SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1030401 9n8p:I (9.0) BS01 GAL N/A GO:0019031 ... P03452 40244672
    1030402 9n8p:I (9.0) BS02 SIA N/A GO:0019031 ... P03452 40244672
    1030403 9n8p:K (9.0) BS01 GAL N/A GO:0019031 ... P03452 40244672
    1030404 9n8p:K (9.0) BS02 SIA N/A GO:0019031 ... P03452 40244672
    1030405 9n8r:A (1.62) BS01 CA N/A N/A N/A N/A
    1030406 9n8w:A (3.5) BS01 ZN N/A GO:0005886 ... P0AD03 41565823
    1030407 9n8w:A (3.5) BS02 ZN N/A GO:0005886 ... P0AD03 41565823
    1030408 9n8x:A (3.5) BS01 ZN N/A GO:0005886 ... P0AD03 41565823
    1030409 9n8x:A (3.5) BS02 ZN N/A GO:0005886 ... P0AD03 41565823
    1030410 9n92:E (3.44) BS01 IHP N/A N/A Q82230 41381513
    1030411 9n92:L (3.44) BS01 IHP N/A N/A Q82230 41381513
    1030412 9n92:N (3.44) BS01 IHP N/A N/A Q82230 41381513
    1030413 9n92:O (3.44) BS01 IHP N/A N/A Q82230 41381513
    1030414 9n92:P (3.44) BS01 IHP N/A N/A Q82230 41381513
    1030415 9n96:A (3.18) BS01 rna N/A GO:0000243 ... P62318 41495886
    1030416 9n96:B (3.18) BS01 rna N/A N/A P14678 41495886
    1030417 9n96:C (3.18) BS01 rna N/A GO:0003723 ... Q969L4 41495886
    1030418 9n96:C (3.18) BS02 rna N/A GO:0003723 ... Q969L4 41495886
    1030419 9n96:D (3.18) BS01 rna N/A N/A N/A 41495886
    1030420 9n96:E (3.18) BS01 rna N/A GO:0000244 ... P62304 41495886
    1030421 9n96:F (3.18) BS01 rna N/A GO:0000244 ... P62306 41495886
    1030422 9n96:G (3.18) BS01 rna N/A GO:0000244 ... P62308 41495886
    1030423 9n98:A (2.05) BS01 A1BWH N/A N/A P0C6W3 N/A
    1030424 9n98:B (2.05) BS01 A1BWH N/A N/A P0C6W3 N/A
    1030425 9n99:A (2.0) BS01 A1BWH N/A N/A P0DTD1 N/A
    1030426 9n99:B (2.0) BS01 A1BWH N/A N/A P0DTD1 N/A
    1030427 9n9b:A (1.6) BS01 A1BFE N/A N/A P0DTD1 N/A
    1030428 9n9c:A (3.28) BS01 rna N/A N/A A0ABU6IR94 41781609
    1030429 9n9c:B (3.28) BS01 rna N/A N/A A0ABU6IR94 41781609
    1030430 9n9d:A (2.2) BS01 E6C N/A GO:0006508 ... P00784 40060639
    1030431 9n9e:A (2.6) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030432 9n9e:B (2.6) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030433 9n9e:B (2.6) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030434 9n9e:C (2.6) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030435 9n9f:A (2.91) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030436 9n9f:B (2.91) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030437 9n9f:B (2.91) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030438 9n9f:C (2.91) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030439 9n9f:C (2.91) BS02 ZN N/A GO:0000226 ... Q2XVP4 N/A
    1030440 9n9g:A (3.0) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030441 9n9g:B (3.0) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030442 9n9g:B (3.0) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030443 9n9g:F (3.0) BS01 peptide N/A GO:0000776 ... Q9BZD4 N/A
    1030444 9n9g:N (3.0) BS01 peptide N/A GO:0000070 ... O14777 N/A
    1030445 9n9g:a (3.0) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030446 9n9g:b (3.0) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030447 9n9g:b (3.0) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030448 9n9h:A (3.31) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030449 9n9h:B (3.31) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030450 9n9h:B (3.31) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030451 9n9h:a (3.31) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030452 9n9h:b (3.31) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030453 9n9h:b (3.31) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030454 9n9i:1 (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030455 9n9i:3 (3.3) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030456 9n9i:3 (3.3) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030457 9n9i:4 (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030458 9n9i:A (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030459 9n9i:B (3.3) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030460 9n9i:B (3.3) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030461 9n9i:C (3.3) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030462 9n9i:C (3.3) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030463 9n9i:a (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1030464 9n9i:b (3.3) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1030465 9n9i:b (3.3) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1030466 9n9j:A (3.2) BS01 rna N/A N/A Q9NYL4 41261126
    1030467 9n9j:D (3.2) BS01 rna N/A GO:0005048 ... P61619 41261126
    1030468 9n9j:G (3.2) BS01 rna N/A GO:0005515 ... Q9Y6X1 41261126
    1030469 9n9j:I (3.2) BS01 ELU N/A GO:0004579 ... P46977 41261126
    1030470 9n9j:LA (3.2) BS01 rna N/A GO:0002181 ... P62917 41261126
    1030471 9n9j:LA (3.2) BS02 MG N/A GO:0002181 ... P62917 41261126
    1030472 9n9j:LB (3.2) BS01 rna N/A GO:0002181 ... P39023 41261126
    1030473 9n9j:LC (3.2) BS01 rna N/A GO:0002181 ... P36578 41261126
    1030474 9n9j:LC (3.2) BS02 rna N/A GO:0002181 ... P36578 41261126
    1030475 9n9j:LD (3.2) BS01 rna N/A GO:0000027 ... P46777 41261126
    1030476 9n9j:LD (3.2) BS02 rna N/A GO:0000027 ... P46777 41261126
    1030477 9n9j:LE (3.2) BS01 rna N/A GO:0002181 ... Q02878 41261126
    1030478 9n9j:LF (3.2) BS01 rna N/A GO:0000463 ... P18124 41261126
    1030479 9n9j:LG (3.2) BS01 rna N/A GO:0000470 ... P62424 41261126
    1030480 9n9j:LG (3.2) BS02 rna N/A GO:0000470 ... P62424 41261126
    1030481 9n9j:LH (3.2) BS01 rna N/A GO:0002181 ... P32969 41261126
    1030482 9n9j:LI (3.2) BS01 rna N/A GO:0000027 ... Q96L21 41261126
    1030483 9n9j:LI (3.2) BS02 rna N/A GO:0000027 ... Q96L21 41261126
    1030484 9n9j:LI (3.2) BS03 rna N/A GO:0000027 ... Q96L21 41261126
    1030485 9n9j:LI (3.2) BS04 MG N/A GO:0000027 ... Q96L21 41261126
    1030486 9n9j:LJ (3.2) BS01 rna N/A GO:0000027 ... P62913 41261126
    1030487 9n9j:LJ (3.2) BS02 rna N/A GO:0000027 ... P62913 41261126
    1030488 9n9j:LL (3.2) BS01 rna N/A GO:0002181 ... P26373 41261126
    1030489 9n9j:LL (3.2) BS02 rna N/A GO:0002181 ... P26373 41261126
    1030490 9n9j:LM (3.2) BS01 rna N/A GO:0002181 ... P50914 41261126
    1030491 9n9j:LN (3.2) BS01 rna N/A GO:0002181 ... P61313 41261126
    1030492 9n9j:LN (3.2) BS02 rna N/A GO:0002181 ... P61313 41261126
    1030493 9n9j:LO (3.2) BS01 rna N/A GO:0002181 ... P40429 41261126
    1030494 9n9j:LP (3.2) BS01 rna N/A GO:0002181 ... P18621 41261126
    1030495 9n9j:LP (3.2) BS02 rna N/A GO:0002181 ... P18621 41261126
    1030496 9n9j:LQ (3.2) BS01 rna N/A GO:0002181 ... Q07020 41261126
    1030497 9n9j:LR (3.2) BS01 rna N/A GO:0002181 ... P84098 41261126
    1030498 9n9j:LS (3.2) BS01 rna N/A GO:0002181 ... Q02543 41261126
    1030499 9n9j:LS (3.2) BS02 rna N/A GO:0002181 ... Q02543 41261126
    1030500 9n9j:LT (3.2) BS01 rna N/A GO:0001650 ... P46778 41261126
    1030501 9n9j:LT (3.2) BS02 rna N/A GO:0001650 ... P46778 41261126
    1030502 9n9j:LU (3.2) BS01 rna N/A GO:0002181 ... P35268 41261126
    1030503 9n9j:LV (3.2) BS01 rna N/A GO:0000122 ... P62829 41261126
    1030504 9n9j:LW (3.2) BS01 rna N/A GO:0002181 ... P83731 41261126
    1030505 9n9j:LX (3.2) BS01 rna N/A GO:0002181 ... P62750 41261126
    1030506 9n9j:LX (3.2) BS02 rna N/A GO:0002181 ... P62750 41261126
    1030507 9n9j:LY (3.2) BS01 rna N/A GO:0002181 ... P61254 41261126
    1030508 9n9j:LY (3.2) BS02 rna N/A GO:0002181 ... P61254 41261126
    1030509 9n9j:LZ (3.2) BS01 rna N/A GO:0002181 ... P61353 41261126
    1030510 9n9j:La (3.2) BS01 rna N/A GO:0002181 ... P46776 41261126
    1030511 9n9j:Lb (3.2) BS01 rna N/A GO:0002181 ... P47914 41261126
    1030512 9n9j:Lc (3.2) BS01 rna N/A GO:0002181 ... P62888 41261126
    1030513 9n9j:Ld (3.2) BS01 rna N/A GO:0002181 ... P62899 41261126
    1030514 9n9j:Le (3.2) BS01 rna N/A GO:0002181 ... P62910 41261126
    1030515 9n9j:Le (3.2) BS02 MG N/A GO:0002181 ... P62910 41261126
    1030516 9n9j:Lf (3.2) BS01 rna N/A GO:0002181 ... P18077 41261126
    1030517 9n9j:Lg (3.2) BS01 rna N/A GO:0002181 ... P49207 41261126
    1030518 9n9j:Lg (3.2) BS02 ZN N/A GO:0002181 ... P49207 41261126
    1030519 9n9j:Lh (3.2) BS01 rna N/A GO:0000463 ... P42766 41261126
    1030520 9n9j:Lh (3.2) BS02 rna N/A GO:0000463 ... P42766 41261126
    1030521 9n9j:Li (3.2) BS01 rna N/A GO:0002181 ... Q9Y3U8 41261126
    1030522 9n9j:Lj (3.2) BS01 rna N/A GO:0000448 ... P61927 41261126
    1030523 9n9j:Lj (3.2) BS02 rna N/A GO:0000448 ... P61927 41261126
    1030524 9n9j:Lj (3.2) BS03 ZN N/A GO:0000448 ... P61927 41261126
    1030525 9n9j:Lk (3.2) BS01 rna N/A GO:0002181 ... P63173 41261126
    1030526 9n9j:Ll (3.2) BS01 rna N/A GO:0002181 ... P62891 41261126
    1030527 9n9j:Ll (3.2) BS02 rna N/A GO:0002181 ... P62891 41261126
    1030528 9n9j:Lm (3.2) BS01 rna N/A GO:0002181 ... P62987 41261126
    1030529 9n9j:Lm (3.2) BS02 ZN N/A GO:0002181 ... P62987 41261126
    1030530 9n9j:Lo (3.2) BS01 rna N/A GO:0002181 ... P83881 41261126
    1030531 9n9j:Lo (3.2) BS02 rna N/A GO:0002181 ... P83881 41261126
    1030532 9n9j:Lo (3.2) BS03 ZN N/A GO:0002181 ... P83881 41261126
    1030533 9n9j:Lp (3.2) BS01 rna N/A GO:0002181 ... P61513 41261126
    1030534 9n9j:Lp (3.2) BS02 ZN N/A GO:0002181 ... P61513 41261126
    1030535 9n9j:Lr (3.2) BS01 rna N/A GO:0002181 ... P46779 41261126
    1030536 9n9j:Ls (3.2) BS01 rna N/A GO:0002181 ... P05388 41261126
    1030537 9n9j:Lt (3.2) BS01 rna N/A GO:0002181 ... P30050 41261126
    1030538 9n9j:Lz (3.2) BS01 rna N/A GO:0002181 ... P62906 41261126
    1030539 9n9j:Lz (3.2) BS02 rna N/A GO:0002181 ... P62906 41261126
    1030540 9n9j:N2 (3.2) BS01 MAN N/A N/A P39656 41261126
    1030541 9n9j:O2 (3.2) BS01 BMA N/A N/A P04843 41261126
    1030542 9n9j:O2 (3.2) BS02 MAN N/A N/A P04843 41261126
    1030543 9n9j:y3 (3.2) BS01 rna N/A N/A P14625 41261126
    1030544 9n9l:A (1.637) BS01 A1BW2 N/A GO:0003677 ... P51449 40237323
    1030545 9n9l:B (1.637) BS01 A1BW2 N/A GO:0003677 ... P51449 40237323
    1030546 9n9m:A (3.38) BS01 dna N/A N/A A0ABU6IR94 41781609
    1030547 9n9m:A (3.38) BS02 dna N/A N/A A0ABU6IR94 41781609
    1030548 9n9m:A (3.38) BS03 rna N/A N/A A0ABU6IR94 41781609
    1030549 9n9m:B (3.38) BS01 rna N/A N/A A0ABU6IR94 41781609
    1030550 9n9n:A (1.24) BS01 peptide N/A N/A P01116 N/A
    1030551 9n9n:A (1.24) BS02 GDP N/A N/A P01116 N/A
    1030552 9n9n:B (1.24) BS01 peptide N/A N/A P01116 N/A
    1030553 9n9n:B (1.24) BS02 GDP N/A N/A P01116 N/A
    1030554 9n9o:A (3.42) BS01 dna N/A N/A A0ABU6IR94 41781609
    1030555 9n9o:A (3.42) BS02 dna N/A N/A A0ABU6IR94 41781609
    1030556 9n9o:A (3.42) BS03 rna N/A N/A A0ABU6IR94 41781609
    1030557 9n9o:B (3.42) BS01 rna N/A N/A A0ABU6IR94 41781609
    1030558 9n9p:D (2.95) BS01 MG N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030559 9n9p:D (2.95) BS02 ZN N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030560 9n9q:A (2.88) BS01 dna N/A N/A A0ABU6IR94 41781609
    1030561 9n9q:A (2.88) BS02 dna N/A N/A A0ABU6IR94 41781609
    1030562 9n9q:A (2.88) BS03 rna N/A N/A A0ABU6IR94 41781609
    1030563 9n9q:B (2.88) BS01 dna N/A N/A A0ABU6IR94 41781609
    1030564 9n9q:B (2.88) BS02 rna N/A N/A A0ABU6IR94 41781609
    1030565 9n9q:C (2.88) BS01 dna N/A GO:0006355 ... A0ABU6IR18 41781609
    1030566 9n9q:C (2.88) BS02 dna N/A GO:0006355 ... A0ABU6IR18 41781609
    1030567 9n9q:F (2.88) BS01 dna N/A GO:0003677 ... A0A3A1NXR2 41781609
    1030568 9n9q:G (2.88) BS01 dna N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030569 9n9q:G (2.88) BS02 dna N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030570 9n9q:G (2.88) BS03 MG N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030571 9n9q:G (2.88) BS04 ZN N/A GO:0000287 ... A0A3A1NXQ1 41781609
    1030572 9n9r:C (3.9) BS01 ZN N/A GO:0000278 ... Q9NYG5 40089476
    1030573 9n9t:A (1.5) BS01 A1BWH N/A N/A N/A N/A
    1030574 9n9t:B (1.5) BS01 A1BWH N/A N/A N/A N/A
    1030575 9n9u:A (2.3) BS01 A1BWH N/A N/A N/A N/A
    1030576 9n9v:A (2.5) BS01 A1BWH N/A N/A K9N638 N/A
    1030577 9n9v:B (2.5) BS01 A1BWH N/A N/A K9N638 N/A
    1030578 9n9w:A (3.31) BS01 ADP N/A N/A N/A 41688441
    1030579 9n9w:A (3.31) BS02 ANP N/A N/A N/A 41688441
    1030580 9n9w:A (3.31) BS03 MG N/A N/A N/A 41688441
    1030581 9n9w:A (3.31) BS04 MG N/A N/A N/A 41688441
    1030582 9n9x:A (2.3) BS01 A1BWL N/A GO:0004672 ... Q92918 40495786
    1030583 9n9x:B (2.3) BS01 A1BWL N/A GO:0004672 ... Q92918 40495786
    1030584 9n9y:B (3.15) BS01 ZN N/A GO:0004197 ... O94782 40315934
    1030585 9n9y:B (3.15) BS02 A1BWW N/A GO:0004197 ... O94782 40315934
    1030586 9na0:A (1.8) BS01 A1BWH N/A N/A N/A N/A
    1030587 9na2:A (1.99) BS01 A1BW0 N/A GO:0000287 ... Q9NWZ3 40375634
    1030588 9na2:B (1.99) BS01 A1BW0 N/A GO:0000287 ... Q9NWZ3 40375634
    1030589 9na3:A (2.1) BS01 A1BWX N/A GO:0000287 ... Q9NWZ3 40375634
    1030590 9na3:H0A0 (2.1) BS01 A1BWX N/A GO:0000287 ... Q9NWZ3 40375634
    1030591 9na4:A (2.33) BS01 A1BW1 N/A GO:0000287 ... Q9NWZ3 40375634
    1030592 9na4:B (2.33) BS01 A1BW1 N/A GO:0000287 ... Q9NWZ3 40375634
    1030593 9na4:C (2.33) BS01 A1BW1 N/A GO:0000287 ... Q9NWZ3 40375634
    1030594 9na4:D (2.33) BS01 A1BW1 N/A GO:0000287 ... Q9NWZ3 40375634
    1030595 9na5:A (1.73) BS01 A1BWY N/A GO:0000287 ... Q9NWZ3 40375634
    1030596 9na5:B (1.73) BS01 A1BWY N/A GO:0000287 ... Q9NWZ3 40375634
    1030597 9na5:C (1.73) BS01 A1BWY N/A GO:0000287 ... Q9NWZ3 40375634
    1030598 9na5:D (1.73) BS01 A1BWY N/A GO:0000287 ... Q9NWZ3 40375634
    1030599 9na6:A (2.14) BS01 A1BWZ N/A GO:0000287 ... Q9NWZ3 40375634
    1030600 9na6:B (2.14) BS01 A1BWZ N/A GO:0000287 ... Q9NWZ3 40375634

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).