SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1027801 9mz1:B (2.05) BS04 H4B N/A N/A P29474 N/A
    1027802 9mz1:B (2.05) BS05 A1BUD N/A N/A P29474 N/A
    1027803 9mz1:C (2.05) BS01 HEM N/A N/A P29474 N/A
    1027804 9mz1:C (2.05) BS02 H4B N/A N/A P29474 N/A
    1027805 9mz1:C (2.05) BS03 A1BUD N/A N/A P29474 N/A
    1027806 9mz1:C (2.05) BS04 ZN N/A N/A P29474 N/A
    1027807 9mz1:C (2.05) BS05 H4B N/A N/A P29474 N/A
    1027808 9mz1:D (2.05) BS01 H4B N/A N/A P29474 N/A
    1027809 9mz1:D (2.05) BS02 ZN N/A N/A P29474 N/A
    1027810 9mz1:D (2.05) BS03 HEM N/A N/A P29474 N/A
    1027811 9mz1:D (2.05) BS04 H4B N/A N/A P29474 N/A
    1027812 9mz1:D (2.05) BS05 A1BUD N/A N/A P29474 N/A
    1027813 9mz2:A (1.99) BS01 HEM N/A N/A P29474 N/A
    1027814 9mz2:A (1.99) BS02 H4B N/A N/A P29474 N/A
    1027815 9mz2:A (1.99) BS03 A1BUF N/A N/A P29474 N/A
    1027816 9mz2:A (1.99) BS04 ZN N/A N/A P29474 N/A
    1027817 9mz2:A (1.99) BS05 H4B N/A N/A P29474 N/A
    1027818 9mz2:B (1.99) BS01 H4B N/A N/A P29474 N/A
    1027819 9mz2:B (1.99) BS02 ZN N/A N/A P29474 N/A
    1027820 9mz2:B (1.99) BS03 HEM N/A N/A P29474 N/A
    1027821 9mz2:B (1.99) BS04 H4B N/A N/A P29474 N/A
    1027822 9mz2:B (1.99) BS05 A1BUF N/A N/A P29474 N/A
    1027823 9mz2:C (1.99) BS01 HEM N/A N/A P29474 N/A
    1027824 9mz2:C (1.99) BS02 H4B N/A N/A P29474 N/A
    1027825 9mz2:C (1.99) BS03 A1BUF N/A N/A P29474 N/A
    1027826 9mz2:C (1.99) BS04 ZN N/A N/A P29474 N/A
    1027827 9mz2:C (1.99) BS05 H4B N/A N/A P29474 N/A
    1027828 9mz2:D (1.99) BS01 H4B N/A N/A P29474 N/A
    1027829 9mz2:D (1.99) BS02 ZN N/A N/A P29474 N/A
    1027830 9mz2:D (1.99) BS03 HEM N/A N/A P29474 N/A
    1027831 9mz2:D (1.99) BS04 H4B N/A N/A P29474 N/A
    1027832 9mz2:D (1.99) BS05 A1BUF N/A N/A P29474 N/A
    1027833 9mz3:A (1.95) BS01 HEM N/A N/A P29474 N/A
    1027834 9mz3:A (1.95) BS02 H4B N/A N/A P29474 N/A
    1027835 9mz3:A (1.95) BS03 A1BUH N/A N/A P29474 N/A
    1027836 9mz3:A (1.95) BS04 ZN N/A N/A P29474 N/A
    1027837 9mz3:A (1.95) BS05 H4B N/A N/A P29474 N/A
    1027838 9mz3:B (1.95) BS01 H4B N/A N/A P29474 N/A
    1027839 9mz3:B (1.95) BS02 ZN N/A N/A P29474 N/A
    1027840 9mz3:B (1.95) BS03 HEM N/A N/A P29474 N/A
    1027841 9mz3:B (1.95) BS04 H4B N/A N/A P29474 N/A
    1027842 9mz3:B (1.95) BS05 A1BUH N/A N/A P29474 N/A
    1027843 9mz3:C (1.95) BS01 HEM N/A N/A P29474 N/A
    1027844 9mz3:C (1.95) BS02 H4B N/A N/A P29474 N/A
    1027845 9mz3:C (1.95) BS03 A1BUH N/A N/A P29474 N/A
    1027846 9mz3:C (1.95) BS04 ZN N/A N/A P29474 N/A
    1027847 9mz3:C (1.95) BS05 H4B N/A N/A P29474 N/A
    1027848 9mz3:D (1.95) BS01 H4B N/A N/A P29474 N/A
    1027849 9mz3:D (1.95) BS02 ZN N/A N/A P29474 N/A
    1027850 9mz3:D (1.95) BS03 HEM N/A N/A P29474 N/A
    1027851 9mz3:D (1.95) BS04 H4B N/A N/A P29474 N/A
    1027852 9mz3:D (1.95) BS05 A1BUH N/A N/A P29474 N/A
    1027853 9mz4:A (1.94) BS01 HEM N/A N/A P29474 N/A
    1027854 9mz4:A (1.94) BS02 H4B N/A N/A P29474 N/A
    1027855 9mz4:A (1.94) BS03 A1BU3 N/A N/A P29474 N/A
    1027856 9mz4:A (1.94) BS04 ZN N/A N/A P29474 N/A
    1027857 9mz4:A (1.94) BS05 H4B N/A N/A P29474 N/A
    1027858 9mz4:B (1.94) BS01 H4B N/A N/A P29474 N/A
    1027859 9mz4:B (1.94) BS02 ZN N/A N/A P29474 N/A
    1027860 9mz4:B (1.94) BS03 HEM N/A N/A P29474 N/A
    1027861 9mz4:B (1.94) BS04 H4B N/A N/A P29474 N/A
    1027862 9mz4:B (1.94) BS05 A1BU3 N/A N/A P29474 N/A
    1027863 9mz4:C (1.94) BS01 HEM N/A N/A P29474 N/A
    1027864 9mz4:C (1.94) BS02 H4B N/A N/A P29474 N/A
    1027865 9mz4:C (1.94) BS03 A1BU3 N/A N/A P29474 N/A
    1027866 9mz4:C (1.94) BS04 ZN N/A N/A P29474 N/A
    1027867 9mz4:C (1.94) BS05 H4B N/A N/A P29474 N/A
    1027868 9mz4:D (1.94) BS01 H4B N/A N/A P29474 N/A
    1027869 9mz4:D (1.94) BS02 ZN N/A N/A P29474 N/A
    1027870 9mz4:D (1.94) BS03 HEM N/A N/A P29474 N/A
    1027871 9mz4:D (1.94) BS04 H4B N/A N/A P29474 N/A
    1027872 9mz4:D (1.94) BS05 A1BU3 N/A N/A P29474 N/A
    1027873 9mz6:A (2.5) BS01 peptide N/A N/A N/A N/A
    1027874 9mz6:B (2.5) BS01 peptide N/A N/A N/A N/A
    1027875 9mz7:A (1.94) BS01 peptide N/A N/A N/A N/A
    1027876 9mz7:B (1.94) BS01 peptide N/A N/A N/A N/A
    1027877 9mz8:A (1.74) BS01 peptide N/A N/A N/A N/A
    1027878 9mz8:B (1.74) BS01 peptide N/A N/A N/A N/A
    1027879 9mza:A (2.1) BS01 A1BUC N/A N/A P41182 40166243
    1027880 9mza:A (2.1) BS02 A1BUC N/A N/A P41182 40166243
    1027881 9mza:B (2.1) BS01 A1BUC N/A N/A Q09472 40166243
    1027882 9mza:C (2.1) BS01 A1BUC N/A N/A P41182 40166243
    1027883 9mza:C (2.1) BS02 A1BUC N/A N/A P41182 40166243
    1027884 9mza:D (2.1) BS01 A1BUC N/A N/A Q09472 40166243
    1027885 9mzm:A (3.86) BS01 GLU N/A N/A P42260 N/A
    1027886 9mzm:B (3.86) BS01 GLU N/A N/A P42260 N/A
    1027887 9mzm:C (3.86) BS01 GLU N/A N/A P42260 N/A
    1027888 9mzm:D (3.86) BS01 GLU N/A N/A P42260 N/A
    1027889 9mzp:A (3.8) BS01 GLU N/A N/A P42260 N/A
    1027890 9mzp:B (3.8) BS01 GLU N/A N/A P42260 N/A
    1027891 9mzp:C (3.8) BS01 GLU N/A N/A P42260 N/A
    1027892 9mzp:D (3.8) BS01 GLU N/A N/A P42260 N/A
    1027893 9mzu:A (2.4) BS01 MAN N/A N/A Q7MXB7 N/A
    1027894 9mzu:A (2.4) BS02 GCU N/A N/A Q7MXB7 N/A
    1027895 9mzu:A (2.4) BS03 GLC N/A N/A Q7MXB7 N/A
    1027896 9mzu:A (2.4) BS04 GCU N/A N/A Q7MXB7 N/A
    1027897 9mzu:A (2.4) BS05 CA N/A N/A Q7MXB7 N/A
    1027898 9mzu:C (2.4) BS01 MAN N/A N/A Q7MXB7 N/A
    1027899 9mzu:C (2.4) BS02 GCU N/A N/A Q7MXB7 N/A
    1027900 9mzu:C (2.4) BS03 GLC N/A N/A Q7MXB7 N/A
    1027901 9mzu:C (2.4) BS04 GCU N/A N/A Q7MXB7 N/A
    1027902 9mzu:C (2.4) BS05 CA N/A N/A Q7MXB7 N/A
    1027903 9mzu:D (2.4) BS01 MAN N/A N/A Q7MXB4 N/A
    1027904 9mzu:E (2.4) BS01 MAN N/A N/A Q7MXB7 N/A
    1027905 9mzu:E (2.4) BS02 GCU N/A N/A Q7MXB7 N/A
    1027906 9mzu:E (2.4) BS03 GCU N/A N/A Q7MXB7 N/A
    1027907 9mzu:E (2.4) BS04 CA N/A N/A Q7MXB7 N/A
    1027908 9mzx:A (2.53) BS01 A1BU4 N/A GO:0004672 ... Q13546 40365380
    1027909 9mzx:B (2.53) BS01 A1BU4 N/A GO:0004672 ... Q13546 40365380
    1027910 9mzy:A (2.32) BS01 A1BU6 N/A GO:0004672 ... Q13546 40365380
    1027911 9mzy:B (2.32) BS01 A1BU6 N/A GO:0004672 ... Q13546 40365380
    1027912 9mzz:A (2.68) BS01 A1BU5 N/A GO:0004672 ... Q13546 40365380
    1027913 9mzz:B (2.68) BS01 A1BU5 N/A GO:0004672 ... Q13546 40365380
    1027914 9n03:A (1.8) BS01 0CZ N/A N/A D6N7U3 N/A
    1027915 9n03:B (1.8) BS01 0CZ N/A N/A D6N7U3 N/A
    1027916 9n03:B (1.8) BS02 0CZ N/A N/A D6N7U3 N/A
    1027917 9n06:A (1.9) BS01 2OH N/A N/A D6N7U3 N/A
    1027918 9n06:B (1.9) BS01 2OH N/A N/A D6N7U3 N/A
    1027919 9n07:A (3.48) BS01 dna N/A GO:0000716 ... P30958 N/A
    1027920 9n07:A (3.48) BS02 dna N/A GO:0000716 ... P30958 N/A
    1027921 9n07:A (3.48) BS03 ADP N/A GO:0000716 ... P30958 N/A
    1027922 9n07:I (3.48) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    1027923 9n07:I (3.48) BS02 rna N/A GO:0000345 ... P0A8V2 N/A
    1027924 9n07:I (3.48) BS03 dna N/A GO:0000345 ... P0A8V2 N/A
    1027925 9n07:J (3.48) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    1027926 9n07:J (3.48) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    1027927 9n07:J (3.48) BS03 MG N/A GO:0000287 ... P0A8T7 N/A
    1027928 9n07:J (3.48) BS04 ZN N/A GO:0000287 ... P0A8T7 N/A
    1027929 9n07:J (3.48) BS05 ZN N/A GO:0000287 ... P0A8T7 N/A
    1027930 9n09:R (2.57) BS01 5XI N/A GO:0005515 ... P08173 N/A
    1027931 9n0a:A (2.5) BS01 A1BUG N/A N/A D6N7U3 N/A
    1027932 9n0a:B (2.5) BS01 A1BUG N/A N/A D6N7U3 N/A
    1027933 9n0c:A (1.47) BS01 A1BVI N/A N/A D6N7U3 N/A
    1027934 9n0c:B (1.47) BS01 A1BVI N/A N/A D6N7U3 N/A
    1027935 9n0j:A (1.54) BS01 3NY N/A N/A N/A N/A
    1027936 9n0j:A (1.54) BS02 3NY N/A N/A N/A N/A
    1027937 9n0j:A (1.54) BS03 3NY N/A N/A N/A N/A
    1027938 9n0o:A (2.8) BS01 PLP N/A GO:0008483 ... I6X4K0 40543586
    1027939 9n0o:A (2.8) BS02 PLP N/A GO:0008483 ... I6X4K0 40543586
    1027940 9n0o:B (2.8) BS01 PLP N/A GO:0008483 ... I6X4K0 40543586
    1027941 9n0o:B (2.8) BS02 PLP N/A GO:0008483 ... I6X4K0 40543586
    1027942 9n0q:A (3.09) BS01 ZN N/A GO:0000166 ... P52639 40996804
    1027943 9n0q:A (3.09) BS02 ZN N/A GO:0000166 ... P52639 40996804
    1027944 9n0r:A (2.71) BS01 ZN N/A GO:0000166 ... P52639 40996804
    1027945 9n0r:A (2.71) BS02 ZN N/A GO:0000166 ... P52639 40996804
    1027946 9n0t:A (3.37) BS01 ZN N/A GO:0000166 ... P52639 40996804
    1027947 9n0t:A (3.37) BS02 ZN N/A GO:0000166 ... P52639 40996804
    1027948 9n0u:A (3.46) BS01 ZN N/A GO:0000166 ... P52639 40996804
    1027949 9n0v:A (2.98) BS01 A1BUL N/A GO:0016032 ... P12497 41089487
    1027950 9n0v:B (2.98) BS01 A1BUL N/A GO:0016032 ... P12497 41089487
    1027951 9n0v:B (2.98) BS02 A1BUL N/A GO:0016032 ... P12497 41089487
    1027952 9n0v:C (2.98) BS01 A1BUL N/A GO:0016032 ... P12497 41089487
    1027953 9n0v:D (2.98) BS01 A1BUL N/A GO:0016032 ... P12497 41089487
    1027954 9n0v:D (2.98) BS02 A1BUL N/A GO:0016032 ... P12497 41089487
    1027955 9n0x:A (3.3) BS01 P5S N/A GO:0003882 ... Q9BVG9 40372437
    1027956 9n0x:A (3.3) BS02 P5S N/A GO:0003882 ... Q9BVG9 40372437
    1027957 9n0x:A (3.3) BS03 CA N/A GO:0003882 ... Q9BVG9 40372437
    1027958 9n0x:A (3.3) BS04 RXY N/A GO:0003882 ... Q9BVG9 40372437
    1027959 9n0x:B (3.3) BS01 P5S N/A GO:0003882 ... Q9BVG9 40372437
    1027960 9n0x:B (3.3) BS02 P5S N/A GO:0003882 ... Q9BVG9 40372437
    1027961 9n0x:B (3.3) BS03 CA N/A GO:0003882 ... Q9BVG9 40372437
    1027962 9n0x:B (3.3) BS04 RXY N/A GO:0003882 ... Q9BVG9 40372437
    1027963 9n0y:B (3.71) BS01 peptide N/A GO:0000159 ... P63151 40414499
    1027964 9n11:A (4.29) BS01 dna N/A GO:0000716 ... A0A024L3Y3 N/A
    1027965 9n11:A (4.29) BS02 dna N/A GO:0000716 ... A0A024L3Y3 N/A
    1027966 9n11:I (4.29) BS01 rna N/A GO:0003677 ... C3SIA7 N/A
    1027967 9n11:I (4.29) BS02 dna N/A GO:0003677 ... C3SIA7 N/A
    1027968 9n11:I (4.29) BS03 dna N/A GO:0003677 ... C3SIA7 N/A
    1027969 9n11:J (4.29) BS01 rna N/A GO:0000287 ... A0A369F490 N/A
    1027970 9n11:J (4.29) BS02 dna N/A GO:0000287 ... A0A369F490 N/A
    1027971 9n11:J (4.29) BS03 dna N/A GO:0000287 ... A0A369F490 N/A
    1027972 9n11:J (4.29) BS04 MG N/A GO:0000287 ... A0A369F490 N/A
    1027973 9n11:J (4.29) BS05 ZN N/A GO:0000287 ... A0A369F490 N/A
    1027974 9n11:J (4.29) BS06 ZN N/A GO:0000287 ... A0A369F490 N/A
    1027975 9n14:A (3.08) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027976 9n14:B (3.08) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027977 9n14:C (3.08) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027978 9n15:A (3.2) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027979 9n18:A (3.02) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027980 9n18:B (3.02) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027981 9n18:C (3.02) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027982 9n19:A (3.02) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    1027983 9n1a:A (2.13) BS01 FE N/A N/A F8S6W0 40774922
    1027984 9n1a:A (2.13) BS02 FE N/A N/A F8S6W0 40774922
    1027985 9n1b:A (1.75) BS01 B12 N/A N/A N/A 41564129
    1027986 9n1b:A (1.75) BS02 SF4 N/A N/A N/A 41564129
    1027987 9n1b:A (1.75) BS03 MET N/A N/A N/A 41564129
    1027988 9n1b:A (1.75) BS04 A1BUN N/A N/A N/A 41564129
    1027989 9n1c:A (2.0) BS01 B12 N/A N/A N/A 41564129
    1027990 9n1c:A (2.0) BS02 SF4 N/A N/A N/A 41564129
    1027991 9n1c:A (2.0) BS03 MET N/A N/A N/A 41564129
    1027992 9n1c:A (2.0) BS04 A1BUP N/A N/A N/A 41564129
    1027993 9n1d:A (1.94) BS01 B12 N/A N/A N/A 41564129
    1027994 9n1d:A (1.94) BS02 SF4 N/A N/A N/A 41564129
    1027995 9n1d:A (1.94) BS03 MET N/A N/A N/A 41564129
    1027996 9n1e:A (2.0) BS01 FE N/A N/A F8S6W0 40774922
    1027997 9n1e:A (2.0) BS02 FE N/A N/A F8S6W0 40774922
    1027998 9n1f:A (2.1) BS01 ZN N/A GO:0008270 ... Q6ZSG1 40451499
    1027999 9n1f:A (2.1) BS02 ZN N/A GO:0008270 ... Q6ZSG1 40451499
    1028000 9n1g:A (2.62) BS01 Y01 N/A N/A A0A5F9C9I2 41136608

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).