0003676 ... P03366 40904837
    1027674 9mxt:A (3.43) BS02 A1BTU N/A GO:0003676 ... P03366 40904837
    1027675 9mxt:C (3.43) BS01 A1BTU N/A GO:0003676 ... P03366 40904837
    1027676 9mxv:A (2.68) BS01 ADP N/A GO:0005515 ... Q14764 38979142
    1027677 9mxv:B (2.68) BS01 ADP N/A GO:0005515 ... Q14764 38979142
    1027678 9my5:A (2.39) BS01 A1BUB N/A GO:0008668 ... A0A505MWF2 40096888
    1027679 9my5:A (2.39) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027680 9my5:B (2.39) BS01 A1BUB N/A GO:0008668 ... A0A505MWF2 40096888
    1027681 9my5:B (2.39) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027682 9my5:B (2.39) BS03 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027683 9my6:A (2.07) BS01 OOI N/A GO:0008668 ... A0A505MWF2 40096888
    1027684 9my6:A (2.07) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027685 9my6:A (2.07) BS03 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027686 9my6:B (2.07) BS01 OOI N/A GO:0008668 ... A0A505MWF2 40096888
    1027687 9my6:B (2.07) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027688 9my6:B (2.07) BS03 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027689 9my7:A (2.53) BS01 BHA N/A GO:0008668 ... A0A505MWF2 40096888
    1027690 9my7:A (2.53) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027691 9my7:B (2.53) BS01 BHA N/A GO:0008668 ... A0A505MWF2 40096888
    1027692 9my7:B (2.53) BS02 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027693 9my7:B (2.53) BS03 CA N/A GO:0008668 ... A0A505MWF2 40096888
    1027694 9mye:A (2.22) BS01 dna N/A N/A P56689 41501182
    1027695 9mye:A (2.22) BS02 dna N/A N/A P56689 41501182
    1027696 9myf:A (2.45) BS01 MG N/A GO:0004470 ... P23368 41088330
    1027697 9myf:A (2.45) BS02 A1AE5 N/A GO:0004470 ... P23368 41088330
    1027698 9myf:A (2.45) BS03 NAD N/A GO:0004470 ... P23368 41088330
    1027699 9myf:A (2.45) BS04 NAD N/A GO:0004470 ... P23368 41088330
    1027700 9myf:B (2.45) BS01 MG N/A GO:0004470 ... P23368 41088330
    1027701 9myf:B (2.45) BS02 A1AE5 N/A GO:0004470 ... P23368 41088330
    1027702 9myf:B (2.45) BS03 NAD N/A GO:0004470 ... P23368 41088330
    1027703 9myf:B (2.45) BS04 NAD N/A GO:0004470 ... P23368 41088330
    1027704 9myj:B (3.57) BS01 MAN N/A GO:0120147 ... Q7MXB7 40830366
    1027705 9myj:B (3.57) BS02 GCU N/A GO:0120147 ... Q7MXB7 40830366
    1027706 9myj:B (3.57) BS03 CA N/A GO:0120147 ... Q7MXB7 40830366
    1027707 9myl:C (3.177) BS01 PRO N/A GO:0005102 ... Q9D9J7 40042902
    1027708 9myl:D (3.177) BS01 PRO N/A GO:0005102 ... Q9D9J7 40042902
    1027709 9myp:A (1.84) BS01 ZN N/A N/A A0A913ZKG6 40829932
    1027710 9myp:A (1.84) BS02 ZN N/A N/A A0A913ZKG6 40829932
    1027711 9myp:B (1.84) BS01 ZN N/A N/A A0A913ZKG6 40829932
    1027712 9myp:B (1.84) BS02 ZN N/A N/A A0A913ZKG6 40829932
    1027713 9myp:C (1.84) BS01 ZN N/A N/A A0A913ZKG6 40829932
    1027714 9myp:C (1.84) BS02 ZN N/A N/A A0A913ZKG6 40829932
    1027715 9myr:B (1.95) BS01 ZN N/A N/A B7X4S7 40609792
    1027716 9myr:D (1.95) BS01 ZN N/A N/A B7X4S7 40609792
    1027717 9myu:A (2.15) BS01 HEM N/A N/A P29475 N/A
    1027718 9myu:A (2.15) BS02 H4B N/A N/A P29475 N/A
    1027719 9myu:A (2.15) BS03 A1BUD N/A N/A P29475 N/A
    1027720 9myu:A (2.15) BS04 ZN N/A N/A P29475 N/A
    1027721 9myu:A (2.15) BS05 H4B N/A N/A P29475 N/A
    1027722 9myu:B (2.15) BS01 H4B N/A N/A P29475 N/A
    1027723 9myu:B (2.15) BS02 ZN N/A N/A P29475 N/A
    1027724 9myu:B (2.15) BS03 HEM N/A N/A P29475 N/A
    1027725 9myu:B (2.15) BS04 H4B N/A N/A P29475 N/A
    1027726 9myu:B (2.15) BS05 A1BUD N/A N/A P29475 N/A
    1027727 9myu:C (2.15) BS01 HEM N/A N/A P29475 N/A
    1027728 9myu:C (2.15) BS02 H4B N/A N/A P29475 N/A
    1027729 9myu:C (2.15) BS03 A1BUD N/A N/A P29475 N/A
    1027730 9myu:C (2.15) BS04 ZN N/A N/A P29475 N/A
    1027731 9myu:C (2.15) BS05 H4B N/A N/A P29475 N/A
    1027732 9myu:D (2.15) BS01 H4B N/A N/A P29475 N/A
    1027733 9myu:D (2.15) BS02 ZN N/A N/A P29475 N/A
    1027734 9myu:D (2.15) BS03 HEM N/A N/A P29475 N/A
    1027735 9myu:D (2.15) BS04 H4B N/A N/A P29475 N/A
    1027736 9myu:D (2.15) BS05 A1BUD N/A N/A P29475 N/A
    1027737 9myv:A (2.149) BS01 HEM N/A N/A P29475 N/A
    1027738 9myv:A (2.149) BS02 H4B N/A N/A P29475 N/A
    1027739 9myv:A (2.149) BS03 A1BUF N/A N/A P29475 N/A
    1027740 9myv:A (2.149) BS04 ZN N/A N/A P29475 N/A
    1027741 9myv:A (2.149) BS05 H4B N/A N/A P29475 N/A
    1027742 9myv:B (2.149) BS01 H4B N/A N/A P29475 N/A
    1027743 9myv:B (2.149) BS02 ZN N/A N/A P29475 N/A
    1027744 9myv:B (2.149) BS03 HEM N/A N/A P29475 N/A
    1027745 9myv:B (2.149) BS04 H4B N/A N/A P29475 N/A
    1027746 9myv:B (2.149) BS05 A1BUF N/A N/A P29475 N/A
    1027747 9myv:C (2.149) BS01 HEM N/A N/A P29475 N/A
    1027748 9myv:C (2.149) BS02 H4B N/A N/A P29475 N/A
    1027749 9myv:C (2.149) BS03 A1BUF N/A N/A P29475 N/A
    1027750 9myv:C (2.149) BS04 ZN N/A N/A P29475 N/A
    1027751 9myv:C (2.149) BS05 H4B N/A N/A P29475 N/A
    1027752 9myv:D (2.149) BS01 H4B N/A N/A P29475 N/A
    1027753 9myv:D (2.149) BS02 ZN N/A N/A P29475 N/A
    1027754 9myv:D (2.149) BS03 HEM N/A N/A P29475 N/A
    1027755 9myv:D (2.149) BS04 H4B N/A N/A P29475 N/A
    1027756 9myv:D (2.149) BS05 A1BUF N/A N/A P29475 N/A
    1027757 9myw:A (2.305) BS01 HEM N/A N/A P29475 N/A
    1027758 9myw:A (2.305) BS02 H4B N/A N/A P29475 N/A
    1027759 9myw:A (2.305) BS03 A1BUH N/A N/A P29475 N/A
    1027760 9myw:A (2.305) BS04 ZN N/A N/A P29475 N/A
    1027761 9myw:A (2.305) BS05 H4B N/A N/A P29475 N/A
    1027762 9myw:B (2.305) BS01 H4B N/A N/A P29475 N/A
    1027763 9myw:B (2.305) BS02 ZN N/A N/A P29475 N/A
    1027764 9myw:B (2.305) BS03 HEM N/A N/A P29475 N/A
    1027765 9myw:B (2.305) BS04 H4B N/A N/A P29475 N/A
    1027766 9myw:B (2.305) BS05 A1BUH N/A N/A P29475 N/A
    1027767 9myw:C (2.305) BS01 HEM N/A N/A P29475 N/A
    1027768 9myw:C (2.305) BS02 H4B N/A N/A P29475 N/A
    1027769 9myw:C (2.305) BS03 A1BUH N/A N/A P29475 N/A
    1027770 9myw:C (2.305) BS04 ZN N/A N/A P29475 N/A
    1027771 9myw:C (2.305) BS05 H4B N/A N/A P29475 N/A
    1027772 9myw:D (2.305) BS01 H4B N/A N/A P29475 N/A
    1027773 9myw:D (2.305) BS02 ZN N/A N/A P29475 N/A
    1027774 9myw:D (2.305) BS03 HEM N/A N/A P29475 N/A
    1027775 9myw:D (2.305) BS04 H4B N/A N/A P29475 N/A
    1027776 9myw:D (2.305) BS05 A1BUH N/A N/A P29475 N/A
    1027777 9myx:A (1.821) BS01 HEM N/A N/A P29476 N/A
    1027778 9myx:A (1.821) BS02 H4B N/A N/A P29476 N/A
    1027779 9myx:A (1.821) BS03 A1BUD N/A N/A P29476 N/A
    1027780 9myx:A (1.821) BS04 ZN N/A N/A P29476 N/A
    1027781 9myy:A (1.83) BS01 HEM N/A N/A P29476 N/A
    1027782 9myy:A (1.83) BS02 H4B N/A N/A P29476 N/A
    1027783 9myy:A (1.83) BS03 ZN N/A N/A P29476 N/A
    1027784 9myy:A (1.83) BS04 A1BUF N/A N/A P29476 N/A
    1027785 9myz:A (1.92) BS01 HEM N/A N/A P29476 N/A
    1027786 9myz:A (1.92) BS02 H4B N/A N/A P29476 N/A
    1027787 9myz:A (1.92) BS03 ZN N/A N/A P29476 N/A
    1027788 9myz:A (1.92) BS04 A1BUH N/A N/A P29476 N/A
    1027789 9mz0:A (1.94) BS01 HEM N/A N/A P29476 N/A
    1027790 9mz0:A (1.94) BS02 H4B N/A N/A P29476 N/A
    1027791 9mz0:A (1.94) BS03 A1BU3 N/A N/A P29476 N/A
    1027792 9mz0:A (1.94) BS04 ZN N/A N/A P29476 N/A
    1027793 9mz1:A (2.05) BS01 HEM N/A N/A P29474 N/A
    1027794 9mz1:A (2.05) BS02 H4B N/A N/A P29474 N/A
    1027795 9mz1:A (2.05) BS03 A1BUD N/A N/A P29474 N/A
    1027796 9mz1:A (2.05) BS04 ZN N/A N/A P29474 N/A
    1027797 9mz1:A (2.05) BS05 H4B N/A N/A P29474 N/A
    1027798 9mz1:B (2.05) BS01 H4B N/A N/A P29474 N/A
    1027799 9mz1:B (2.05) BS02 ZN N/A N/A P29474 N/A
    1027800 9mz1:B (2.05) BS03 HEM N/A N/A P29474 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).