SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1028201 9n1n:C (3.2) BS01 Y01 N/A N/A A0A5F9C9I2 41136608
    1028202 9n1n:C (3.2) BS02 Y01 N/A N/A A0A5F9C9I2 41136608
    1028203 9n1n:C (3.2) BS03 Y01 N/A N/A A0A5F9C9I2 41136608
    1028204 9n1n:C (3.2) BS04 A1AIB N/A N/A A0A5F9C9I2 41136608
    1028205 9n1n:D (3.2) BS01 Y01 N/A N/A A0A5F9C9I2 41136608
    1028206 9n1n:D (3.2) BS02 Y01 N/A N/A A0A5F9C9I2 41136608
    1028207 9n1n:D (3.2) BS03 Y01 N/A N/A A0A5F9C9I2 41136608
    1028208 9n1n:D (3.2) BS04 A1AIB N/A N/A A0A5F9C9I2 41136608
    1028209 9n1r:A (2.8) BS01 ZN N/A N/A P98170 41554911
    1028210 9n1r:A (2.8) BS02 A1BUO N/A N/A P98170 41554911
    1028211 9n1r:B (2.8) BS01 ZN N/A N/A P98170 41554911
    1028212 9n1r:B (2.8) BS02 A1BUO N/A N/A P98170 41554911
    1028213 9n1t:A (1.43) BS01 A1BU8 N/A GO:0004672 ... P53355 N/A
    1028214 9n1u:A (1.55) BS01 DPP N/A N/A A0A1I9RH13 40313847
    1028215 9n1v:A (1.3) BS01 A1BVA N/A N/A A0A1I9RH13 40313847
    1028216 9n1x:A (2.14) BS01 FE2 N/A N/A F8S6W0 40774922
    1028217 9n1x:A (2.14) BS02 FE2 N/A N/A F8S6W0 40774922
    1028218 9n21:A (2.74) BS01 ZN N/A N/A P98170 41554911
    1028219 9n21:A (2.74) BS02 A1BVB N/A N/A P98170 41554911
    1028220 9n22:A (3.91) BS01 ADP N/A GO:0000045 ... P18759 40604310
    1028221 9n22:A (3.91) BS02 ATP N/A GO:0000045 ... P18759 40604310
    1028222 9n22:A (3.91) BS03 ATP N/A GO:0000045 ... P18759 40604310
    1028223 9n22:B (3.91) BS01 ATP N/A GO:0000045 ... P18759 40604310
    1028224 9n22:B (3.91) BS02 ATP N/A GO:0000045 ... P18759 40604310
    1028225 9n22:B (3.91) BS03 ATP N/A GO:0000045 ... P18759 40604310
    1028226 9n22:C (3.91) BS01 ATP N/A GO:0000045 ... P18759 40604310
    1028227 9n22:C (3.91) BS02 ATP N/A GO:0000045 ... P18759 40604310
    1028228 9n22:D (3.91) BS01 ATP N/A GO:0000045 ... P18759 40604310
    1028229 9n22:D (3.91) BS02 ATP N/A GO:0000045 ... P18759 40604310
    1028230 9n22:E (3.91) BS01 ADP N/A GO:0000045 ... P18759 40604310
    1028231 9n22:E (3.91) BS02 ATP N/A GO:0000045 ... P18759 40604310
    1028232 9n22:F (3.91) BS01 ATP N/A GO:0000045 ... P18759 40604310
    1028233 9n23:A (1.8) BS01 ZN N/A N/A Q13490 41554911
    1028234 9n23:A (1.8) BS02 A1BVC N/A N/A Q13490 41554911
    1028235 9n23:B (1.8) BS01 ZN N/A N/A Q13490 41554911
    1028236 9n23:B (1.8) BS02 A1BVC N/A N/A Q13490 41554911
    1028237 9n24:A (2.3) BS01 H3W N/A N/A D6N7U3 N/A
    1028238 9n24:A (2.3) BS02 H3W N/A N/A D6N7U3 N/A
    1028239 9n24:B (2.3) BS01 H3W N/A N/A D6N7U3 N/A
    1028240 9n24:B (2.3) BS02 H3W N/A N/A D6N7U3 N/A
    1028241 9n25:A (2.15) BS01 BPZ N/A N/A D6N7U3 N/A
    1028242 9n25:B (2.15) BS01 BPZ N/A N/A D6N7U3 N/A
    1028243 9n26:A (1.963) BS01 dna N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028244 9n26:A (1.963) BS02 dna N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028245 9n26:A (1.963) BS03 MN N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028246 9n26:A (1.963) BS04 A1BU9 N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028247 9n26:B (1.963) BS01 dna N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028248 9n26:B (1.963) BS02 dna N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028249 9n26:B (1.963) BS03 MN N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028250 9n26:B (1.963) BS04 A1BU9 N/A GO:0003677 ... P0A0K8
    P20831
    40248158
    1028251 9n27:A (2.15) BS01 A1BVK N/A N/A D6N7U3 N/A
    1028252 9n27:A (2.15) BS02 A1BVK N/A N/A D6N7U3 N/A
    1028253 9n27:A (2.15) BS03 A1BWR N/A N/A D6N7U3 N/A
    1028254 9n27:A (2.15) BS04 A1BWR N/A N/A D6N7U3 N/A
    1028255 9n27:B (2.15) BS01 A1BVK N/A N/A D6N7U3 N/A
    1028256 9n27:B (2.15) BS02 A1BVK N/A N/A D6N7U3 N/A
    1028257 9n27:B (2.15) BS03 A1BWR N/A N/A D6N7U3 N/A
    1028258 9n27:B (2.15) BS04 A1BWR N/A N/A D6N7U3 N/A
    1028259 9n28:A (2.1) BS01 peptide N/A N/A D6N7U3 N/A
    1028260 9n28:A (2.1) BS02 EST N/A N/A D6N7U3 N/A
    1028261 9n2a:A (2.14) BS01 FE2 N/A N/A F8S6W0 40774922
    1028262 9n2a:A (2.14) BS02 FE2 N/A N/A F8S6W0 40774922
    1028263 9n2a:A (2.14) BS03 LYS N/A N/A F8S6W0 40774922
    1028264 9n2b:LB (2.2) BS01 rna N/A GO:0000027 ... P60422 40045785
    1028265 9n2b:LB (2.2) BS02 MG N/A GO:0000027 ... P60422 40045785
    1028266 9n2b:LC (2.2) BS01 rna N/A GO:0000027 ... P60438 40045785
    1028267 9n2b:LD (2.2) BS01 rna N/A GO:0001070 ... P60723 40045785
    1028268 9n2b:LD (2.2) BS02 MG N/A GO:0001070 ... P60723 40045785
    1028269 9n2b:LE (2.2) BS01 rna N/A GO:0000027 ... P62399 40045785
    1028270 9n2b:LE (2.2) BS02 rna N/A GO:0000027 ... P62399 40045785
    1028271 9n2b:LE (2.2) BS03 rna N/A GO:0000027 ... P62399 40045785
    1028272 9n2b:LF (2.2) BS01 rna N/A GO:0000027 ... P0AG55 40045785
    1028273 9n2b:LI (2.2) BS01 rna N/A GO:0002181 ... P0A7R1 40045785
    1028274 9n2b:LM (2.2) BS01 rna N/A GO:0002181 ... P0AA10 40045785
    1028275 9n2b:LN (2.2) BS01 rna N/A GO:0002181 ... P0ADY3 40045785
    1028276 9n2b:LN (2.2) BS02 rna N/A GO:0002181 ... P0ADY3 40045785
    1028277 9n2b:LO (2.2) BS01 rna N/A GO:0002181 ... P02413 40045785
    1028278 9n2b:LP (2.2) BS01 rna N/A GO:0000027 ... P0ADY7 40045785
    1028279 9n2b:LP (2.2) BS02 rna N/A GO:0000027 ... P0ADY7 40045785
    1028280 9n2b:LQ (2.2) BS01 rna N/A GO:0000027 ... P0AG44 40045785
    1028281 9n2b:LR (2.2) BS01 rna N/A GO:0002181 ... P0C018 40045785
    1028282 9n2b:LR (2.2) BS02 rna N/A GO:0002181 ... P0C018 40045785
    1028283 9n2b:LS (2.2) BS01 rna N/A GO:0000027 ... P0A7K6 40045785
    1028284 9n2b:LS (2.2) BS02 rna N/A GO:0000027 ... P0A7K6 40045785
    1028285 9n2b:LT (2.2) BS01 rna N/A GO:0000027 ... P0A7L3 40045785
    1028286 9n2b:LU (2.2) BS01 rna N/A GO:0002181 ... P0AG48 40045785
    1028287 9n2b:LV (2.2) BS01 rna N/A GO:0002181 ... P61175 40045785
    1028288 9n2b:LW (2.2) BS01 rna N/A GO:0000027 ... P0ADZ0 40045785
    1028289 9n2b:LX (2.2) BS01 rna N/A GO:0000027 ... P60624 40045785
    1028290 9n2b:LY (2.2) BS01 rna N/A GO:0000027 ... P68919 40045785
    1028291 9n2b:LY (2.2) BS02 rna N/A GO:0000027 ... P68919 40045785
    1028292 9n2b:La (2.2) BS01 rna N/A GO:0000027 ... P0A7L8 40045785
    1028293 9n2b:La (2.2) BS02 rna N/A GO:0000027 ... P0A7L8 40045785
    1028294 9n2b:La (2.2) BS03 rna N/A GO:0000027 ... P0A7L8 40045785
    1028295 9n2b:Lb (2.2) BS01 rna N/A GO:0000027 ... P0A7M2 40045785
    1028296 9n2b:Lc (2.2) BS01 rna N/A GO:0000027 ... P0A7M6 40045785
    1028297 9n2b:Ld (2.2) BS01 rna N/A GO:0000027 ... P0AG51 40045785
    1028298 9n2b:Ld (2.2) BS02 rna N/A GO:0000027 ... P0AG51 40045785
    1028299 9n2b:Le (2.2) BS01 rna N/A GO:0002181 ... P0A7M9 40045785
    1028300 9n2b:Le (2.2) BS02 rna N/A GO:0002181 ... P0A7M9 40045785
    1028301 9n2b:Le (2.2) BS03 ZN N/A GO:0002181 ... P0A7M9 40045785
    1028302 9n2b:Lf (2.2) BS01 rna N/A GO:0000027 ... P0A7N4 40045785
    1028303 9n2b:Lg (2.2) BS01 rna N/A GO:0000027 ... P0A7N9 40045785
    1028304 9n2b:Lh (2.2) BS01 rna N/A GO:0002181 ... P0A7P5 40045785
    1028305 9n2b:Li (2.2) BS01 rna N/A GO:0002181 ... P0A7Q1 40045785
    1028306 9n2b:Lj (2.2) BS01 rna N/A GO:0002181 ... P0A7Q6 40045785
    1028307 9n2b:Lj (2.2) BS02 ZN N/A GO:0002181 ... P0A7Q6 40045785
    1028308 9n2b:SB (2.2) BS01 rna N/A GO:0000028 ... P0A7V0 40045785
    1028309 9n2b:SB (2.2) BS02 ZN N/A GO:0000028 ... P0A7V0 40045785
    1028310 9n2b:SC (2.2) BS01 rna N/A GO:0000028 ... P0A7V3 40045785
    1028311 9n2b:SD (2.2) BS01 rna N/A GO:0000028 ... P0A7V8 40045785
    1028312 9n2b:SE (2.2) BS01 rna N/A GO:0000028 ... P0A7W1 40045785
    1028313 9n2b:SE (2.2) BS02 rna N/A GO:0000028 ... P0A7W1 40045785
    1028314 9n2b:SF (2.2) BS01 rna N/A GO:0002181 ... P02358 40045785
    1028315 9n2b:SG (2.2) BS01 rna N/A GO:0000028 ... P02359 40045785
    1028316 9n2b:SG (2.2) BS02 rna N/A GO:0000028 ... P02359 40045785
    1028317 9n2b:SH (2.2) BS01 rna N/A GO:0000028 ... P0A7W7 40045785
    1028318 9n2b:SI (2.2) BS01 rna N/A GO:0002181 ... P0A7X3 40045785
    1028319 9n2b:SI (2.2) BS02 rna N/A GO:0002181 ... P0A7X3 40045785
    1028320 9n2b:SJ (2.2) BS01 rna N/A GO:0000049 ... P0A7R5 40045785
    1028321 9n2b:SK (2.2) BS01 rna N/A GO:0002181 ... P0A7R9 40045785
    1028322 9n2b:SL (2.2) BS01 rna N/A GO:0000049 ... P0A7S3 40045785
    1028323 9n2b:SM (2.2) BS01 rna N/A GO:0000049 ... P0A7S9 40045785
    1028324 9n2b:SM (2.2) BS02 rna N/A GO:0000049 ... P0A7S9 40045785
    1028325 9n2b:SN (2.2) BS01 rna N/A GO:0000028 ... P0AG59 40045785
    1028326 9n2b:SO (2.2) BS01 rna N/A GO:0000028 ... P0ADZ4 40045785
    1028327 9n2b:SO (2.2) BS02 rna N/A GO:0000028 ... P0ADZ4 40045785
    1028328 9n2b:SP (2.2) BS01 rna N/A GO:0000028 ... P0A7T3 40045785
    1028329 9n2b:SQ (2.2) BS01 rna N/A GO:0000028 ... P0AG63 40045785
    1028330 9n2b:SR (2.2) BS01 rna N/A GO:0002181 ... P0A7T7 40045785
    1028331 9n2b:SS (2.2) BS01 rna N/A GO:0002181 ... P0A7U3 40045785
    1028332 9n2b:ST (2.2) BS01 rna N/A GO:0000028 ... P0A7U7 40045785
    1028333 9n2b:SU (2.2) BS01 rna N/A GO:0000028 ... P68679 40045785
    1028334 9n2b:SU (2.2) BS02 rna N/A GO:0000028 ... P68679 40045785
    1028335 9n2c:LB (2.4) BS01 rna N/A GO:0000027 ... P60422 40045785
    1028336 9n2c:LB (2.4) BS02 MG N/A GO:0000027 ... P60422 40045785
    1028337 9n2c:LB (2.4) BS03 MG N/A GO:0000027 ... P60422 40045785
    1028338 9n2c:LC (2.4) BS01 rna N/A GO:0000027 ... P60438 40045785
    1028339 9n2c:LD (2.4) BS01 rna N/A GO:0001070 ... P60723 40045785
    1028340 9n2c:LD (2.4) BS02 MG N/A GO:0001070 ... P60723 40045785
    1028341 9n2c:LE (2.4) BS01 rna N/A GO:0000027 ... P62399 40045785
    1028342 9n2c:LE (2.4) BS02 rna N/A GO:0000027 ... P62399 40045785
    1028343 9n2c:LE (2.4) BS03 rna N/A GO:0000027 ... P62399 40045785
    1028344 9n2c:LE (2.4) BS04 MG N/A GO:0000027 ... P62399 40045785
    1028345 9n2c:LF (2.4) BS01 rna N/A GO:0000027 ... P0AG55 40045785
    1028346 9n2c:LI (2.4) BS01 rna N/A GO:0002181 ... P0A7R1 40045785
    1028347 9n2c:LM (2.4) BS01 rna N/A GO:0002181 ... P0AA10 40045785
    1028348 9n2c:LN (2.4) BS01 rna N/A GO:0002181 ... P0ADY3 40045785
    1028349 9n2c:LN (2.4) BS02 rna N/A GO:0002181 ... P0ADY3 40045785
    1028350 9n2c:LO (2.4) BS01 rna N/A GO:0002181 ... P02413 40045785
    1028351 9n2c:LP (2.4) BS01 rna N/A GO:0000027 ... P0ADY7 40045785
    1028352 9n2c:LP (2.4) BS02 rna N/A GO:0000027 ... P0ADY7 40045785
    1028353 9n2c:LQ (2.4) BS01 rna N/A GO:0000027 ... P0AG44 40045785
    1028354 9n2c:LR (2.4) BS01 rna N/A GO:0002181 ... P0C018 40045785
    1028355 9n2c:LR (2.4) BS02 rna N/A GO:0002181 ... P0C018 40045785
    1028356 9n2c:LS (2.4) BS01 rna N/A GO:0000027 ... P0A7K6 40045785
    1028357 9n2c:LS (2.4) BS02 rna N/A GO:0000027 ... P0A7K6 40045785
    1028358 9n2c:LT (2.4) BS01 rna N/A GO:0000027 ... P0A7L3 40045785
    1028359 9n2c:LU (2.4) BS01 rna N/A GO:0002181 ... P0AG48 40045785
    1028360 9n2c:LV (2.4) BS01 rna N/A GO:0002181 ... P61175 40045785
    1028361 9n2c:LW (2.4) BS01 rna N/A GO:0000027 ... P0ADZ0 40045785
    1028362 9n2c:LX (2.4) BS01 rna N/A GO:0000027 ... P60624 40045785
    1028363 9n2c:LY (2.4) BS01 rna N/A GO:0000027 ... P68919 40045785
    1028364 9n2c:La (2.4) BS01 rna N/A GO:0000027 ... P0A7L8 40045785
    1028365 9n2c:La (2.4) BS02 rna N/A GO:0000027 ... P0A7L8 40045785
    1028366 9n2c:La (2.4) BS03 rna N/A GO:0000027 ... P0A7L8 40045785
    1028367 9n2c:Lb (2.4) BS01 rna N/A GO:0000027 ... P0A7M2 40045785
    1028368 9n2c:Lc (2.4) BS01 rna N/A GO:0000027 ... P0A7M6 40045785
    1028369 9n2c:Ld (2.4) BS01 rna N/A GO:0000027 ... P0AG51 40045785
    1028370 9n2c:Ld (2.4) BS02 rna N/A GO:0000027 ... P0AG51 40045785
    1028371 9n2c:Le (2.4) BS01 rna N/A GO:0002181 ... P0A7M9 40045785
    1028372 9n2c:Le (2.4) BS02 rna N/A GO:0002181 ... P0A7M9 40045785
    1028373 9n2c:Le (2.4) BS03 ZN N/A GO:0002181 ... P0A7M9 40045785
    1028374 9n2c:Lf (2.4) BS01 rna N/A GO:0000027 ... P0A7N4 40045785
    1028375 9n2c:Lg (2.4) BS01 rna N/A GO:0000027 ... P0A7N9 40045785
    1028376 9n2c:Lh (2.4) BS01 rna N/A GO:0002181 ... P0A7P5 40045785
    1028377 9n2c:Li (2.4) BS01 rna N/A GO:0002181 ... P0A7Q1 40045785
    1028378 9n2c:Lj (2.4) BS01 rna N/A GO:0002181 ... P0A7Q6 40045785
    1028379 9n2c:Lj (2.4) BS02 ZN N/A GO:0002181 ... P0A7Q6 40045785
    1028380 9n2c:SB (2.4) BS01 rna N/A GO:0000028 ... P0A7V0 40045785
    1028381 9n2c:SB (2.4) BS02 ZN N/A GO:0000028 ... P0A7V0 40045785
    1028382 9n2c:SC (2.4) BS01 rna N/A GO:0000028 ... P0A7V3 40045785
    1028383 9n2c:SD (2.4) BS01 rna N/A GO:0000028 ... P0A7V8 40045785
    1028384 9n2c:SE (2.4) BS01 rna N/A GO:0000028 ... P0A7W1 40045785
    1028385 9n2c:SF (2.4) BS01 rna N/A GO:0002181 ... P02358 40045785
    1028386 9n2c:SG (2.4) BS01 rna N/A GO:0000028 ... P02359 40045785
    1028387 9n2c:SG (2.4) BS02 rna N/A GO:0000028 ... P02359 40045785
    1028388 9n2c:SH (2.4) BS01 rna N/A GO:0000028 ... P0A7W7 40045785
    1028389 9n2c:SI (2.4) BS01 rna N/A GO:0002181 ... P0A7X3 40045785
    1028390 9n2c:SI (2.4) BS02 rna N/A GO:0002181 ... P0A7X3 40045785
    1028391 9n2c:SJ (2.4) BS01 rna N/A GO:0000049 ... P0A7R5 40045785
    1028392 9n2c:SK (2.4) BS01 rna N/A GO:0002181 ... P0A7R9 40045785
    1028393 9n2c:SL (2.4) BS01 rna N/A GO:0000049 ... P0A7S3 40045785
    1028394 9n2c:SM (2.4) BS01 rna N/A GO:0000049 ... P0A7S9 40045785
    1028395 9n2c:SM (2.4) BS02 rna N/A GO:0000049 ... P0A7S9 40045785
    1028396 9n2c:SN (2.4) BS01 rna N/A GO:0000028 ... P0AG59 40045785
    1028397 9n2c:SO (2.4) BS01 rna N/A GO:0000028 ... P0ADZ4 40045785
    1028398 9n2c:SO (2.4) BS02 rna N/A GO:0000028 ... P0ADZ4 40045785
    1028399 9n2c:SP (2.4) BS01 rna N/A GO:0000028 ... P0A7T3 40045785
    1028400 9n2c:SQ (2.4) BS01 rna N/A GO:0000028 ... P0AG63 40045785

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).