SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1030801 9nb6:B (3.3) BS06 CA N/A GO:0005044 ... Q86VB7 40644526
    1030802 9nb6:B (3.3) BS07 CA N/A GO:0005044 ... Q86VB7 40644526
    1030803 9nb6:C (3.3) BS01 CA N/A GO:0005044 ... Q86VB7 40644526
    1030804 9nb6:C (3.3) BS02 CA N/A GO:0005044 ... Q86VB7 40644526
    1030805 9nb6:C (3.3) BS03 CA N/A GO:0005044 ... Q86VB7 40644526
    1030806 9nb6:C (3.3) BS04 CA N/A GO:0005044 ... Q86VB7 40644526
    1030807 9nb6:C (3.3) BS05 CA N/A GO:0005044 ... Q86VB7 40644526
    1030808 9nb6:C (3.3) BS06 CA N/A GO:0005044 ... Q86VB7 40644526
    1030809 9nb6:D (3.3) BS01 HEM N/A GO:0004601 ... P69905 40644526
    1030810 9nb6:D (3.3) BS02 OXY N/A GO:0004601 ... P69905 40644526
    1030811 9nb6:E (3.3) BS01 HEM N/A GO:0004601 ... P68871 40644526
    1030812 9nb6:E (3.3) BS02 OXY N/A GO:0004601 ... P68871 40644526
    1030813 9nb7:A (1.8) BS01 A1BWT N/A GO:0006508 ... P00784 40060639
    1030814 9nb8:A (4.0) BS01 CA N/A GO:0005044 ... Q86VB7 40644526
    1030815 9nb8:A (4.0) BS02 CA N/A GO:0005044 ... Q86VB7 40644526
    1030816 9nb8:A (4.0) BS03 CA N/A GO:0005044 ... Q86VB7 40644526
    1030817 9nb8:A (4.0) BS04 CA N/A GO:0005044 ... Q86VB7 40644526
    1030818 9nb8:A (4.0) BS05 CA N/A GO:0005044 ... Q86VB7 40644526
    1030819 9nb8:A (4.0) BS06 CA N/A GO:0005044 ... Q86VB7 40644526
    1030820 9nb8:A (4.0) BS07 CA N/A GO:0005044 ... Q86VB7 40644526
    1030821 9nb8:A (4.0) BS08 CA N/A GO:0005044 ... Q86VB7 40644526
    1030822 9nb8:A (4.0) BS09 CA N/A GO:0005044 ... Q86VB7 40644526
    1030823 9nb8:B (4.0) BS01 CA N/A GO:0005044 ... Q86VB7 40644526
    1030824 9nb8:B (4.0) BS02 CA N/A GO:0005044 ... Q86VB7 40644526
    1030825 9nb8:B (4.0) BS03 CA N/A GO:0005044 ... Q86VB7 40644526
    1030826 9nb8:B (4.0) BS04 CA N/A GO:0005044 ... Q86VB7 40644526
    1030827 9nb8:B (4.0) BS05 CA N/A GO:0005044 ... Q86VB7 40644526
    1030828 9nb8:B (4.0) BS06 CA N/A GO:0005044 ... Q86VB7 40644526
    1030829 9nb8:B (4.0) BS07 CA N/A GO:0005044 ... Q86VB7 40644526
    1030830 9nb8:C (4.0) BS01 CA N/A GO:0005044 ... Q86VB7 40644526
    1030831 9nb8:C (4.0) BS02 CA N/A GO:0005044 ... Q86VB7 40644526
    1030832 9nb8:C (4.0) BS03 CA N/A GO:0005044 ... Q86VB7 40644526
    1030833 9nb8:C (4.0) BS04 CA N/A GO:0005044 ... Q86VB7 40644526
    1030834 9nb8:D (4.0) BS01 HEM N/A GO:0004601 ... P69905 40644526
    1030835 9nb8:D (4.0) BS02 OXY N/A GO:0004601 ... P69905 40644526
    1030836 9nb8:E (4.0) BS01 HEM N/A GO:0004601 ... P68871 40644526
    1030837 9nb9:C (3.03) BS01 MN N/A GO:0000164 ... P62136 40568171
    1030838 9nb9:D (3.03) BS01 ATP N/A GO:0000287 ... P68135 40568171
    1030839 9nbf:A (1.8) BS01 E64 N/A GO:0006508 ... P00784 40060639
    1030840 9nbg:1 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030841 9nbg:2 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030842 9nbg:3 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030843 9nbg:4 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030844 9nbg:5 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030845 9nbg:6 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030846 9nbg:7 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030847 9nbg:8 (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030848 9nbg:A (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030849 9nbg:B (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030850 9nbg:C (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030851 9nbg:D (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030852 9nbg:E (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030853 9nbg:F (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030854 9nbg:G (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030855 9nbg:H (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030856 9nbg:I (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030857 9nbg:J (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030858 9nbg:K (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030859 9nbg:L (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030860 9nbg:M (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030861 9nbg:N (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030862 9nbg:O (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030863 9nbg:P (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030864 9nbg:Q (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030865 9nbg:R (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030866 9nbg:S (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030867 9nbg:T (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030868 9nbg:U (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030869 9nbg:V (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030870 9nbg:W (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030871 9nbg:X (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030872 9nbg:Y (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030873 9nbg:Z (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030874 9nbg:a (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030875 9nbg:b (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030876 9nbg:c (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030877 9nbg:d (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030878 9nbg:e (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030879 9nbg:f (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030880 9nbg:g (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030881 9nbg:h (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030882 9nbg:i (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030883 9nbg:j (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030884 9nbg:k (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030885 9nbg:l (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030886 9nbg:m (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030887 9nbg:n (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030888 9nbg:o (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030889 9nbg:p (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030890 9nbg:q (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030891 9nbg:r (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030892 9nbg:s (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030893 9nbg:t (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030894 9nbg:u (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030895 9nbg:v (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030896 9nbg:w (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030897 9nbg:x (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030898 9nbg:y (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030899 9nbg:z (2.57) BS01 SIA N/A GO:0005198 ... P03136 40704809
    1030900 9nbj:A (1.8) BS01 E6C N/A GO:0006508 ... P00784 40060639
    1030901 9nbk:A (1.8) BS01 E6D N/A GO:0006508 ... P00784 40060639
    1030902 9nbl:A (3.4) BS01 ADP N/A GO:0005524 ... J9ZFA3 40880530
    1030903 9nbl:A (3.4) BS02 ADP N/A GO:0005524 ... J9ZFA3 40880530
    1030904 9nbl:A (3.4) BS03 MG N/A GO:0005524 ... J9ZFA3 40880530
    1030905 9nbm:A (3.8) BS01 ADP N/A GO:0005524 ... J9ZFA3 40880530
    1030906 9nbm:A (3.8) BS02 ADP N/A GO:0005524 ... J9ZFA3 40880530
    1030907 9nbn:A (1.8) BS01 A1BWS N/A GO:0006508 ... P00784 40060639
    1030908 9nbo:A (3.0) BS01 ATP N/A GO:0005524 ... J9ZFA3 40880530
    1030909 9nbo:A (3.0) BS02 ATP N/A GO:0005524 ... J9ZFA3 40880530
    1030910 9nbo:A (3.0) BS03 MG N/A GO:0005524 ... J9ZFA3 40880530
    1030911 9nbp:A (2.8) BS01 E64 N/A GO:0006508 ... P00784 40720654
    1030912 9nbq:A (2.3) BS01 E6D N/A GO:0006508 ... P00784 40720654
    1030913 9nbs:A (1.8) BS01 A1BW4 N/A GO:0004672 ... Q92918 40495786
    1030914 9nbs:B (1.8) BS01 A1BW4 N/A GO:0004672 ... Q92918 40495786
    1030915 9nbt:D (2.91) BS01 MAN N/A N/A N/A 41735302
    1030916 9nbt:F (2.91) BS01 MAN N/A N/A N/A 41735302
    1030917 9nbt:N (2.91) BS01 MAN N/A N/A N/A 41735302
    1030918 9nbw:A (3.0) BS01 ATP N/A GO:0005524 ... J9ZFA3 40880530
    1030919 9nbw:A (3.0) BS02 ATP N/A GO:0005524 ... J9ZFA3 40880530
    1030920 9nbw:A (3.0) BS03 MG N/A GO:0005524 ... J9ZFA3 40880530
    1030921 9nbx:A (2.15) BS01 A1BW5 N/A GO:0004364 ... P08515
    Q13153
    40495786
    1030922 9nbx:B (2.15) BS01 A1BW5 N/A GO:0004364 ... P08515
    Q13153
    40495786
    1030923 9nby:J (3.16) BS01 MAN N/A N/A N/A 41735302
    1030924 9nby:O (3.16) BS01 MAN N/A N/A N/A 41735302
    1030925 9nby:S (3.16) BS01 FUC N/A N/A N/A 41735302
    1030926 9nc0:G (3.88) BS01 MAN N/A N/A N/A 41735302
    1030927 9nc0:H (3.88) BS01 MAN N/A N/A N/A 41735302
    1030928 9nc0:J (3.88) BS01 MAN N/A N/A N/A 41735302
    1030929 9nc1:A (2.4) BS01 E64 N/A GO:0006508 ... P00784 40720654
    1030930 9nc2:A (1.5) BS01 F97 N/A GO:0004672 ... Q92918 40495786
    1030931 9nc2:B (1.5) BS01 F97 N/A GO:0004672 ... Q92918 40495786
    1030932 9nc3:G (3.74) BS01 FUC N/A N/A N/A 41735302
    1030933 9nc3:J (3.74) BS01 MAN N/A N/A N/A 41735302
    1030934 9nc6:G (3.52) BS01 FUC N/A N/A N/A 41735302
    1030935 9nc8:H (3.55) BS01 MAN N/A N/A N/A 41735302
    1030936 9nc9:D (3.79) BS01 ADP N/A N/A N/A N/A
    1030937 9nc9:E (3.79) BS01 ADP N/A N/A N/A N/A
    1030938 9nc9:G (3.79) BS01 ADP N/A N/A N/A N/A
    1030939 9nc9:H (3.79) BS01 ADP N/A N/A N/A N/A
    1030940 9nc9:I (3.79) BS01 ADP N/A N/A N/A N/A
    1030941 9nc9:K (3.79) BS01 ADP N/A N/A N/A N/A
    1030942 9nc9:L (3.79) BS01 ADP N/A N/A N/A N/A
    1030943 9nc9:M (3.79) BS01 ADP N/A N/A N/A N/A
    1030944 9nc9:O (3.79) BS01 ADP N/A N/A N/A N/A
    1030945 9nc9:P (3.79) BS01 ADP N/A N/A N/A N/A
    1030946 9nc9:R (3.79) BS01 ADP N/A N/A N/A N/A
    1030947 9nca:A (2.5) BS01 E64 N/A GO:0006508 ... P00784 40720654
    1030948 9nca:A (2.5) BS02 E6C N/A GO:0006508 ... P00784 40720654
    1030949 9ncg:A (2.64) BS01 3OH N/A GO:0005737 ... O83889 N/A
    1030950 9ncn:C (2.86) BS01 peptide N/A N/A N/A N/A
    1030951 9ncn:D (2.86) BS01 peptide N/A N/A N/A N/A
    1030952 9ncn:E (2.86) BS01 peptide N/A N/A P06213 N/A
    1030953 9ncn:F (2.86) BS01 peptide N/A N/A P06213 N/A
    1030954 9nco:A (3.4) BS01 peptide N/A N/A P08069 N/A
    1030955 9nco:C (3.4) BS01 peptide N/A N/A N/A N/A
    1030956 9ncr:C (3.24) BS01 dna N/A GO:0071897 ... P03856 N/A
    1030957 9ncr:C (3.24) BS02 dna N/A GO:0071897 ... P03856 N/A
    1030958 9ncr:C (3.24) BS03 MG N/A GO:0071897 ... P03856 N/A
    1030959 9ncs:B (1.83) BS01 URI N/A GO:0003676 ... P61823 40835455
    1030960 9ncs:B (1.83) BS02 VVO N/A GO:0003676 ... P61823 40835455
    1030961 9nct:A (2.11) BS01 A1BW7 N/A GO:0000122 ... P61964 N/A
    1030962 9nct:B (2.11) BS01 A1BW7 N/A GO:0000122 ... P61964 N/A
    1030963 9ncv:A (1.58) BS01 A1BW8 N/A GO:0000122 ... P61964 N/A
    1030964 9ncv:B (1.58) BS01 A1BW8 N/A GO:0000122 ... P61964 N/A
    1030965 9ncv:C (1.58) BS01 A1BW8 N/A GO:0000122 ... P61964 N/A
    1030966 9ncv:D (1.58) BS01 A1BW8 N/A GO:0000122 ... P61964 N/A
    1030967 9ncw:A (1.58) BS01 A1BW9 N/A GO:0000122 ... P61964 N/A
    1030968 9ncw:B (1.58) BS01 A1BW9 N/A GO:0000122 ... P61964 N/A
    1030969 9ncz:A (1.97) BS01 MN N/A GO:0006281 ... Q96Q83 N/A
    1030970 9ncz:A (1.97) BS02 AKG N/A GO:0006281 ... Q96Q83 N/A
    1030971 9nd3:A (1.62) BS01 A1BW6 N/A GO:0004672 ... O60674 N/A
    1030972 9nd5:A (2.4) BS01 A1BXA N/A GO:0004672 ... O60674 N/A
    1030973 9ndj:A (2.87) BS01 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030974 9ndj:A (2.87) BS02 MG N/A GO:0005524 ... Q9I2U0 N/A
    1030975 9ndj:B (2.87) BS01 peptide N/A GO:0005524 ... Q9I2U0 N/A
    1030976 9ndj:B (2.87) BS02 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030977 9ndj:B (2.87) BS03 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030978 9ndj:C (2.87) BS01 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030979 9ndj:C (2.87) BS02 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030980 9ndj:D (2.87) BS01 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030981 9ndj:D (2.87) BS02 ADP N/A GO:0005524 ... Q9I2U0 N/A
    1030982 9ndj:E (2.87) BS01 ADP N/A GO:0005524 ... Q9I2U0 N/A
    1030983 9ndj:F (2.87) BS01 ATP N/A GO:0005524 ... Q9I2U0 N/A
    1030984 9ndp:0 (2.82) BS01 rna N/A GO:0003735 ... G1SK22 40859030
    1030985 9ndp:6 (2.82) BS01 rna N/A GO:0001891 ... G1SJB4 40859030
    1030986 9ndp:9 (2.82) BS01 rna N/A GO:0002181 ... G1U7M4 40859030
    1030987 9ndp:A (2.82) BS01 rna N/A GO:0002181 ... G1TT27 40859030
    1030988 9ndp:A (2.82) BS02 rna N/A GO:0002181 ... G1TT27 40859030
    1030989 9ndp:A (2.82) BS03 MG N/A GO:0002181 ... G1TT27 40859030
    1030990 9ndp:AA (2.82) BS01 rna N/A GO:0003735 ... G1T8A2 40859030
    1030991 9ndp:B (2.82) BS01 rna N/A GO:0003723 ... G1TL06 40859030
    1030992 9ndp:BB (2.82) BS01 rna N/A GO:0003735 ... G1SVB0 40859030
    1030993 9ndp:C (2.82) BS01 rna N/A GO:0003735 ... G1SVW5 40859030
    1030994 9ndp:C (2.82) BS02 rna N/A GO:0003735 ... G1SVW5 40859030
    1030995 9ndp:CC (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1030996 9ndp:CC (2.82) BS02 rna N/A GO:0003735 ... N/A 40859030
    1030997 9ndp:D (2.82) BS01 rna N/A GO:0000027 ... P19949 40859030
    1030998 9ndp:D (2.82) BS02 rna N/A GO:0000027 ... P19949 40859030
    1030999 9ndp:DD (2.82) BS01 rna N/A GO:0003723 ... B7NZS8 40859030
    1031000 9ndp:E (2.82) BS01 rna N/A GO:0000027 ... G1SKF7 40859030

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).