SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1031601 9nj0:A (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031602 9nj0:A (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031603 9nj0:A (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031604 9nj0:A (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031605 9nj0:A (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031606 9nj0:B (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031607 9nj0:B (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031608 9nj0:B (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031609 9nj0:B (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031610 9nj0:B (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031611 9nj0:C (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031612 9nj0:C (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031613 9nj0:C (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031614 9nj0:C (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031615 9nj0:C (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031616 9nj0:D (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031617 9nj0:D (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031618 9nj0:D (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031619 9nj0:D (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031620 9nj0:D (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031621 9nj0:D (3.2) BS06 A1BYH N/A N/A K0EQQ2 N/A
    1031622 9nj0:E (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031623 9nj0:E (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031624 9nj0:E (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031625 9nj0:E (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031626 9nj0:E (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031627 9nj0:F (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031628 9nj0:F (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031629 9nj0:F (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031630 9nj0:F (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031631 9nj0:F (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031632 9nj0:G (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031633 9nj0:G (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031634 9nj0:G (3.2) BS03 MG N/A N/A K0EQQ2 N/A
    1031635 9nj0:G (3.2) BS04 TRT N/A N/A K0EQQ2 N/A
    1031636 9nj0:H (3.2) BS01 GZL N/A N/A K0EQQ2 N/A
    1031637 9nj0:H (3.2) BS02 GZL N/A N/A K0EQQ2 N/A
    1031638 9nj0:H (3.2) BS03 GZL N/A N/A K0EQQ2 N/A
    1031639 9nj0:H (3.2) BS04 MG N/A N/A K0EQQ2 N/A
    1031640 9nj0:H (3.2) BS05 TRT N/A N/A K0EQQ2 N/A
    1031641 9nj1:A (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031642 9nj1:A (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031643 9nj1:A (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031644 9nj1:A (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031645 9nj1:A (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031646 9nj1:A (3.15) BS06 TON N/A N/A K0EQQ2 N/A
    1031647 9nj1:B (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031648 9nj1:B (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031649 9nj1:B (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031650 9nj1:B (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031651 9nj1:B (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031652 9nj1:B (3.15) BS06 TRT N/A N/A K0EQQ2 N/A
    1031653 9nj1:C (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031654 9nj1:C (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031655 9nj1:C (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031656 9nj1:C (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031657 9nj1:C (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031658 9nj1:C (3.15) BS06 TON N/A N/A K0EQQ2 N/A
    1031659 9nj1:D (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031660 9nj1:D (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031661 9nj1:D (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031662 9nj1:D (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031663 9nj1:D (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031664 9nj1:D (3.15) BS06 TRT N/A N/A K0EQQ2 N/A
    1031665 9nj1:E (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031666 9nj1:E (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031667 9nj1:E (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031668 9nj1:E (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031669 9nj1:E (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031670 9nj1:E (3.15) BS06 TON N/A N/A K0EQQ2 N/A
    1031671 9nj1:F (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031672 9nj1:F (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031673 9nj1:F (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031674 9nj1:F (3.15) BS04 MG N/A N/A K0EQQ2 N/A
    1031675 9nj1:F (3.15) BS05 TRT N/A N/A K0EQQ2 N/A
    1031676 9nj1:G (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031677 9nj1:G (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031678 9nj1:G (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031679 9nj1:G (3.15) BS04 GZL N/A N/A K0EQQ2 N/A
    1031680 9nj1:G (3.15) BS05 MG N/A N/A K0EQQ2 N/A
    1031681 9nj1:G (3.15) BS06 TRT N/A N/A K0EQQ2 N/A
    1031682 9nj1:H (3.15) BS01 GZL N/A N/A K0EQQ2 N/A
    1031683 9nj1:H (3.15) BS02 GZL N/A N/A K0EQQ2 N/A
    1031684 9nj1:H (3.15) BS03 GZL N/A N/A K0EQQ2 N/A
    1031685 9nj1:H (3.15) BS04 MG N/A N/A K0EQQ2 N/A
    1031686 9nj1:H (3.15) BS05 TRT N/A N/A K0EQQ2 N/A
    1031687 9nj2:A (2.4) BS01 CA N/A N/A Q6DPL2 41771877
    1031688 9nj2:A (2.4) BS02 CA N/A N/A Q6DPL2 41771877
    1031689 9nj2:B (2.4) BS01 CA N/A N/A Q6DPL2 41771877
    1031690 9nj2:B (2.4) BS02 CA N/A N/A Q6DPL2 41771877
    1031691 9nj2:C (2.4) BS01 CA N/A N/A Q6DPL2 41771877
    1031692 9nj2:C (2.4) BS02 CA N/A N/A Q6DPL2 41771877
    1031693 9nj2:D (2.4) BS01 CA N/A N/A Q6DPL2 41771877
    1031694 9nj2:D (2.4) BS02 CA N/A N/A Q6DPL2 41771877
    1031695 9nj3:B (2.48) BS01 FUC N/A N/A N/A N/A
    1031696 9nj3:C (2.48) BS01 FUC N/A N/A N/A N/A
    1031697 9nj7:A (2.53) BS01 A1BYL N/A GO:0004672 ... P00533 40801664
    1031698 9nj9:C (2.6) BS01 FUC N/A N/A N/A N/A
    1031699 9njb:C (2.15) BS01 rna N/A GO:0000175 ... Q8TCS8 41361968
    1031700 9njb:C (2.15) BS02 MG N/A GO:0000175 ... Q8TCS8 41361968
    1031701 9njc:A (2.36) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031702 9njc:B (2.36) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031703 9njc:C (2.36) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031704 9njd:A (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031705 9njd:B (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031706 9njd:C (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031707 9nje:A (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031708 9nje:B (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031709 9nje:C (2.44) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1031710 9njf:1 (3.4) BS01 rna N/A GO:0000027 ... P0A7L0 N/A
    1031711 9njf:10 (3.4) BS01 rna N/A GO:0003735 ... P0A7J3 N/A
    1031712 9njf:11 (3.4) BS01 rna N/A GO:0000027 ... P0A7J7 N/A
    1031713 9njf:13 (3.4) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    1031714 9njf:14 (3.4) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    1031715 9njf:14 (3.4) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    1031716 9njf:15 (3.4) BS01 rna N/A GO:0002181 ... P02413 N/A
    1031717 9njf:16 (3.4) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    1031718 9njf:16 (3.4) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    1031719 9njf:17 (3.4) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    1031720 9njf:18 (3.4) BS01 rna N/A GO:0002181 ... P0C018 N/A
    1031721 9njf:18 (3.4) BS02 rna N/A GO:0002181 ... P0C018 N/A
    1031722 9njf:19 (3.4) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    1031723 9njf:19 (3.4) BS02 rna N/A GO:0000027 ... P0A7K6 N/A
    1031724 9njf:2 (3.4) BS01 rna N/A GO:0000027 ... P60422 N/A
    1031725 9njf:20 (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    1031726 9njf:21 (3.4) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    1031727 9njf:22 (3.4) BS01 rna N/A GO:0002181 ... P61175 N/A
    1031728 9njf:23 (3.4) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    1031729 9njf:24 (3.4) BS01 rna N/A GO:0000027 ... P60624 N/A
    1031730 9njf:25 (3.4) BS01 rna N/A GO:0000027 ... P68919 N/A
    1031731 9njf:27 (3.4) BS01 rna N/A GO:0003735 ... P0A7L8 N/A
    1031732 9njf:28 (3.4) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    1031733 9njf:29 (3.4) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    1031734 9njf:3 (3.4) BS01 rna N/A GO:0000027 ... P60438 N/A
    1031735 9njf:30 (3.4) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    1031736 9njf:30 (3.4) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    1031737 9njf:31 (3.4) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    1031738 9njf:31 (3.4) BS02 rna N/A GO:0002181 ... P0A7M9 N/A
    1031739 9njf:32 (3.4) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    1031740 9njf:33 (3.4) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    1031741 9njf:34 (3.4) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    1031742 9njf:35 (3.4) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    1031743 9njf:36 (3.4) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    1031744 9njf:36 (3.4) BS02 ZN N/A GO:0002181 ... P0A7Q6 N/A
    1031745 9njf:4 (3.4) BS01 rna N/A GO:0001070 ... P60723 N/A
    1031746 9njf:5 (3.4) BS01 rna N/A GO:0000027 ... P62399 N/A
    1031747 9njf:5 (3.4) BS02 rna N/A GO:0000027 ... P62399 N/A
    1031748 9njf:6 (3.4) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    1031749 9njf:9 (3.4) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    1031750 9njf:Y (3.4) BS01 rna N/A GO:0003747 ... P0A9U3 N/A
    1031751 9njf:Y (3.4) BS02 rna N/A GO:0003747 ... P0A9U3 N/A
    1031752 9njf:Y (3.4) BS03 rna N/A GO:0003747 ... P0A9U3 N/A
    1031753 9njf:Y (3.4) BS04 ATP N/A GO:0003747 ... P0A9U3 N/A
    1031754 9njf:Y (3.4) BS05 ATP N/A GO:0003747 ... P0A9U3 N/A
    1031755 9njf:sb (3.4) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    1031756 9njf:sc (3.4) BS01 rna N/A GO:0003676 ... P0A7V3 N/A
    1031757 9njf:sd (3.4) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    1031758 9njf:se (3.4) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    1031759 9njf:sf (3.4) BS01 rna N/A GO:0003735 ... P02358 N/A
    1031760 9njf:sg (3.4) BS01 rna N/A GO:0003723 ... P02359 N/A
    1031761 9njf:sh (3.4) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    1031762 9njf:si (3.4) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    1031763 9njf:sj (3.4) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    1031764 9njf:sk (3.4) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    1031765 9njf:sl (3.4) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    1031766 9njf:sm (3.4) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    1031767 9njf:sn (3.4) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    1031768 9njf:so (3.4) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    1031769 9njf:so (3.4) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    1031770 9njf:sp (3.4) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    1031771 9njf:sq (3.4) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    1031772 9njf:sr (3.4) BS01 rna N/A GO:0003735 ... P0A7T7 N/A
    1031773 9njf:ss (3.4) BS01 rna N/A GO:0003723 ... P0A7U3 N/A
    1031774 9njf:st (3.4) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    1031775 9njf:su (3.4) BS01 rna N/A GO:0000028 ... P68679 N/A
    1031776 9njg:A (2.1) BS01 ZN N/A N/A P0DTD1 41698876
    1031777 9njg:A (2.1) BS02 ZN N/A N/A P0DTD1 41698876
    1031778 9njg:A (2.1) BS03 ZN N/A N/A P0DTD1 41698876
    1031779 9njg:A (2.1) BS04 A1BYT N/A N/A P0DTD1 41698876
    1031780 9njh:A (2.29) BS01 dna N/A GO:0003684 ... Q9UNA4 40593703
    1031781 9njh:A (2.29) BS02 CA N/A GO:0003684 ... Q9UNA4 40593703
    1031782 9nji:A (2.6) BS01 CU N/A GO:0005507 ... Q9XAL8 40438172
    1031783 9nji:A (2.6) BS02 CU N/A GO:0005507 ... Q9XAL8 40438172
    1031784 9nji:A (2.6) BS03 CU N/A GO:0005507 ... Q9XAL8 40438172
    1031785 9nji:A (2.6) BS04 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031786 9nji:A (2.6) BS05 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031787 9nji:A (2.6) BS06 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031788 9nji:A (2.6) BS07 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031789 9njj:A (2.64) BS01 CU N/A GO:0005507 ... Q9XAL8 40438172
    1031790 9njj:A (2.64) BS02 CU N/A GO:0005507 ... Q9XAL8 40438172
    1031791 9njj:A (2.64) BS03 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031792 9njj:A (2.64) BS04 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031793 9njj:A (2.64) BS05 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031794 9njj:A (2.64) BS06 GLY N/A GO:0005507 ... Q9XAL8 40438172
    1031795 9njk:A (3.37) BS01 ADP N/A GO:0000086 ... P25454 40721016
    1031796 9njk:B (3.37) BS01 ADP N/A GO:0000086 ... P25454 40721016
    1031797 9njk:B (3.37) BS02 ADP N/A GO:0000086 ... P25454 40721016
    1031798 9njk:C (3.37) BS01 ADP N/A GO:0000086 ... P25454 40721016
    1031799 9njk:D (3.37) BS01 ADP N/A GO:0000086 ... P25454 40721016
    1031800 9njn:A (2.24) BS01 A1BYS N/A GO:0004672 ... P00533 40801664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).