SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5150 5151 5152 5153 5154 5155 5156 5157 5158 5159 5160 5161 5162 5163 5164 5165 5166 5167 5168 5169 5170 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1031801 9njo:A (1.8) BS01 MN N/A GO:0004146 ... P0ABQ4 N/A
    1031802 9njr:A (2.7) BS01 ADP N/A GO:0000150 ... P25453 40721016
    1031803 9njr:B (2.7) BS01 ADP N/A GO:0000150 ... P25453 40721016
    1031804 9njr:C (2.7) BS01 ADP N/A GO:0000150 ... P25453 40721016
    1031805 9njr:C (2.7) BS02 ADP N/A GO:0000150 ... P25453 40721016
    1031806 9njr:D (2.7) BS01 ADP N/A GO:0000150 ... P25453 40721016
    1031807 9njv:13 (3.1) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    1031808 9njv:14 (3.1) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    1031809 9njv:15 (3.1) BS01 rna N/A GO:0002181 ... P02413 N/A
    1031810 9njv:16 (3.1) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    1031811 9njv:16 (3.1) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    1031812 9njv:17 (3.1) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    1031813 9njv:18 (3.1) BS01 rna N/A GO:0002181 ... P0C018 N/A
    1031814 9njv:18 (3.1) BS02 rna N/A GO:0002181 ... P0C018 N/A
    1031815 9njv:19 (3.1) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    1031816 9njv:19 (3.1) BS02 rna N/A GO:0000027 ... P0A7K6 N/A
    1031817 9njv:2 (3.1) BS01 rna N/A GO:0000027 ... P60422 N/A
    1031818 9njv:20 (3.1) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    1031819 9njv:21 (3.1) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    1031820 9njv:22 (3.1) BS01 rna N/A GO:0002181 ... P61175 N/A
    1031821 9njv:23 (3.1) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    1031822 9njv:24 (3.1) BS01 rna N/A GO:0000027 ... P60624 N/A
    1031823 9njv:25 (3.1) BS01 rna N/A GO:0000027 ... P68919 N/A
    1031824 9njv:27 (3.1) BS01 rna N/A GO:0003735 ... P0A7L8 N/A
    1031825 9njv:27 (3.1) BS02 rna N/A GO:0003735 ... P0A7L8 N/A
    1031826 9njv:28 (3.1) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    1031827 9njv:29 (3.1) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    1031828 9njv:3 (3.1) BS01 rna N/A GO:0000027 ... P60438 N/A
    1031829 9njv:30 (3.1) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    1031830 9njv:30 (3.1) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    1031831 9njv:31 (3.1) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    1031832 9njv:32 (3.1) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    1031833 9njv:34 (3.1) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    1031834 9njv:35 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    1031835 9njv:36 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    1031836 9njv:4 (3.1) BS01 rna N/A GO:0001070 ... P60723 N/A
    1031837 9njv:5 (3.1) BS01 rna N/A GO:0000027 ... P62399 N/A
    1031838 9njv:5 (3.1) BS02 rna N/A GO:0000027 ... P62399 N/A
    1031839 9njv:5 (3.1) BS03 rna N/A GO:0000027 ... P62399 N/A
    1031840 9njv:6 (3.1) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    1031841 9njv:9 (3.1) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    1031842 9njv:sb (3.1) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    1031843 9njv:sc (3.1) BS01 rna N/A GO:0003676 ... P0A7V3 N/A
    1031844 9njv:sd (3.1) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    1031845 9njv:se (3.1) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    1031846 9njv:sf (3.1) BS01 rna N/A GO:0003735 ... P02358 N/A
    1031847 9njv:sg (3.1) BS01 rna N/A GO:0003723 ... P02359 N/A
    1031848 9njv:sh (3.1) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    1031849 9njv:si (3.1) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    1031850 9njv:sj (3.1) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    1031851 9njv:sk (3.1) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    1031852 9njv:sl (3.1) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    1031853 9njv:sm (3.1) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    1031854 9njv:sn (3.1) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    1031855 9njv:so (3.1) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    1031856 9njv:so (3.1) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    1031857 9njv:sp (3.1) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    1031858 9njv:sq (3.1) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    1031859 9njv:sr (3.1) BS01 rna N/A GO:0003735 ... P0A7T7 N/A
    1031860 9njv:ss (3.1) BS01 rna N/A GO:0003723 ... P0A7U3 N/A
    1031861 9njv:st (3.1) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    1031862 9njv:su (3.1) BS01 rna N/A GO:0000028 ... P68679 N/A
    1031863 9njw:A (2.4) BS01 HEM N/A GO:0004497 ... N/A 41075759
    1031864 9njw:A (2.4) BS02 CLR N/A GO:0004497 ... N/A 41075759
    1031865 9nk1:A (1.23) BS01 FMN N/A N/A A0A0N9XAG5 N/A
    1031866 9nk2:A (1.81) BS01 4LU N/A N/A A0A0N9XAG5 N/A
    1031867 9nk4:A (1.27) BS01 FMN N/A N/A A0A0N9XAG5 N/A
    1031868 9nk6:B (2.88) BS01 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031869 9nk6:B (2.88) BS02 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031870 9nk6:B (2.88) BS03 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031871 9nk6:B (2.88) BS04 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031872 9nk6:B (2.88) BS05 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031873 9nk6:B (2.88) BS06 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031874 9nk6:C (2.88) BS01 ERG N/A GO:0001401 ... G2Q6R7 41266328
    1031875 9nk7:A (2.84) BS01 ERG N/A GO:0001401 ... G2QAT9 41266328
    1031876 9nk7:B (2.84) BS01 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031877 9nk7:B (2.84) BS02 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031878 9nk7:B (2.84) BS03 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031879 9nk7:B (2.84) BS04 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031880 9nk7:B (2.84) BS05 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031881 9nk7:B (2.84) BS06 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031882 9nk7:C (2.84) BS01 ERG N/A GO:0001401 ... G2Q6R7 41266328
    1031883 9nk8:B (3.0) BS01 peptide N/A GO:0005741 ... G2QFF9 41266328
    1031884 9nk8:B (3.0) BS02 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031885 9nk8:B (3.0) BS03 ERG N/A GO:0005741 ... G2QFF9 41266328
    1031886 9nk8:C (3.0) BS01 ERG N/A GO:0001401 ... G2Q6R7 41266328
    1031887 9nk9:A (2.1) BS01 peptide N/A N/A N/A 40409557
    1031888 9nkb:A (3.5) BS01 A1BYV N/A GO:0003824 ... Q92410 40852984
    1031889 9nkb:B (3.5) BS01 A1BYV N/A GO:0003824 ... Q92410 40852984
    1031890 9nkc:A (2.5) BS01 dna N/A GO:0000287 ... Q97W02 41002026
    1031891 9nkc:A (2.5) BS02 dna N/A GO:0000287 ... Q97W02 41002026
    1031892 9nkc:A (2.5) BS03 CA N/A GO:0000287 ... Q97W02 41002026
    1031893 9nkc:A (2.5) BS04 CA N/A GO:0000287 ... Q97W02 41002026
    1031894 9nkc:A (2.5) BS05 DTP N/A GO:0000287 ... Q97W02 41002026
    1031895 9nkd:A (2.5) BS01 dna N/A GO:0000287 ... Q97W02 41002026
    1031896 9nkd:A (2.5) BS02 dna N/A GO:0000287 ... Q97W02 41002026
    1031897 9nkd:A (2.5) BS03 DTP N/A GO:0000287 ... Q97W02 41002026
    1031898 9nkd:A (2.5) BS04 CA N/A GO:0000287 ... Q97W02 41002026
    1031899 9nkd:A (2.5) BS05 PO4 N/A GO:0000287 ... Q97W02 41002026
    1031900 9nke:A (2.9) BS01 dna N/A GO:0000287 ... Q97W02 41002026
    1031901 9nke:A (2.9) BS02 dna N/A GO:0000287 ... Q97W02 41002026
    1031902 9nke:A (2.9) BS03 DTP N/A GO:0000287 ... Q97W02 41002026
    1031903 9nke:A (2.9) BS04 CA N/A GO:0000287 ... Q97W02 41002026
    1031904 9nke:A (2.9) BS05 CA N/A GO:0000287 ... Q97W02 41002026
    1031905 9nke:A (2.9) BS06 PO4 N/A GO:0000287 ... Q97W02 41002026
    1031906 9nke:B (2.9) BS01 dna N/A GO:0000287 ... Q97W02 41002026
    1031907 9nke:B (2.9) BS02 dna N/A GO:0000287 ... Q97W02 41002026
    1031908 9nke:B (2.9) BS03 DTP N/A GO:0000287 ... Q97W02 41002026
    1031909 9nke:B (2.9) BS04 CA N/A GO:0000287 ... Q97W02 41002026
    1031910 9nkf:A (2.9) BS01 ATP N/A GO:0000502 ... P35998 40339123
    1031911 9nkf:A (2.9) BS02 MG N/A GO:0000502 ... P35998 40339123
    1031912 9nkf:A (2.9) BS03 MG N/A GO:0000502 ... P35998 40339123
    1031913 9nkf:B (2.9) BS01 ATP N/A GO:0000502 ... P62191 40339123
    1031914 9nkf:B (2.9) BS02 ATP N/A GO:0000502 ... P62191 40339123
    1031915 9nkf:C (2.9) BS01 ADP N/A GO:0000502 ... P62195 40339123
    1031916 9nkf:D (2.9) BS01 ATP N/A GO:0000502 ... P43686 40339123
    1031917 9nkf:E (2.9) BS01 MG N/A GO:0005524 ... A0A087X2I1 40339123
    1031918 9nkf:E (2.9) BS02 ATP N/A GO:0005524 ... A0A087X2I1 40339123
    1031919 9nkf:F (2.9) BS01 ATP N/A GO:0000502 ... P17980 40339123
    1031920 9nkf:F (2.9) BS02 ADP N/A GO:0000502 ... P17980 40339123
    1031921 9nkf:N (2.9) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031922 9nkf:O (2.9) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031923 9nkf:O (2.9) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031924 9nkf:R (2.9) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031925 9nkf:S (2.9) BS01 LDZ N/A GO:0000502 ... P20618 40339123
    1031926 9nkf:c (2.9) BS01 ZN N/A GO:0000502 ... O00487 40339123
    1031927 9nkf:n (2.9) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031928 9nkf:o (2.9) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031929 9nkf:o (2.9) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031930 9nkf:r (2.9) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031931 9nkg:A (2.8) BS01 peptide N/A GO:0000502 ... P35998 40339123
    1031932 9nkg:A (2.8) BS02 ATP N/A GO:0000502 ... P35998 40339123
    1031933 9nkg:A (2.8) BS03 ATP N/A GO:0000502 ... P35998 40339123
    1031934 9nkg:B (2.8) BS01 ATP N/A GO:0000502 ... P62191 40339123
    1031935 9nkg:B (2.8) BS02 ATP N/A GO:0000502 ... P62191 40339123
    1031936 9nkg:B (2.8) BS03 MG N/A GO:0000502 ... P62191 40339123
    1031937 9nkg:D (2.8) BS01 peptide N/A GO:0000502 ... P43686 40339123
    1031938 9nkg:D (2.8) BS02 ATP N/A GO:0000502 ... P43686 40339123
    1031939 9nkg:E (2.8) BS01 peptide N/A GO:0005524 ... A0A087X2I1 40339123
    1031940 9nkg:E (2.8) BS02 ATP N/A GO:0005524 ... A0A087X2I1 40339123
    1031941 9nkg:E (2.8) BS03 ADP N/A GO:0005524 ... A0A087X2I1 40339123
    1031942 9nkg:F (2.8) BS01 ATP N/A GO:0000502 ... P17980 40339123
    1031943 9nkg:N (2.8) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031944 9nkg:O (2.8) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031945 9nkg:O (2.8) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031946 9nkg:R (2.8) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031947 9nkg:S (2.8) BS01 LDZ N/A GO:0000502 ... P20618 40339123
    1031948 9nkg:c (2.8) BS01 ZN N/A GO:0000502 ... O00487 40339123
    1031949 9nkg:n (2.8) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031950 9nkg:o (2.8) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031951 9nkg:o (2.8) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031952 9nkg:r (2.8) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031953 9nkh:A (1.94) BS01 peptide N/A GO:0000139 ... A0A3G6II09 N/A
    1031954 9nkh:D (1.94) BS01 peptide N/A GO:0000139 ... A0A3G6II09 N/A
    1031955 9nki:A (2.94) BS01 peptide N/A GO:0000502 ... P35998 40339123
    1031956 9nki:A (2.94) BS02 ATP N/A GO:0000502 ... P35998 40339123
    1031957 9nki:A (2.94) BS03 ATP N/A GO:0000502 ... P35998 40339123
    1031958 9nki:B (2.94) BS01 ATP N/A GO:0000502 ... P62191 40339123
    1031959 9nki:D (2.94) BS01 ATP N/A GO:0000502 ... P43686 40339123
    1031960 9nki:E (2.94) BS01 peptide N/A GO:0005524 ... A0A087X2I1 40339123
    1031961 9nki:E (2.94) BS02 ADP N/A GO:0005524 ... A0A087X2I1 40339123
    1031962 9nki:F (2.94) BS01 peptide N/A GO:0000502 ... P17980 40339123
    1031963 9nki:F (2.94) BS02 ATP N/A GO:0000502 ... P17980 40339123
    1031964 9nki:c (2.94) BS01 ZN N/A GO:0000502 ... O00487 40339123
    1031965 9nkj:A (3.84) BS01 ATP N/A GO:0000502 ... P35998 40339123
    1031966 9nkj:A (3.84) BS02 ATP N/A GO:0000502 ... P35998 40339123
    1031967 9nkj:B (3.84) BS01 ATP N/A GO:0000502 ... P62191 40339123
    1031968 9nkj:B (3.84) BS02 ATP N/A GO:0000502 ... P62191 40339123
    1031969 9nkj:C (3.84) BS01 peptide N/A GO:0000502 ... P62195 40339123
    1031970 9nkj:C (3.84) BS02 ATP N/A GO:0000502 ... P62195 40339123
    1031971 9nkj:C (3.84) BS03 ATP N/A GO:0000502 ... P62195 40339123
    1031972 9nkj:D (3.84) BS01 ADP N/A GO:0000502 ... P43686 40339123
    1031973 9nkj:F (3.84) BS01 ATP N/A GO:0000502 ... P17980 40339123
    1031974 9nkj:N (3.84) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031975 9nkj:O (3.84) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031976 9nkj:O (3.84) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031977 9nkj:R (3.84) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031978 9nkj:S (3.84) BS01 LDZ N/A GO:0000502 ... P20618 40339123
    1031979 9nkj:c (3.84) BS01 ZN N/A GO:0000502 ... O00487 40339123
    1031980 9nkj:n (3.84) BS01 LDZ N/A GO:0000502 ... P28072 40339123
    1031981 9nkj:o (3.84) BS01 LDZ N/A GO:0000502 ... Q99436 40339123
    1031982 9nkj:o (3.84) BS02 LDZ N/A GO:0000502 ... Q99436 40339123
    1031983 9nkj:r (3.84) BS01 LDZ N/A GO:0000502 ... P28074 40339123
    1031984 9nkk:A (1.44) BS01 ZN N/A GO:0004022 ... P00327 N/A
    1031985 9nkk:A (1.44) BS02 ZN N/A GO:0004022 ... P00327 N/A
    1031986 9nkk:A (1.44) BS03 NAI N/A GO:0004022 ... P00327 N/A
    1031987 9nkk:A (1.44) BS04 CXF N/A GO:0004022 ... P00327 N/A
    1031988 9nkk:B (1.44) BS01 ZN N/A GO:0004022 ... P00327 N/A
    1031989 9nkk:B (1.44) BS02 ZN N/A GO:0004022 ... P00327 N/A
    1031990 9nkk:B (1.44) BS03 NAI N/A GO:0004022 ... P00327 N/A
    1031991 9nkk:B (1.44) BS04 CXF N/A GO:0004022 ... P00327 N/A
    1031992 9nkl:13 (3.3) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    1031993 9nkl:14 (3.3) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    1031994 9nkl:14 (3.3) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    1031995 9nkl:15 (3.3) BS01 rna N/A GO:0002181 ... P02413 N/A
    1031996 9nkl:16 (3.3) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    1031997 9nkl:16 (3.3) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    1031998 9nkl:17 (3.3) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    1031999 9nkl:18 (3.3) BS01 rna N/A GO:0002181 ... P0C018 N/A
    1032000 9nkl:18 (3.3) BS02 rna N/A GO:0002181 ... P0C018 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).