SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5146 5147 5148 5149 5150 5151 5152 5153 5154 5155 5156 5157 5158 5159 5160 5161 5162 5163 5164 5165 5166 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1031001 9ndp:EE (2.82) BS01 rna N/A GO:0003735 ... G1TRM4 40859030
    1031002 9ndp:EE (2.82) BS02 MG N/A GO:0003735 ... G1TRM4 40859030
    1031003 9ndp:EF (2.82) BS01 rna N/A N/A P20290 40859030
    1031004 9ndp:EG (2.82) BS01 rna N/A GO:0000122 ... Q13765 40859030
    1031005 9ndp:F (2.82) BS01 rna N/A GO:0000463 ... A0AAG1W3S3 40859030
    1031006 9ndp:F (2.82) BS02 rna N/A GO:0000463 ... A0AAG1W3S3 40859030
    1031007 9ndp:FF (2.82) BS01 rna N/A GO:0000028 ... G1TIB4 40859030
    1031008 9ndp:G (2.82) BS01 rna N/A GO:0003723 ... G1STW0 40859030
    1031009 9ndp:G (2.82) BS02 rna N/A GO:0003723 ... G1STW0 40859030
    1031010 9ndp:GG (2.82) BS01 rna N/A GO:0003723 ... G1SIZ2 40859030
    1031011 9ndp:H (2.82) BS01 rna N/A GO:0002181 ... G1SWI6 40859030
    1031012 9ndp:I (2.82) BS01 rna N/A GO:0003735 ... B7NZQ2 40859030
    1031013 9ndp:I (2.82) BS02 rna N/A GO:0003735 ... B7NZQ2 40859030
    1031014 9ndp:II (2.82) BS01 rna N/A GO:0003676 ... G1TPG3 40859030
    1031015 9ndp:J (2.82) BS01 rna N/A GO:0003735 ... G1TUB8 40859030
    1031016 9ndp:J (2.82) BS02 rna N/A GO:0003735 ... G1TUB8 40859030
    1031017 9ndp:J (2.82) BS03 rna N/A GO:0003735 ... G1TUB8 40859030
    1031018 9ndp:JJ (2.82) BS01 rna N/A GO:0003735 ... G1TZ76 40859030
    1031019 9ndp:KK (2.82) BS01 rna N/A GO:0003735 ... G1TU13 40859030
    1031020 9ndp:L (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031021 9ndp:L (2.82) BS02 rna N/A GO:0003735 ... N/A 40859030
    1031022 9ndp:LL (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031023 9ndp:LL (2.82) BS02 ZN N/A GO:0003735 ... N/A 40859030
    1031024 9ndp:M (2.82) BS01 rna N/A GO:0003723 ... G1SZ12 40859030
    1031025 9ndp:MM (2.82) BS01 rna N/A GO:0003735 ... G1T1F0 40859030
    1031026 9ndp:N (2.82) BS01 rna N/A GO:0002181 ... G1T0C1 40859030
    1031027 9ndp:N (2.82) BS02 rna N/A GO:0002181 ... G1T0C1 40859030
    1031028 9ndp:NA (2.82) BS01 rna N/A GO:0004379 ... O60551 40859030
    1031029 9ndp:NA (2.82) BS02 COA N/A GO:0004379 ... O60551 40859030
    1031030 9ndp:NB (2.82) BS01 rna N/A GO:0005516 ... P17861
    P30009
    40859030
    1031031 9ndp:NN (2.82) BS01 rna N/A GO:0003735 ... A0A5F9D2E6 40859030
    1031032 9ndp:O (2.82) BS01 rna N/A GO:0003729 ... G1TVS8 40859030
    1031033 9ndp:OO (2.82) BS01 rna N/A GO:0003735 ... G1TDB3 40859030
    1031034 9ndp:P (2.82) BS01 rna N/A GO:0002181 ... G1SCJ6 40859030
    1031035 9ndp:P (2.82) BS02 rna N/A GO:0002181 ... G1SCJ6 40859030
    1031036 9ndp:PP (2.82) BS01 rna N/A GO:0000028 ... G1TN62 40859030
    1031037 9ndp:Q (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031038 9ndp:QQ (2.82) BS01 rna N/A GO:0003735 ... G1SP51 40859030
    1031039 9ndp:QQ (2.82) BS02 rna N/A GO:0003735 ... G1SP51 40859030
    1031040 9ndp:R (2.82) BS01 rna N/A GO:0003723 ... N/A 40859030
    1031041 9ndp:R (2.82) BS02 rna N/A GO:0003723 ... N/A 40859030
    1031042 9ndp:RR (2.82) BS01 rna N/A GO:0003735 ... G1SFR8 40859030
    1031043 9ndp:S (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031044 9ndp:S (2.82) BS02 rna N/A GO:0003735 ... N/A 40859030
    1031045 9ndp:SS (2.82) BS01 rna N/A GO:0003723 ... G1TPV3 40859030
    1031046 9ndp:T (2.82) BS01 rna N/A GO:0003735 ... G1SHQ2 40859030
    1031047 9ndp:T (2.82) BS02 rna N/A GO:0003735 ... G1SHQ2 40859030
    1031048 9ndp:TT (2.82) BS01 rna N/A GO:0003735 ... G1TG89 40859030
    1031049 9ndp:U (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031050 9ndp:UU (2.82) BS01 rna N/A GO:0000462 ... G1SGX4 40859030
    1031051 9ndp:V (2.82) BS01 rna N/A GO:0000122 ... G1T6D1 40859030
    1031052 9ndp:VV (2.82) BS01 rna N/A GO:0003735 ... G1SZ47 40859030
    1031053 9ndp:W (2.82) BS01 rna N/A GO:0002181 ... G1SE28 40859030
    1031054 9ndp:WW (2.82) BS01 rna N/A GO:0000028 ... G1U0Q2 40859030
    1031055 9ndp:X (2.82) BS01 rna N/A GO:0003735 ... G1SE76 40859030
    1031056 9ndp:X (2.82) BS02 rna N/A GO:0003735 ... G1SE76 40859030
    1031057 9ndp:Y (2.82) BS01 rna N/A GO:0003723 ... G1SQH0 40859030
    1031058 9ndp:Y (2.82) BS02 rna N/A GO:0003723 ... G1SQH0 40859030
    1031059 9ndp:Z (2.82) BS01 rna N/A GO:0002181 ... G1TXF6 40859030
    1031060 9ndp:a (2.82) BS01 rna N/A GO:0003735 ... G1SNY0 40859030
    1031061 9ndp:b (2.82) BS01 rna N/A GO:0002181 ... G1SGR6 40859030
    1031062 9ndp:c (2.82) BS01 rna N/A GO:0003723 ... G1TDL2 40859030
    1031063 9ndp:d (2.82) BS01 rna N/A GO:0002181 ... G1SHG0 40859030
    1031064 9ndp:e (2.82) BS01 rna N/A GO:0003735 ... A0AAG1WVT3 40859030
    1031065 9ndp:f (2.82) BS01 rna N/A GO:0003735 ... G1SF08 40859030
    1031066 9ndp:g (2.82) BS01 rna N/A GO:0003735 ... G1TXG5 40859030
    1031067 9ndp:g (2.82) BS02 ZN N/A GO:0003735 ... G1TXG5 40859030
    1031068 9ndp:g (2.82) BS03 MG N/A GO:0003735 ... G1TXG5 40859030
    1031069 9ndp:h (2.82) BS01 rna N/A GO:0000463 ... G1SIT5 40859030
    1031070 9ndp:h (2.82) BS02 rna N/A GO:0000463 ... G1SIT5 40859030
    1031071 9ndp:i (2.82) BS01 rna N/A GO:0003735 ... G1TTQ5 40859030
    1031072 9ndp:j (2.82) BS01 rna N/A GO:0002181 ... U3KPD5 40859030
    1031073 9ndp:j (2.82) BS02 rna N/A GO:0002181 ... U3KPD5 40859030
    1031074 9ndp:j (2.82) BS03 ZN N/A GO:0002181 ... U3KPD5 40859030
    1031075 9ndp:k (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031076 9ndp:l (2.82) BS01 rna N/A GO:0003735 ... G1TTN1 40859030
    1031077 9ndp:l (2.82) BS02 rna N/A GO:0003735 ... G1TTN1 40859030
    1031078 9ndp:m (2.82) BS01 rna N/A GO:0003735 ... P0DXC2 40859030
    1031079 9ndp:m (2.82) BS02 ZN N/A GO:0003735 ... P0DXC2 40859030
    1031080 9ndp:o (2.82) BS01 rna N/A GO:0003735 ... A0A5F9D391 40859030
    1031081 9ndp:o (2.82) BS02 ZN N/A GO:0003735 ... A0A5F9D391 40859030
    1031082 9ndp:p (2.82) BS01 rna N/A GO:0003735 ... G1SY53 40859030
    1031083 9ndp:p (2.82) BS02 ZN N/A GO:0003735 ... G1SY53 40859030
    1031084 9ndp:q (2.82) BS01 rna N/A GO:0003735 ... N/A 40859030
    1031085 9ndp:r (2.82) BS01 rna N/A GO:0003735 ... G1U7L1 40859030
    1031086 9ndp:s (2.82) BS01 rna N/A GO:0000027 ... G1SPK4 40859030
    1031087 9ndp:t (2.82) BS01 rna N/A GO:0003735 ... G1SMR7 40859030
    1031088 9ndp:u (2.82) BS01 rna N/A GO:0003735 ... G1SS70 40859030
    1031089 9ndp:u (2.82) BS02 rna N/A GO:0003735 ... G1SS70 40859030
    1031090 9ndp:v (2.82) BS01 rna N/A GO:0003723 ... A0AAG1W6H3 40859030
    1031091 9ndp:w (2.82) BS01 rna N/A GO:0003723 ... G1TNM3 40859030
    1031092 9ndp:x (2.82) BS01 rna N/A GO:0003723 ... G1TK17 40859030
    1031093 9ndp:y (2.82) BS01 rna N/A GO:0003723 ... G1TFM5 40859030
    1031094 9ndp:y (2.82) BS02 MG N/A GO:0003723 ... G1TFM5 40859030
    1031095 9ndp:z (2.82) BS01 rna N/A GO:0003735 ... G1TM55 40859030
    1031096 9ndr:A (1.22) BS01 CU N/A N/A P0CS93 N/A
    1031097 9ndr:A (1.22) BS02 CA N/A N/A P0CS93 N/A
    1031098 9nds:A (3.4) BS01 peptide N/A GO:0016020 ... Q9TPS0 41481462
    1031099 9nds:D (3.4) BS01 peptide N/A N/A N/A 41481462
    1031100 9nds:E (3.4) BS01 peptide N/A N/A N/A 41481462
    1031101 9nds:H (3.4) BS01 peptide N/A GO:0016020 ... Q9TPS0 41481462
    1031102 9nds:J (3.4) BS01 peptide N/A N/A N/A 41481462
    1031103 9nds:K (3.4) BS01 peptide N/A N/A N/A 41481462
    1031104 9ndu:A (1.98) BS01 FE N/A N/A Q96SZ5 N/A
    1031105 9ndu:A (1.98) BS02 HLZ N/A N/A Q96SZ5 N/A
    1031106 9ndu:A (1.98) BS03 HLZ N/A N/A Q96SZ5 N/A
    1031107 9ndu:B (1.98) BS01 FE N/A N/A Q96SZ5 N/A
    1031108 9ndu:B (1.98) BS02 HLZ N/A N/A Q96SZ5 N/A
    1031109 9ndu:B (1.98) BS03 HLZ N/A N/A Q96SZ5 N/A
    1031110 9ndy:E (3.83) BS01 peptide N/A N/A A0AAE7VWE1 N/A
    1031111 9ndy:G (3.83) BS01 peptide N/A N/A A0AAE8B143 N/A
    1031112 9ne0:A (3.4) BS01 A1BXB N/A GO:0003899 ... P10236 41188384
    1031113 9ne0:B (3.4) BS01 A1BXB N/A GO:0000166 ... P10189 41188384
    1031114 9ne1:A (2.11) BS01 SAH N/A N/A N/A N/A
    1031115 9ne6:A (3.11) BS01 dna N/A GO:0000166 ... Q07864 40440070
    1031116 9ne6:A (3.11) BS02 dna N/A GO:0000166 ... Q07864 40440070
    1031117 9ne6:A (3.11) BS03 SF4 N/A GO:0000166 ... Q07864 40440070
    1031118 9ne7:A (3.53) BS01 dna N/A GO:0000166 ... Q07864 40440070
    1031119 9ne7:A (3.53) BS02 SF4 N/A GO:0000166 ... Q07864 40440070
    1031120 9ne8:A (3.6) BS01 dna N/A GO:0000166 ... Q07864 40440070
    1031121 9ne8:A (3.6) BS02 dna N/A GO:0000166 ... Q07864 40440070
    1031122 9ne8:A (3.6) BS03 SF4 N/A GO:0000166 ... Q07864 40440070
    1031123 9ne8:C (3.6) BS01 dna N/A GO:0000307 ... P12004 40440070
    1031124 9ne9:A (3.88) BS01 dna N/A GO:0000166 ... Q07864 40440070
    1031125 9ne9:A (3.88) BS02 dna N/A GO:0000166 ... Q07864 40440070
    1031126 9ne9:A (3.88) BS03 SF4 N/A GO:0000166 ... Q07864 40440070
    1031127 9ne9:C (3.88) BS01 dna N/A GO:0000307 ... P12004 40440070
    1031128 9ne9:D (3.88) BS01 dna N/A GO:0000307 ... P12004 40440070
    1031129 9nea:A (3.81) BS01 dna N/A GO:0000082 ... Q07864 40440070
    1031130 9nea:A (3.81) BS02 dna N/A GO:0000082 ... Q07864 40440070
    1031131 9nea:A (3.81) BS03 MG N/A GO:0000082 ... Q07864 40440070
    1031132 9nea:A (3.81) BS04 SF4 N/A GO:0000082 ... Q07864 40440070
    1031133 9nec:B (3.2) BS01 peptide N/A GO:0005216 ... P08510 40770100
    1031134 9nec:D (3.2) BS01 peptide N/A GO:0005216 ... P08510 40770100
    1031135 9ned:D (3.2) BS01 peptide N/A GO:0005216 ... P08510 40770100
    1031136 9nee:A (3.2) BS01 A1BXB N/A GO:0003899 ... P10236 41188384
    1031137 9nee:B (3.2) BS01 A1BXB N/A GO:0000166 ... P10189 41188384
    1031138 9neh:A (1.48) BS01 CA N/A N/A N/A N/A
    1031139 9neh:A (1.48) BS02 CU N/A N/A N/A N/A
    1031140 9nei:B (2.97) BS01 peptide N/A GO:0005216 ... P08510 40770100
    1031141 9nei:D (2.97) BS01 peptide N/A GO:0005216 ... P08510 40770100
    1031142 9nej:A (3.1) BS01 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031143 9nej:A (3.1) BS02 A1BXT N/A GO:0005886 ... P9WJY5 N/A
    1031144 9nej:A (3.1) BS03 A1BXW N/A GO:0005886 ... P9WJY5 N/A
    1031145 9nej:A (3.1) BS04 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031146 9nej:B (3.1) BS01 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031147 9nej:B (3.1) BS02 A1BXW N/A GO:0005886 ... P9WJY5 N/A
    1031148 9nej:B (3.1) BS03 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031149 9nej:B (3.1) BS04 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031150 9nej:B (3.1) BS05 A1ATG N/A GO:0005886 ... P9WJY5 N/A
    1031151 9nel:A (3.2) BS01 A1BXD N/A GO:0003899 ... P10236 41188384
    1031152 9nel:B (3.2) BS01 A1BXD N/A GO:0000166 ... P10189 41188384
    1031153 9nem:A (2.49) BS01 FAR N/A N/A Q13432 40754229
    1031154 9nem:B (2.49) BS01 FAR N/A N/A Q13432 40754229
    1031155 9nem:C (2.49) BS01 FAR N/A N/A Q13432 40754229
    1031156 9nem:D (2.49) BS01 FAR N/A N/A Q13432 40754229
    1031157 9nem:E (2.49) BS01 FAR N/A N/A Q13432 40754229
    1031158 9neo:A (3.13) BS01 A1BXX N/A N/A Q15562 N/A
    1031159 9neo:B (3.13) BS01 A1BXX N/A N/A Q15562 N/A
    1031160 9nep:A (2.7) BS01 rna N/A N/A N/A 41610850
    1031161 9nez:A (3.47) BS01 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031162 9nez:A (3.47) BS02 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031163 9nez:A (3.47) BS03 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031164 9nez:B (3.47) BS01 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031165 9nez:B (3.47) BS02 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031166 9nez:B (3.47) BS03 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031167 9nez:B (3.47) BS04 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031168 9nez:B (3.47) BS05 FAD N/A GO:0005737 ... Q8U2E5 40570843
    1031169 9nez:C (3.47) BS01 FES N/A GO:0005737 ... Q8U2E4 40570843
    1031170 9nez:C (3.47) BS02 FAD N/A GO:0005737 ... Q8U2E4 40570843
    1031171 9nez:D (3.47) BS01 NFU N/A GO:0005737 ... E7FI44 40570843
    1031172 9nez:E (3.47) BS01 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031173 9nez:E (3.47) BS02 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031174 9nez:E (3.47) BS03 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031175 9nez:F (3.47) BS01 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031176 9nez:F (3.47) BS02 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031177 9nez:F (3.47) BS03 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031178 9nez:F (3.47) BS04 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031179 9nez:F (3.47) BS05 FAD N/A GO:0005737 ... Q8U2E5 40570843
    1031180 9nez:G (3.47) BS01 FES N/A GO:0005737 ... Q8U2E4 40570843
    1031181 9nez:G (3.47) BS02 FAD N/A GO:0005737 ... Q8U2E4 40570843
    1031182 9nez:H (3.47) BS01 NFU N/A GO:0005737 ... E7FI44 40570843
    1031183 9nf0:A (3.06) BS01 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031184 9nf0:A (3.06) BS02 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031185 9nf0:A (3.06) BS03 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031186 9nf0:B (3.06) BS01 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031187 9nf0:B (3.06) BS02 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031188 9nf0:B (3.06) BS03 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031189 9nf0:B (3.06) BS04 SF4 N/A GO:0005737 ... Q8U2E5 40570843
    1031190 9nf0:B (3.06) BS05 FAD N/A GO:0005737 ... Q8U2E5 40570843
    1031191 9nf0:C (3.06) BS01 FES N/A GO:0005737 ... Q8U2E4 40570843
    1031192 9nf0:C (3.06) BS02 FAD N/A GO:0005737 ... Q8U2E4 40570843
    1031193 9nf0:C (3.06) BS03 NAP N/A GO:0005737 ... Q8U2E4 40570843
    1031194 9nf0:D (3.06) BS01 SF4 N/A GO:0005737 ... E7FI44 40570843
    1031195 9nf0:D (3.06) BS02 NFU N/A GO:0005737 ... E7FI44 40570843
    1031196 9nf0:D (3.06) BS03 MG N/A GO:0005737 ... E7FI44 40570843
    1031197 9nf0:E (3.06) BS01 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031198 9nf0:E (3.06) BS02 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031199 9nf0:E (3.06) BS03 SF4 N/A GO:0005737 ... E7FHU4 40570843
    1031200 9nf0:F (3.06) BS01 SF4 N/A GO:0005737 ... Q8U2E5 40570843

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).