SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1031401 9nh0:Dr (4.63) BS03 peptide N/A N/A Q5ZYC2 40986344
    1031402 9nh0:Dw (4.63) BS01 peptide N/A N/A Q5ZYC0 40986344
    1031403 9nh0:Dx (4.63) BS01 peptide N/A N/A Q5ZYC2 40986344
    1031404 9nh0:Dx (4.63) BS02 peptide N/A N/A Q5ZYC2 40986344
    1031405 9nh0:Dx (4.63) BS03 peptide N/A N/A Q5ZYC2 40986344
    1031406 9nh0:Dx (4.63) BS04 peptide N/A N/A Q5ZYC2 40986344
    1031407 9nh0:Ec (4.63) BS01 peptide N/A N/A Q5ZYC0 40986344
    1031408 9nh0:Ec (4.63) BS02 peptide N/A N/A Q5ZYC0 40986344
    1031409 9nh0:Ed (4.63) BS01 peptide N/A N/A Q5ZYC2 40986344
    1031410 9nh0:Ed (4.63) BS02 peptide N/A N/A Q5ZYC2 40986344
    1031411 9nh0:Ed (4.63) BS03 peptide N/A N/A Q5ZYC2 40986344
    1031412 9nh3:A (1.87) BS01 HEM N/A GO:0004096 ... P77872 40501634
    1031413 9nh3:B (1.87) BS01 HEM N/A GO:0004096 ... P77872 40501634
    1031414 9nh4:A (3.9) BS01 3CN N/A GO:0004888 ... P0C7B7 40668221
    1031415 9nh4:B (3.9) BS01 3CN N/A GO:0004888 ... P0C7B7 40668221
    1031416 9nh4:C (3.9) BS01 3CN N/A GO:0004888 ... P0C7B7 40668221
    1031417 9nh4:D (3.9) BS01 3CN N/A GO:0004888 ... P0C7B7 40668221
    1031418 9nh4:E (3.9) BS01 3CN N/A GO:0004888 ... P0C7B7 40668221
    1031419 9nh5:A (2.82) BS01 rna N/A GO:0000243 ... P62318 41495886
    1031420 9nh5:B (2.82) BS01 rna N/A N/A P14678 41495886
    1031421 9nh5:C (2.82) BS01 rna N/A GO:0003723 ... Q969L4 41495886
    1031422 9nh5:C (2.82) BS02 rna N/A GO:0003723 ... Q969L4 41495886
    1031423 9nh5:D (2.82) BS01 rna N/A GO:0005515 ... P83369 41495886
    1031424 9nh5:D (2.82) BS02 rna N/A GO:0005515 ... P83369 41495886
    1031425 9nh5:E (2.82) BS01 rna N/A GO:0000244 ... P62304 41495886
    1031426 9nh5:F (2.82) BS01 rna N/A GO:0000244 ... P62306 41495886
    1031427 9nh5:G (2.82) BS01 rna N/A GO:0000244 ... P62308 41495886
    1031428 9nh5:H (2.82) BS01 peptide N/A GO:0003723 ... Q9UKF6 41495886
    1031429 9nh5:H (2.82) BS02 ZN N/A GO:0003723 ... Q9UKF6 41495886
    1031430 9nh5:H (2.82) BS03 ZN N/A GO:0003723 ... Q9UKF6 41495886
    1031431 9nh5:I (2.82) BS01 peptide N/A GO:0003723 ... Q9P2I0 41495886
    1031432 9nh5:I (2.82) BS02 rna N/A GO:0003723 ... Q9P2I0 41495886
    1031433 9nh5:J (2.82) BS01 rna N/A N/A Q92797 41495886
    1031434 9nh5:J (2.82) BS02 rna N/A N/A Q92797 41495886
    1031435 9nh6:A (2.82) BS01 rna N/A GO:0000243 ... P62318 41495886
    1031436 9nh6:B (2.82) BS01 rna N/A N/A P14678 41495886
    1031437 9nh6:C (2.82) BS01 rna N/A GO:0003723 ... Q969L4 41495886
    1031438 9nh6:C (2.82) BS02 rna N/A GO:0003723 ... Q969L4 41495886
    1031439 9nh6:D (2.82) BS01 rna N/A GO:0005515 ... P83369 41495886
    1031440 9nh6:D (2.82) BS02 rna N/A GO:0005515 ... P83369 41495886
    1031441 9nh6:E (2.82) BS01 rna N/A GO:0000244 ... P62304 41495886
    1031442 9nh6:F (2.82) BS01 rna N/A GO:0000244 ... P62306 41495886
    1031443 9nh6:G (2.82) BS01 rna N/A GO:0000244 ... P62308 41495886
    1031444 9nh6:H (2.82) BS01 peptide N/A GO:0003723 ... Q9UKF6 41495886
    1031445 9nh6:H (2.82) BS02 ZN N/A GO:0003723 ... Q9UKF6 41495886
    1031446 9nh6:H (2.82) BS03 ZN N/A GO:0003723 ... Q9UKF6 41495886
    1031447 9nh6:I (2.82) BS01 peptide N/A GO:0003723 ... Q9P2I0 41495886
    1031448 9nh6:I (2.82) BS02 rna N/A GO:0003723 ... Q9P2I0 41495886
    1031449 9nh6:J (2.82) BS01 rna N/A N/A Q92797 41495886
    1031450 9nh8:A (3.2) BS01 dna N/A GO:0000786 ... P84233 40334658
    1031451 9nh8:A (3.2) BS02 dna N/A GO:0000786 ... P84233 40334658
    1031452 9nh8:B (3.2) BS01 dna N/A GO:0000786 ... P62799 40334658
    1031453 9nh8:B (3.2) BS02 dna N/A GO:0000786 ... P62799 40334658
    1031454 9nh8:C (3.2) BS01 dna N/A GO:0000786 ... Q6AZJ8 40334658
    1031455 9nh8:C (3.2) BS02 dna N/A GO:0000786 ... Q6AZJ8 40334658
    1031456 9nh8:D (3.2) BS01 dna N/A GO:0000786 ... P02281 40334658
    1031457 9nh8:D (3.2) BS02 dna N/A GO:0000786 ... P02281 40334658
    1031458 9nh8:E (3.2) BS01 dna N/A GO:0000786 ... P84233 40334658
    1031459 9nh8:E (3.2) BS02 dna N/A GO:0000786 ... P84233 40334658
    1031460 9nh8:F (3.2) BS01 dna N/A GO:0000786 ... P62799 40334658
    1031461 9nh8:F (3.2) BS02 dna N/A GO:0000786 ... P62799 40334658
    1031462 9nh8:G (3.2) BS01 dna N/A GO:0000786 ... Q6AZJ8 40334658
    1031463 9nh8:G (3.2) BS02 dna N/A GO:0000786 ... Q6AZJ8 40334658
    1031464 9nh8:G (3.2) BS03 ARG N/A GO:0000786 ... Q6AZJ8 40334658
    1031465 9nh8:H (3.2) BS01 dna N/A GO:0000786 ... P02281 40334658
    1031466 9nh8:H (3.2) BS02 dna N/A GO:0000786 ... P02281 40334658
    1031467 9nh8:W (3.2) BS01 dna N/A GO:0005524 ... O14646 40334658
    1031468 9nh8:W (3.2) BS02 dna N/A GO:0005524 ... O14646 40334658
    1031469 9nh8:W (3.2) BS03 peptide N/A GO:0005524 ... O14646 40334658
    1031470 9nh9:A (1.96) BS01 FE N/A N/A F8S6W0 40774922
    1031471 9nh9:A (1.96) BS02 FE N/A N/A F8S6W0 40774922
    1031472 9nh9:A (1.96) BS03 A1BX4 N/A N/A F8S6W0 40774922
    1031473 9nha:A (2.3) BS01 ZN N/A N/A P0DTD1 41698876
    1031474 9nha:A (2.3) BS02 ZN N/A N/A P0DTD1 41698876
    1031475 9nha:A (2.3) BS03 ZN N/A N/A P0DTD1 41698876
    1031476 9nha:A (2.3) BS04 A1BX5 N/A N/A P0DTD1 41698876
    1031477 9nhb:A (3.7) BS01 rna N/A GO:0000287 ... A8D8P8 40912244
    1031478 9nhb:A (3.7) BS02 rna N/A GO:0000287 ... A8D8P8 40912244
    1031479 9nhb:A (3.7) BS03 peptide N/A GO:0000287 ... A8D8P8 40912244
    1031480 9nhb:A (3.7) BS04 MG N/A GO:0000287 ... A8D8P8 40912244
    1031481 9nhc:A (3.6) BS01 rna N/A GO:0000287 ... A8D8P8 40912244
    1031482 9nhc:A (3.6) BS02 rna N/A GO:0000287 ... A8D8P8 40912244
    1031483 9nhc:A (3.6) BS03 MG N/A GO:0000287 ... A8D8P8 40912244
    1031484 9nhc:A (3.6) BS04 MG N/A GO:0000287 ... A8D8P8 40912244
    1031485 9nhc:E (3.6) BS01 rna N/A N/A A0A8R1WGS4 40912244
    1031486 9nhc:E (3.6) BS02 ZN N/A N/A A0A8R1WGS4 40912244
    1031487 9nhc:E (3.6) BS03 ZN N/A N/A A0A8R1WGS4 40912244
    1031488 9nhc:F (3.6) BS01 rna N/A GO:0005634 ... A0A8R2M2N1 40912244
    1031489 9nhc:F (3.6) BS02 ZN N/A GO:0005634 ... A0A8R2M2N1 40912244
    1031490 9nhd:A (4.1) BS01 rna N/A GO:0000287 ... A8D8P8 40912244
    1031491 9nhd:A (4.1) BS02 rna N/A GO:0000287 ... A8D8P8 40912244
    1031492 9nhd:A (4.1) BS03 MG N/A GO:0000287 ... A8D8P8 40912244
    1031493 9nhd:E (4.1) BS01 rna N/A N/A A0A8R1WGS4 40912244
    1031494 9nhe:A (4.2) BS01 rna N/A GO:0000287 ... A8D8P8 40912244
    1031495 9nhe:A (4.2) BS02 rna N/A GO:0000287 ... A8D8P8 40912244
    1031496 9nhe:A (4.2) BS03 MG N/A GO:0000287 ... A8D8P8 40912244
    1031497 9nhg:A (2.04) BS01 A1BX8 N/A GO:0003756 ... P0AEG4 N/A
    1031498 9nhg:B (2.04) BS01 A1BX8 N/A GO:0003756 ... P0AEG4 N/A
    1031499 9nhr:A (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031500 9nhr:B (1.95) BS01 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031501 9nhr:B (1.95) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031502 9nhr:B (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031503 9nhr:C (1.95) BS01 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031504 9nhr:C (1.95) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031505 9nhr:C (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031506 9nhr:D (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031507 9nhr:E (1.95) BS01 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031508 9nhr:E (1.95) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031509 9nhr:E (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031510 9nhr:F (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031511 9nhr:F (1.95) BS02 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031512 9nhr:F (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031513 9nhr:H (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031514 9nhr:H (1.95) BS02 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031515 9nhr:H (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031516 9nhr:I (1.95) BS01 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031517 9nhr:I (1.95) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031518 9nhr:I (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031519 9nhr:J (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031520 9nhr:J (1.95) BS02 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031521 9nhr:J (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031522 9nhr:K (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031523 9nhr:K (1.95) BS02 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031524 9nhr:K (1.95) BS03 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031525 9nhr:L (1.95) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031526 9nhr:L (1.95) BS02 A1BYB N/A GO:0004322 ... Q9HY79 40490679
    1031527 9nhs:A (4.2) BS01 rna N/A GO:0000287 ... A8D8P8 40912244
    1031528 9nhs:A (4.2) BS02 rna N/A GO:0000287 ... A8D8P8 40912244
    1031529 9nhs:A (4.2) BS03 MG N/A GO:0000287 ... A8D8P8 40912244
    1031530 9nhs:E (4.2) BS01 rna N/A N/A A0A8R1WGS4 40912244
    1031531 9nhs:E (4.2) BS02 rna N/A N/A A0A8R1WGS4 40912244
    1031532 9nhs:E (4.2) BS03 ZN N/A N/A A0A8R1WGS4 40912244
    1031533 9nhs:E (4.2) BS04 ZN N/A N/A A0A8R1WGS4 40912244
    1031534 9nhs:F (4.2) BS01 ZN N/A GO:0005634 ... A0A8R2M2N1 40912244
    1031535 9nht:A (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031536 9nht:A (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031537 9nht:B (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031538 9nht:B (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031539 9nht:C (1.85) BS01 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031540 9nht:C (1.85) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031541 9nht:C (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031542 9nht:D (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031543 9nht:D (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031544 9nht:D (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031545 9nht:E (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031546 9nht:E (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031547 9nht:F (1.85) BS01 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031548 9nht:G (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031549 9nht:G (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031550 9nht:G (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031551 9nht:H (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031552 9nht:H (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031553 9nht:I (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031554 9nht:I (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031555 9nht:I (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031556 9nht:J (1.85) BS01 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031557 9nht:J (1.85) BS02 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031558 9nht:J (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031559 9nht:K (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031560 9nht:K (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031561 9nht:K (1.85) BS03 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031562 9nht:L (1.85) BS01 HEM N/A GO:0004322 ... Q9HY79 40490679
    1031563 9nht:L (1.85) BS02 A1BYC N/A GO:0004322 ... Q9HY79 40490679
    1031564 9nhu:A (2.1) BS01 ZN N/A N/A P0DTD1 41698876
    1031565 9nhu:A (2.1) BS02 ZN N/A N/A P0DTD1 41698876
    1031566 9nhu:A (2.1) BS03 ZN N/A N/A P0DTD1 41698876
    1031567 9nhu:A (2.1) BS04 A1BYF N/A N/A P0DTD1 41698876
    1031568 9nhw:A (2.73) BS01 A1BYD N/A GO:0004672 ... P00533 40801664
    1031569 9ni0:A (1.51) BS01 NAP N/A GO:0004146 ... P0ABQ5 N/A
    1031570 9ni0:B (1.51) BS01 NAP N/A GO:0004146 ... P0ABQ5 N/A
    1031571 9nia:A (1.55) BS01 ETA N/A N/A Q9KR16 40906767
    1031572 9nic:A (1.96) BS01 A1BYA N/A GO:0003756 ... P0AEG4 N/A
    1031573 9nic:B (1.96) BS01 A1BYA N/A GO:0003756 ... P0AEG4 N/A
    1031574 9nig:A (3.20008) BS01 peptide N/A GO:0006955 ... P01903 40466907
    1031575 9nig:B (3.20008) BS01 peptide N/A GO:0006955 ... A0A1V1IGJ9 40466907
    1031576 9nig:C (3.20008) BS01 peptide N/A GO:0006955 ... P01903 40466907
    1031577 9nig:D (3.20008) BS01 peptide N/A GO:0006955 ... A0A1V1IGJ9 40466907
    1031578 9nig:E (3.20008) BS01 peptide N/A N/A N/A 40466907
    1031579 9nig:H (3.20008) BS01 peptide N/A GO:0006955 ... P01903 40466907
    1031580 9nig:I (3.20008) BS01 peptide N/A GO:0006955 ... A0A1V1IGJ9 40466907
    1031581 9nig:J (3.20008) BS01 peptide N/A N/A N/A 40466907
    1031582 9nig:M (3.20008) BS01 peptide N/A N/A N/A 40466907
    1031583 9nih:A (2.4) BS01 peptide N/A GO:0006955 ... P01903 40466907
    1031584 9nih:B (2.4) BS01 peptide N/A GO:0006955 ... A0A1V1IGJ9 40466907
    1031585 9nin:A (2.01) BS01 A1BYW N/A N/A Q8NEB9 N/A
    1031586 9nio:A (2.0) BS01 ZN N/A N/A P0DTD1 41698876
    1031587 9nio:A (2.0) BS02 ZN N/A N/A P0DTD1 41698876
    1031588 9nio:A (2.0) BS03 ZN N/A N/A P0DTD1 41698876
    1031589 9nio:A (2.0) BS04 A1BYG N/A N/A P0DTD1 41698876
    1031590 9niq:A (3.35) BS01 A1BYI N/A GO:0003824 ... Q92410 40852984
    1031591 9nir:A (2.7) BS01 A1BYU N/A GO:0002276 ... O14638 40914167
    1031592 9nir:A (2.7) BS02 ZN N/A GO:0002276 ... O14638 40914167
    1031593 9nir:A (2.7) BS03 ZN N/A GO:0002276 ... O14638 40914167
    1031594 9nir:A (2.7) BS04 CA N/A GO:0002276 ... O14638 40914167
    1031595 9nis:A (2.23) BS01 A1BYK N/A GO:0004672 ... P00533 40801664
    1031596 9nit:A (1.72) BS01 2A1 N/A N/A Q9KR16 40906767
    1031597 9niu:A (1.9) BS01 A1BYP N/A GO:0005319 ... O15540 N/A
    1031598 9niu:B (1.9) BS01 A1BYP N/A GO:0005319 ... O15540 N/A
    1031599 9niu:C (1.9) BS01 A1BYP N/A GO:0005319 ... O15540 N/A
    1031600 9niv:A (1.75) BS01 SEL N/A N/A Q9KR16 40906767

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).