SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1029601 9n6y:SL (3.65) BS04 ZN N/A GO:0000447 ... Q05498 41162712
    1029602 9n6y:SM (3.65) BS01 rna N/A GO:0005515 ... P53941 41162712
    1029603 9n6y:SM (3.65) BS02 rna N/A GO:0005515 ... P53941 41162712
    1029604 9n6y:SN (3.65) BS01 rna N/A GO:0000462 ... P36144 41162712
    1029605 9n6y:SN (3.65) BS02 rna N/A GO:0000462 ... P36144 41162712
    1029606 9n6y:SP (3.65) BS01 rna N/A GO:0000447 ... P35194 41162712
    1029607 9n6y:SQ (3.65) BS01 rna N/A GO:0000447 ... Q12035 41162712
    1029608 9n6y:SQ (3.65) BS02 rna N/A GO:0000447 ... Q12035 41162712
    1029609 9n6y:SQ (3.65) BS03 rna N/A GO:0000447 ... Q12035 41162712
    1029610 9n6y:SR (3.65) BS01 rna N/A GO:0000462 ... P0CX29 41162712
    1029611 9n6y:SS (3.65) BS01 rna N/A GO:0000447 ... Q04500 41162712
    1029612 9n6y:SS (3.65) BS02 rna N/A GO:0000447 ... Q04500 41162712
    1029613 9n6y:ST (3.65) BS01 rna N/A GO:0000028 ... Q99207 41162712
    1029614 9n6y:ST (3.65) BS02 rna N/A GO:0000028 ... Q99207 41162712
    1029615 9n6y:SU (3.65) BS01 rna N/A GO:0000028 ... Q06512 41162712
    1029616 9n6y:SV (3.65) BS01 rna N/A GO:0003674 ... P40470 41162712
    1029617 9n6y:SW (3.65) BS01 rna N/A GO:0000056 ... Q99216 41162712
    1029618 9n6y:SY (3.65) BS01 rna N/A GO:0000447 ... P34247 41162712
    1029619 9n6y:SY (3.65) BS02 rna N/A GO:0000447 ... P34247 41162712
    1029620 9n6y:SY (3.65) BS03 rna N/A GO:0000447 ... P34247 41162712
    1029621 9n6y:SZ (3.65) BS01 rna N/A GO:0000447 ... P38333 41162712
    1029622 9n6z:L4 (4.74) BS01 rna N/A GO:0002181 ... P0CX35 41162712
    1029623 9n6z:L5 (4.74) BS01 rna N/A GO:0000054 ... P26783 41162712
    1029624 9n6z:L6 (4.74) BS01 rna N/A GO:0000462 ... P0CX37 41162712
    1029625 9n6z:L8 (4.74) BS01 rna N/A GO:0000462 ... P0CX39 41162712
    1029626 9n6z:L9 (4.74) BS01 rna N/A GO:0000462 ... O13516 41162712
    1029627 9n6z:LC (4.74) BS01 rna N/A GO:0000462 ... P0CX51 41162712
    1029628 9n6z:LD (4.74) BS01 rna N/A GO:0000028 ... P0CX47 41162712
    1029629 9n6z:LE (4.74) BS01 rna N/A GO:0002181 ... P0C0W1 41162712
    1029630 9n6z:LF (4.74) BS01 rna N/A GO:0000462 ... P0CX31 41162712
    1029631 9n6z:LF (4.74) BS02 peptide N/A GO:0000462 ... P0CX31 41162712
    1029632 9n6z:LG (4.74) BS01 rna N/A GO:0000028 ... Q3E7X9 41162712
    1029633 9n6z:LH (4.74) BS01 rna N/A GO:0000462 ... Q02931 41162712
    1029634 9n6z:LN (4.74) BS01 rna N/A GO:0000462 ... Q06679 41162712
    1029635 9n6z:LO (4.74) BS01 rna N/A GO:0000028 ... P25635 41162712
    1029636 9n6z:LO (4.74) BS02 rna N/A GO:0000028 ... P25635 41162712
    1029637 9n6z:LO (4.74) BS03 rna N/A GO:0000028 ... P25635 41162712
    1029638 9n6z:LP (4.74) BS01 rna N/A GO:0000447 ... Q02354 41162712
    1029639 9n6z:LQ (4.74) BS01 rna N/A GO:0000447 ... Q12220 41162712
    1029640 9n6z:LS (4.74) BS01 rna N/A GO:0000292 ... P40362 41162712
    1029641 9n6z:LT (4.74) BS01 rna N/A GO:0003674 ... Q06078 41162712
    1029642 9n6z:LT (4.74) BS02 rna N/A GO:0003674 ... Q06078 41162712
    1029643 9n6z:LU (4.74) BS01 rna N/A GO:0000462 ... P33750 41162712
    1029644 9n6z:LU (4.74) BS02 rna N/A GO:0000462 ... P33750 41162712
    1029645 9n6z:LW (4.74) BS01 rna N/A GO:0000447 ... P40055 41162712
    1029646 9n6z:NA (4.74) BS01 rna N/A GO:0000447 ... P47083 41162712
    1029647 9n6z:NB (4.74) BS01 rna N/A GO:0000447 ... Q12136 41162712
    1029648 9n6z:NB (4.74) BS02 rna N/A GO:0000447 ... Q12136 41162712
    1029649 9n6z:NE (4.74) BS01 rna N/A GO:0000462 ... P40546 41162712
    1029650 9n6z:NF (4.74) BS01 rna N/A GO:0000462 ... P05756 41162712
    1029651 9n6z:NG (4.74) BS01 rna N/A GO:0000028 ... P06367 41162712
    1029652 9n6z:NH (4.74) BS01 rna N/A GO:0000028 ... P53254 41162712
    1029653 9n6z:NI (4.74) BS01 rna N/A GO:0000028 ... P25368 41162712
    1029654 9n6z:NK (4.74) BS01 rna N/A GO:0000447 ... P25586 41162712
    1029655 9n6z:NM (4.74) BS01 rna N/A GO:0000462 ... P33442 41162712
    1029656 9n6z:NN (4.74) BS01 rna N/A GO:0000462 ... Q06631 41162712
    1029657 9n6z:NQ (4.74) BS01 rna N/A GO:0000028 ... P35997 41162712
    1029658 9n6z:SB (4.74) BS01 rna N/A GO:0000447 ... Q12499 41162712
    1029659 9n6z:SD (4.74) BS01 rna N/A GO:0000451 ... P15646 41162712
    1029660 9n6z:SE (4.74) BS01 rna N/A GO:0000245 ... P39990 41162712
    1029661 9n6z:SF (4.74) BS01 rna N/A GO:0000245 ... P39990 41162712
    1029662 9n6z:SG (4.74) BS01 rna N/A GO:0000447 ... Q06506 41162712
    1029663 9n6z:SH (4.74) BS01 rna N/A GO:0000447 ... Q08096 41162712
    1029664 9n6z:SI (4.74) BS01 rna N/A GO:0000462 ... Q08965 41162712
    1029665 9n6z:SJ (4.74) BS01 rna N/A GO:0000447 ... Q06287 41162712
    1029666 9n6z:SK (4.74) BS01 rna N/A GO:0000447 ... Q06287 41162712
    1029667 9n6z:SM (4.74) BS01 rna N/A GO:0005515 ... P53941 41162712
    1029668 9n6z:SP (4.74) BS01 rna N/A GO:0000447 ... P35194 41162712
    1029669 9n6z:SQ (4.74) BS01 rna N/A GO:0000447 ... Q12035 41162712
    1029670 9n6z:SR (4.74) BS01 rna N/A GO:0000462 ... P0CX29 41162712
    1029671 9n6z:ST (4.74) BS01 rna N/A GO:0000028 ... Q99207 41162712
    1029672 9n6z:ST (4.74) BS02 rna N/A GO:0000028 ... Q99207 41162712
    1029673 9n6z:SW (4.74) BS01 rna N/A GO:0000056 ... Q99216 41162712
    1029674 9n6z:SY (4.74) BS01 rna N/A GO:0000447 ... P34247 41162712
    1029675 9n6z:SZ (4.74) BS01 rna N/A GO:0000447 ... P38333 41162712
    1029676 9n70:L4 (5.17) BS01 rna N/A GO:0002181 ... P0CX35 41162712
    1029677 9n70:L5 (5.17) BS01 rna N/A GO:0000054 ... P26783 41162712
    1029678 9n70:L6 (5.17) BS01 rna N/A GO:0000462 ... P0CX37 41162712
    1029679 9n70:L8 (5.17) BS01 rna N/A GO:0000462 ... P0CX39 41162712
    1029680 9n70:L9 (5.17) BS01 rna N/A GO:0000462 ... O13516 41162712
    1029681 9n70:LC (5.17) BS01 rna N/A GO:0000462 ... P0CX51 41162712
    1029682 9n70:LD (5.17) BS01 rna N/A GO:0000028 ... P0CX47 41162712
    1029683 9n70:LE (5.17) BS01 rna N/A GO:0002181 ... P0C0W1 41162712
    1029684 9n70:LF (5.17) BS01 rna N/A GO:0000462 ... P0CX31 41162712
    1029685 9n70:LF (5.17) BS02 peptide N/A GO:0000462 ... P0CX31 41162712
    1029686 9n70:LG (5.17) BS01 rna N/A GO:0000028 ... Q3E7X9 41162712
    1029687 9n70:LH (5.17) BS01 rna N/A GO:0000462 ... Q02931 41162712
    1029688 9n70:LN (5.17) BS01 rna N/A GO:0000462 ... Q06679 41162712
    1029689 9n70:LO (5.17) BS01 rna N/A GO:0000028 ... P25635 41162712
    1029690 9n70:LQ (5.17) BS01 rna N/A GO:0000447 ... Q12220 41162712
    1029691 9n70:LU (5.17) BS01 rna N/A GO:0000462 ... P33750 41162712
    1029692 9n70:LU (5.17) BS02 rna N/A GO:0000462 ... P33750 41162712
    1029693 9n70:LV (5.17) BS01 rna N/A GO:0000462 ... P48234 41162712
    1029694 9n70:LX (5.17) BS01 rna N/A GO:0000049 ... P53914 41162712
    1029695 9n70:LZ (5.17) BS01 rna N/A GO:0003723 ... P32899 41162712
    1029696 9n70:NA (5.17) BS01 rna N/A GO:0000447 ... P47083 41162712
    1029697 9n70:NB (5.17) BS01 rna N/A GO:0000447 ... Q12136 41162712
    1029698 9n70:NF (5.17) BS01 rna N/A GO:0000462 ... P05756 41162712
    1029699 9n70:NG (5.17) BS01 rna N/A GO:0000028 ... P06367 41162712
    1029700 9n70:NH (5.17) BS01 rna N/A GO:0000028 ... P53254 41162712
    1029701 9n70:NH (5.17) BS02 peptide N/A GO:0000028 ... P53254 41162712
    1029702 9n70:NM (5.17) BS01 rna N/A GO:0000462 ... P33442 41162712
    1029703 9n70:NN (5.17) BS01 rna N/A GO:0000462 ... Q06631 41162712
    1029704 9n70:NQ (5.17) BS01 rna N/A GO:0000028 ... P35997 41162712
    1029705 9n70:OH (5.17) BS01 rna N/A GO:0000028 ... P48589 41162712
    1029706 9n70:OU (5.17) BS01 rna N/A GO:0000028 ... P05759 41162712
    1029707 9n70:SA (5.17) BS01 rna N/A GO:0000154 ... Q12460 41162712
    1029708 9n70:SB (5.17) BS01 rna N/A GO:0000447 ... Q12499 41162712
    1029709 9n70:SE (5.17) BS01 rna N/A GO:0000245 ... P39990 41162712
    1029710 9n70:SF (5.17) BS01 rna N/A GO:0000245 ... P39990 41162712
    1029711 9n70:SG (5.17) BS01 rna N/A GO:0000447 ... Q06506 41162712
    1029712 9n70:SH (5.17) BS01 rna N/A GO:0000447 ... Q08096 41162712
    1029713 9n70:SI (5.17) BS01 rna N/A GO:0000462 ... Q08965 41162712
    1029714 9n70:SJ (5.17) BS01 rna N/A GO:0000447 ... Q06287 41162712
    1029715 9n70:SK (5.17) BS01 rna N/A GO:0000447 ... Q06287 41162712
    1029716 9n70:SL (5.17) BS01 rna N/A GO:0000447 ... Q05498 41162712
    1029717 9n70:SM (5.17) BS01 rna N/A GO:0005515 ... P53941 41162712
    1029718 9n70:SP (5.17) BS01 rna N/A GO:0000447 ... P35194 41162712
    1029719 9n70:SQ (5.17) BS01 rna N/A GO:0000447 ... Q12035 41162712
    1029720 9n70:SR (5.17) BS01 rna N/A GO:0000462 ... P0CX29 41162712
    1029721 9n70:ST (5.17) BS01 rna N/A GO:0000028 ... Q99207 41162712
    1029722 9n70:SW (5.17) BS01 rna N/A GO:0000056 ... Q99216 41162712
    1029723 9n70:SY (5.17) BS01 rna N/A GO:0000447 ... P34247 41162712
    1029724 9n70:SZ (5.17) BS01 rna N/A GO:0000447 ... P38333 41162712
    1029725 9n72:L3 (5.94) BS01 rna N/A GO:0000054 ... P0CX55 N/A
    1029726 9n72:L4 (5.94) BS01 rna N/A GO:0002181 ... P0CX35 N/A
    1029727 9n72:L5 (5.94) BS01 rna N/A GO:0000054 ... P26783 N/A
    1029728 9n72:L6 (5.94) BS01 rna N/A GO:0000462 ... P0CX37 N/A
    1029729 9n72:L8 (5.94) BS01 rna N/A GO:0000462 ... P0CX39 N/A
    1029730 9n72:L9 (5.94) BS01 rna N/A GO:0000462 ... O13516 N/A
    1029731 9n72:LC (5.94) BS01 rna N/A GO:0000462 ... P0CX51 N/A
    1029732 9n72:LD (5.94) BS01 rna N/A GO:0000028 ... P0CX47 N/A
    1029733 9n72:LE (5.94) BS01 rna N/A GO:0002181 ... P0C0W1 N/A
    1029734 9n72:LF (5.94) BS01 rna N/A GO:0000462 ... P0CX31 N/A
    1029735 9n72:LF (5.94) BS02 peptide N/A GO:0000462 ... P0CX31 N/A
    1029736 9n72:LG (5.94) BS01 rna N/A GO:0000028 ... Q3E7X9 N/A
    1029737 9n72:LH (5.94) BS01 rna N/A GO:0000462 ... Q02931 N/A
    1029738 9n72:LN (5.94) BS01 rna N/A GO:0000462 ... Q06679 N/A
    1029739 9n72:LO (5.94) BS01 rna N/A GO:0000028 ... P25635 N/A
    1029740 9n72:LQ (5.94) BS01 rna N/A GO:0000447 ... Q12220 N/A
    1029741 9n72:LU (5.94) BS01 rna N/A GO:0000462 ... P33750 N/A
    1029742 9n72:LU (5.94) BS02 rna N/A GO:0000462 ... P33750 N/A
    1029743 9n72:LV (5.94) BS01 rna N/A GO:0000462 ... P48234 N/A
    1029744 9n72:LZ (5.94) BS01 rna N/A GO:0003723 ... P32899 N/A
    1029745 9n72:NA (5.94) BS01 rna N/A GO:0000447 ... P47083 N/A
    1029746 9n72:NB (5.94) BS01 rna N/A GO:0000447 ... Q12136 N/A
    1029747 9n72:NF (5.94) BS01 rna N/A GO:0000462 ... P05756 N/A
    1029748 9n72:NG (5.94) BS01 rna N/A GO:0000028 ... P06367 N/A
    1029749 9n72:NI (5.94) BS01 rna N/A GO:0000028 ... P25368 N/A
    1029750 9n72:NM (5.94) BS01 rna N/A GO:0000462 ... P33442 N/A
    1029751 9n72:NN (5.94) BS01 rna N/A GO:0000462 ... Q06631 N/A
    1029752 9n72:NP (5.94) BS01 rna N/A GO:0000054 ... P07280 N/A
    1029753 9n72:NQ (5.94) BS01 rna N/A GO:0000028 ... P35997 N/A
    1029754 9n72:OH (5.94) BS01 rna N/A GO:0000028 ... P48589 N/A
    1029755 9n72:OU (5.94) BS01 rna N/A GO:0000028 ... P05759 N/A
    1029756 9n72:SA (5.94) BS01 rna N/A GO:0000154 ... Q12460 N/A
    1029757 9n72:SB (5.94) BS01 rna N/A GO:0000447 ... Q12499 N/A
    1029758 9n72:SE (5.94) BS01 rna N/A GO:0000245 ... P39990 N/A
    1029759 9n72:SF (5.94) BS01 rna N/A GO:0000245 ... P39990 N/A
    1029760 9n72:SG (5.94) BS01 rna N/A GO:0000447 ... Q06506 N/A
    1029761 9n72:SH (5.94) BS01 rna N/A GO:0000447 ... Q08096 N/A
    1029762 9n72:SI (5.94) BS01 rna N/A GO:0000462 ... Q08965 N/A
    1029763 9n72:SJ (5.94) BS01 rna N/A GO:0000447 ... Q06287 N/A
    1029764 9n72:SK (5.94) BS01 rna N/A GO:0000447 ... Q06287 N/A
    1029765 9n72:SL (5.94) BS01 rna N/A GO:0000447 ... Q05498 N/A
    1029766 9n72:SM (5.94) BS01 rna N/A GO:0005515 ... P53941 N/A
    1029767 9n72:SP (5.94) BS01 rna N/A GO:0000447 ... P35194 N/A
    1029768 9n72:SR (5.94) BS01 rna N/A GO:0000462 ... P0CX29 N/A
    1029769 9n72:ST (5.94) BS01 rna N/A GO:0000028 ... Q99207 N/A
    1029770 9n72:ST (5.94) BS02 rna N/A GO:0000028 ... Q99207 N/A
    1029771 9n72:SW (5.94) BS01 rna N/A GO:0000056 ... Q99216 N/A
    1029772 9n72:SY (5.94) BS01 rna N/A GO:0000447 ... P34247 N/A
    1029773 9n72:SZ (5.94) BS01 rna N/A GO:0000447 ... P38333 N/A
    1029774 9n73:L3 (5.96) BS01 rna N/A GO:0000054 ... P0CX55 41162712
    1029775 9n73:L4 (5.96) BS01 rna N/A GO:0002181 ... P0CX35 41162712
    1029776 9n73:L5 (5.96) BS01 rna N/A GO:0000054 ... P26783 41162712
    1029777 9n73:L6 (5.96) BS01 rna N/A GO:0000462 ... P0CX37 41162712
    1029778 9n73:L8 (5.96) BS01 rna N/A GO:0000462 ... P0CX39 41162712
    1029779 9n73:L9 (5.96) BS01 rna N/A GO:0000462 ... O13516 41162712
    1029780 9n73:LC (5.96) BS01 rna N/A GO:0000462 ... P0CX51 41162712
    1029781 9n73:LD (5.96) BS01 rna N/A GO:0000028 ... P0CX47 41162712
    1029782 9n73:LE (5.96) BS01 rna N/A GO:0002181 ... P0C0W1 41162712
    1029783 9n73:LF (5.96) BS01 rna N/A GO:0000462 ... P0CX31 41162712
    1029784 9n73:LG (5.96) BS01 rna N/A GO:0000028 ... Q3E7X9 41162712
    1029785 9n73:LH (5.96) BS01 rna N/A GO:0000462 ... Q02931 41162712
    1029786 9n73:LN (5.96) BS01 rna N/A GO:0000462 ... Q06679 41162712
    1029787 9n73:LO (5.96) BS01 rna N/A GO:0000028 ... P25635 41162712
    1029788 9n73:LQ (5.96) BS01 rna N/A GO:0000447 ... Q12220 41162712
    1029789 9n73:LS (5.96) BS01 rna N/A GO:0000292 ... P40362 41162712
    1029790 9n73:LU (5.96) BS01 rna N/A GO:0000462 ... P33750 41162712
    1029791 9n73:LU (5.96) BS02 rna N/A GO:0000462 ... P33750 41162712
    1029792 9n73:LV (5.96) BS01 rna N/A GO:0000462 ... P48234 41162712
    1029793 9n73:LW (5.96) BS01 rna N/A GO:0000447 ... P40055 41162712
    1029794 9n73:LX (5.96) BS01 rna N/A GO:0000049 ... P53914 41162712
    1029795 9n73:NA (5.96) BS01 rna N/A GO:0000447 ... P47083 41162712
    1029796 9n73:NB (5.96) BS01 rna N/A GO:0000447 ... Q12136 41162712
    1029797 9n73:NF (5.96) BS01 rna N/A GO:0000462 ... P05756 41162712
    1029798 9n73:NG (5.96) BS01 rna N/A GO:0000028 ... P06367 41162712
    1029799 9n73:NH (5.96) BS01 peptide N/A GO:0000028 ... P53254 41162712
    1029800 9n73:NI (5.96) BS01 rna N/A GO:0000028 ... P25368 41162712

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).