SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1033601 9ns9:R (3.3) BS01 9UJ N/A GO:0002232 ... O15552 40533560
    1033602 9ns9:R (3.3) BS02 A1AZC N/A GO:0002232 ... O15552 40533560
    1033603 9nsb:A (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033604 9nsb:B (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033605 9nsb:C (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033606 9nsb:D (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033607 9nsb:E (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033608 9nsb:F (2.5) BS01 CJA N/A GO:0006470 ... Q9Y6W6 N/A
    1033609 9nsc:A (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033610 9nsc:A (3.1) BS02 TRP N/A N/A E4NIM4 40271149
    1033611 9nsc:B (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033612 9nsc:B (3.1) BS02 TRP N/A N/A E4NIM4 40271149
    1033613 9nsc:C (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033614 9nsc:C (3.1) BS02 TRP N/A N/A E4NIM4 40271149
    1033615 9nsc:D (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033616 9nsc:D (3.1) BS02 TRP N/A N/A E4NIM4 40271149
    1033617 9nsc:E (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033618 9nsc:E (3.1) BS02 TRP N/A N/A E4NIM4 40271149
    1033619 9nsc:F (3.1) BS01 TRP N/A N/A E4NIM4 40271149
    1033620 9nsd:A (3.14) BS01 peptide N/A N/A A0A565A192 41587959
    1033621 9nsd:B (3.14) BS01 peptide N/A N/A A0A565A192 41587959
    1033622 9nsd:B (3.14) BS02 peptide N/A N/A A0A565A192 41587959
    1033623 9nsd:D (3.14) BS01 peptide N/A N/A A0A565A192 41587959
    1033624 9nse:A (2.24) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11051558
    1033625 9nse:A (2.24) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11051558
    1033626 9nse:A (2.24) BS03 H4B 1.14.13.39 GO:0004517 ... P29473 11051558
    1033627 9nse:A (2.24) BS04 ISU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.039uM
    1033628 9nse:A (2.24) BS05 H4B 1.14.13.39 GO:0004517 ... P29473 11051558
    1033629 9nse:B (2.24) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11051558
    1033630 9nse:B (2.24) BS02 H4B 1.14.13.39 GO:0004517 ... P29473 11051558
    1033631 9nse:B (2.24) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 11051558
    1033632 9nse:B (2.24) BS04 H4B 1.14.13.39 GO:0004517 ... P29473 11051558
    1033633 9nse:B (2.24) BS05 ISU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.039uM
    1033634 9nse:B (2.24) BS06 ISU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.039uM
    1033635 9nsj:A (1.33) BS01 MN N/A GO:0000303 ... P04179 41128288
    1033636 9nsj:B (1.33) BS01 MN N/A GO:0000303 ... P04179 41128288
    1033637 9nsk:A (1.9) BS01 A1B20 N/A GO:0008233 ... P0DTD1 40437897
    1033638 9nsl:A (2.0) BS01 A1B21 N/A GO:0008233 ... P0DTD1 40437897
    1033639 9nsn:A (1.85) BS01 A1B0X N/A N/A P61964 N/A
    1033640 9nsn:B (1.85) BS01 A1B0X N/A N/A Q9Y4B6 N/A
    1033641 9nso:A (1.85) BS01 A1B0Y N/A N/A P61964 N/A
    1033642 9nso:B (1.85) BS01 A1B0Y N/A N/A Q9Y4B6 N/A
    1033643 9nsr:A (3.25) BS01 A1B0W N/A GO:0004161 ... Q8II79 N/A
    1033644 9nss:A (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033645 9nss:B (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033646 9nss:C (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033647 9nss:C (2.68) BS02 TRP N/A N/A E4NIM4 40271149
    1033648 9nss:D (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033649 9nss:D (2.68) BS02 TRP N/A N/A E4NIM4 40271149
    1033650 9nss:E (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033651 9nss:E (2.68) BS02 TRP N/A N/A E4NIM4 40271149
    1033652 9nss:F (2.68) BS01 TRP N/A N/A E4NIM4 40271149
    1033653 9nst:A (3.3) BS01 A1L46 N/A N/A E4NIM4 40271149
    1033654 9nst:B (3.3) BS01 A1L46 N/A N/A E4NIM4 40271149
    1033655 9nst:B (3.3) BS02 A1L46 N/A N/A E4NIM4 40271149
    1033656 9nst:C (3.3) BS01 A1L46 N/A N/A E4NIM4 40271149
    1033657 9nst:C (3.3) BS02 A1L46 N/A N/A E4NIM4 40271149
    1033658 9nst:D (3.3) BS01 A1L46 N/A N/A E4NIM4 40271149
    1033659 9nst:D (3.3) BS02 A1L46 N/A N/A E4NIM4 40271149
    1033660 9nsu:A (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033661 9nsu:A (2.87) BS02 A1B1P N/A N/A E4NIM4 40271149
    1033662 9nsu:B (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033663 9nsu:C (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033664 9nsu:D (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033665 9nsu:E (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033666 9nsu:E (2.87) BS02 A1B1P N/A N/A E4NIM4 40271149
    1033667 9nsu:F (2.87) BS01 A1B1P N/A N/A E4NIM4 40271149
    1033668 9nsu:F (2.87) BS02 A1B1P N/A N/A E4NIM4 40271149
    1033669 9nsv:A (2.19) BS01 ICS N/A GO:0009399 ... C1DGZ7 40664216
    1033670 9nsv:A (2.19) BS02 CLF N/A GO:0009399 ... C1DGZ7 40664216
    1033671 9nsv:B (2.19) BS01 CLF N/A GO:0009399 ... C1DGZ8 40664216
    1033672 9nsv:B (2.19) BS02 FE N/A GO:0009399 ... C1DGZ8 40664216
    1033673 9nsv:B (2.19) BS03 FE N/A GO:0009399 ... C1DGZ8 40664216
    1033674 9nsv:C (2.19) BS01 ICS N/A GO:0009399 ... C1DGZ7 40664216
    1033675 9nsv:C (2.19) BS02 CLF N/A GO:0009399 ... C1DGZ7 40664216
    1033676 9nsv:D (2.19) BS01 FE N/A GO:0009399 ... C1DGZ8 40664216
    1033677 9nsv:D (2.19) BS02 FE N/A GO:0009399 ... C1DGZ8 40664216
    1033678 9nsv:D (2.19) BS03 CLF N/A GO:0009399 ... C1DGZ8 40664216
    1033679 9nsx:A (1.57) BS01 Y33 N/A GO:0008658 ... Q9L4P2 40833279
    1033680 9nsy:A (1.7) BS01 Y33 N/A GO:0008658 ... Q9L4P2 40833279
    1033681 9nsz:A (1.8) BS01 Y33 N/A GO:0008658 ... Q9L4P2 40833279
    1033682 9nt0:A (1.6) BS01 MER N/A GO:0008658 ... Q9L4P2 40833279
    1033683 9nt4:A (2.4) BS01 FCB N/A N/A N/A N/A
    1033684 9nt4:B (2.4) BS01 FCB N/A N/A N/A N/A
    1033685 9nt4:C (2.4) BS01 FCB N/A N/A N/A N/A
    1033686 9nt4:D (2.4) BS01 FCB N/A N/A N/A N/A
    1033687 9nt4:E (2.4) BS01 FCB N/A N/A N/A N/A
    1033688 9nt4:F (2.4) BS01 FCB N/A N/A N/A N/A
    1033689 9nt4:G (2.4) BS01 FCB N/A N/A N/A N/A
    1033690 9nt4:H (2.4) BS01 FCB N/A N/A N/A N/A
    1033691 9nt6:A (1.5) BS01 MBG N/A N/A B8LFD5 N/A
    1033692 9nt6:B (1.5) BS01 MBG N/A N/A B8LFD5 N/A
    1033693 9nta:BC (2.38) BS01 rna N/A GO:0002181 ... Q8TRU4 40914243
    1033694 9nta:BD (2.38) BS01 rna N/A GO:0003723 ... Q8TRU7 40914243
    1033695 9nta:BE (2.38) BS01 rna N/A GO:0003723 ... Q8TRU6 40914243
    1033696 9nta:BF (2.38) BS01 rna N/A GO:0000049 ... Q8TRT4 40914243
    1033697 9nta:BF (2.38) BS02 rna N/A GO:0000049 ... Q8TRT4 40914243
    1033698 9nta:BG (2.38) BS01 rna N/A GO:0002181 ... Q8TRT1 40914243
    1033699 9nta:BH (2.38) BS01 rna N/A GO:0001682 ... Q8TQL9 40914243
    1033700 9nta:BI (2.38) BS01 rna N/A GO:0003735 ... Q8TU90 40914243
    1033701 9nta:BI (2.38) BS02 rna N/A GO:0003735 ... Q8TU90 40914243
    1033702 9nta:BJ (2.38) BS01 rna N/A GO:0003729 ... Q8TT43 40914243
    1033703 9nta:BK (2.38) BS01 rna N/A GO:0003735 ... Q8TRT7 40914243
    1033704 9nta:BL (2.38) BS01 rna N/A GO:0003735 ... Q8TRS5 40914243
    1033705 9nta:BM (2.38) BS01 rna N/A GO:0002181 ... Q8TPX0 40914243
    1033706 9nta:BN (2.38) BS01 rna N/A GO:0000027 ... Q8TRS8 40914243
    1033707 9nta:BN (2.38) BS02 rna N/A GO:0000027 ... Q8TRS8 40914243
    1033708 9nta:BO (2.38) BS01 rna N/A GO:0002181 ... Q8TT44 40914243
    1033709 9nta:BP (2.38) BS01 rna N/A GO:0003723 ... A0A832W9G6 40914243
    1033710 9nta:BQ (2.38) BS01 rna N/A GO:0003735 ... Q8TIN5 40914243
    1033711 9nta:BR (2.38) BS01 rna N/A GO:0003735 ... Q8TQU3 40914243
    1033712 9nta:BR (2.38) BS02 rna N/A GO:0003735 ... Q8TQU3 40914243
    1033713 9nta:BS (2.38) BS01 rna N/A GO:0002181 ... Q8TRU2 40914243
    1033714 9nta:BT (2.38) BS01 rna N/A GO:0003735 ... Q8TRU5 40914243
    1033715 9nta:BU (2.38) BS01 rna N/A GO:0002181 ... Q8TRT6 40914243
    1033716 9nta:BV (2.38) BS01 rna N/A GO:0003735 ... Q8TQL7 40914243
    1033717 9nta:BV (2.38) BS02 ZN N/A GO:0003735 ... Q8TQL7 40914243
    1033718 9nta:BW (2.38) BS01 rna N/A GO:0003735 ... Q8TRU0 40914243
    1033719 9nta:BX (2.38) BS01 rna N/A GO:0000463 ... Q8TRS6 40914243
    1033720 9nta:BX (2.38) BS02 rna N/A GO:0000463 ... Q8TRS6 40914243
    1033721 9nta:BY (2.38) BS01 rna N/A GO:0003723 ... Q8TRB9 40914243
    1033722 9nta:BZ (2.38) BS01 rna N/A GO:0002181 ... Q8TIN3 40914243
    1033723 9nta:Ba (2.38) BS01 rna N/A GO:0003735 ... A0A832W8Z7 40914243
    1033724 9nta:Bb (2.38) BS01 rna N/A GO:0003735 ... A0A832SMV9 40914243
    1033725 9nta:Bb (2.38) BS02 ZN N/A GO:0003735 ... A0A832SMV9 40914243
    1033726 9nta:Bc (2.38) BS01 rna N/A GO:0003735 ... Q8TL48 40914243
    1033727 9nta:Bc (2.38) BS02 ZN N/A GO:0003735 ... Q8TL48 40914243
    1033728 9nta:Bd (2.38) BS01 rna N/A GO:0002181 ... Q8TIN2 40914243
    1033729 9nta:Be (2.38) BS01 rna N/A GO:0003735 ... Q8TJ19 40914243
    1033730 9nta:Be (2.38) BS02 ZN N/A GO:0003735 ... Q8TJ19 40914243
    1033731 9nta:Bf (2.38) BS01 rna N/A GO:0003735 ... A0A832W9V9 40914243
    1033732 9nta:Bf (2.38) BS02 ZN N/A GO:0003735 ... A0A832W9V9 40914243
    1033733 9ntb:A (1.8) BS01 A1B1V N/A GO:0004407 ... Q92769 40882030
    1033734 9ntb:A (1.8) BS02 ZN N/A GO:0004407 ... Q92769 40882030
    1033735 9ntb:A (1.8) BS03 CA N/A GO:0004407 ... Q92769 40882030
    1033736 9ntb:A (1.8) BS04 CA N/A GO:0004407 ... Q92769 40882030
    1033737 9ntb:B (1.8) BS01 A1B1V N/A GO:0004407 ... Q92769 40882030
    1033738 9ntb:B (1.8) BS02 ZN N/A GO:0004407 ... Q92769 40882030
    1033739 9ntb:B (1.8) BS03 CA N/A GO:0004407 ... Q92769 40882030
    1033740 9ntb:B (1.8) BS04 CA N/A GO:0004407 ... Q92769 40882030
    1033741 9ntb:C (1.8) BS01 A1B1V N/A GO:0004407 ... Q92769 40882030
    1033742 9ntb:C (1.8) BS02 ZN N/A GO:0004407 ... Q92769 40882030
    1033743 9ntb:C (1.8) BS03 CA N/A GO:0004407 ... Q92769 40882030
    1033744 9ntb:C (1.8) BS04 CA N/A GO:0004407 ... Q92769 40882030
    1033745 9ntc:A (3.05) BS01 A1B1J N/A GO:0005783 ... Q7L0J3 40892927
    1033746 9ntc:A (3.05) BS02 VLX N/A GO:0005783 ... Q7L0J3 40892927
    1033747 9ntc:A (3.05) BS03 CLR N/A GO:0005783 ... Q7L0J3 40892927
    1033748 9ntc:A (3.05) BS04 A1B1I N/A GO:0005783 ... Q7L0J3 40892927
    1033749 9nte:A (1.75) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033750 9nte:B (1.75) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033751 9nte:C (1.75) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033752 9nte:D (1.75) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033753 9ntf:A (1.56) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033754 9ntf:B (1.56) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033755 9ntf:C (1.56) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033756 9ntf:D (1.56) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033757 9ntg:A (1.63) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033758 9ntg:A (1.63) BS02 DCF N/A GO:0004000 ... N/A 40505866
    1033759 9ntg:B (1.63) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033760 9ntg:B (1.63) BS02 DCF N/A GO:0004000 ... N/A 40505866
    1033761 9ntg:C (1.63) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033762 9ntg:C (1.63) BS02 DCF N/A GO:0004000 ... N/A 40505866
    1033763 9ntg:D (1.63) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033764 9ntg:D (1.63) BS02 DCF N/A GO:0004000 ... N/A 40505866
    1033765 9nth:A (1.61) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033766 9nth:A (1.61) BS02 A1CDW N/A GO:0004000 ... N/A 40505866
    1033767 9nth:B (1.61) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033768 9nth:B (1.61) BS02 A1CDW N/A GO:0004000 ... N/A 40505866
    1033769 9nth:C (1.61) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033770 9nth:C (1.61) BS02 A1CDW N/A GO:0004000 ... N/A 40505866
    1033771 9nth:D (1.61) BS01 ZN N/A GO:0004000 ... N/A 40505866
    1033772 9nth:D (1.61) BS02 A1CDW N/A GO:0004000 ... N/A 40505866
    1033773 9nti:A (3.0) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033774 9nti:B (3.0) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033775 9ntj:A (3.28) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033776 9ntj:A (3.28) BS02 DCF N/A GO:0004000 ... P15287 40505866
    1033777 9ntj:B (3.28) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033778 9ntj:B (3.28) BS02 DCF N/A GO:0004000 ... P15287 40505866
    1033779 9ntk:A (2.53) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033780 9ntk:A (2.53) BS02 A1CDW N/A GO:0004000 ... P15287 40505866
    1033781 9ntk:B (2.53) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033782 9ntk:B (2.53) BS02 A1CDW N/A GO:0004000 ... P15287 40505866
    1033783 9ntk:C (2.53) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033784 9ntk:C (2.53) BS02 A1CDW N/A GO:0004000 ... P15287 40505866
    1033785 9ntk:D (2.53) BS01 ZN N/A GO:0004000 ... P15287 40505866
    1033786 9ntk:D (2.53) BS02 A1CDW N/A GO:0004000 ... P15287 40505866
    1033787 9ntm:AA (7.1) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1033788 9ntm:AB (7.1) BS01 GDP N/A GO:0003924 ... A0A4W2DT89 40651469
    1033789 9ntm:AB (7.1) BS02 TA1 N/A GO:0003924 ... A0A4W2DT89 40651469
    1033790 9ntm:AC (7.1) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1033791 9ntm:AD (7.1) BS01 GDP N/A GO:0003924 ... A0A4W2DT89 40651469
    1033792 9ntm:AD (7.1) BS02 TA1 N/A GO:0003924 ... A0A4W2DT89 40651469
    1033793 9ntm:AE (7.1) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1033794 9ntm:AF (7.1) BS01 GDP N/A GO:0003924 ... A0A4W2DT89 40651469
    1033795 9ntm:AF (7.1) BS02 TA1 N/A GO:0003924 ... A0A4W2DT89 40651469
    1033796 9ntm:BA (7.1) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1033797 9ntm:BB (7.1) BS01 GDP N/A GO:0003924 ... A0A4W2DT89 40651469
    1033798 9ntm:BB (7.1) BS02 TA1 N/A GO:0003924 ... A0A4W2DT89 40651469
    1033799 9ntm:BC (7.1) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1033800 9ntm:BD (7.1) BS01 GDP N/A GO:0003924 ... A0A4W2DT89 40651469

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).