SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5167 5168 5169 5170 5171 5172 5173 5174 5175 5176 5177 5178 5179 5180 5181 5182 5183 5184 5185 5186 5187 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1035201 9o2y:I (2.14) BS01 rna N/A N/A N/A 41757712
    1035202 9o2y:I (2.14) BS02 rna N/A N/A N/A 41757712
    1035203 9o2y:J (2.14) BS01 rna N/A N/A N/A 41757712
    1035204 9o2y:K (2.14) BS01 rna N/A N/A N/A 41757712
    1035205 9o2y:L (2.14) BS01 rna N/A N/A N/A 41757712
    1035206 9o2y:M (2.14) BS01 rna N/A N/A N/A 41757712
    1035207 9o2y:M (2.14) BS02 rna N/A N/A N/A 41757712
    1035208 9o2y:N (2.14) BS01 rna N/A N/A N/A 41757712
    1035209 9o2y:O (2.14) BS01 rna N/A N/A N/A 41757712
    1035210 9o2y:O (2.14) BS02 rna N/A N/A N/A 41757712
    1035211 9o2y:P (2.14) BS01 rna N/A N/A N/A 41757712
    1035212 9o2y:Q (2.14) BS01 rna N/A N/A N/A 41757712
    1035213 9o2y:Q (2.14) BS02 MG N/A N/A N/A 41757712
    1035214 9o2y:R (2.14) BS01 rna N/A N/A N/A 41757712
    1035215 9o2y:S (2.14) BS01 rna N/A N/A N/A 41757712
    1035216 9o2y:T (2.14) BS01 rna N/A N/A N/A 41757712
    1035217 9o2y:U (2.14) BS01 rna N/A N/A N/A 41757712
    1035218 9o2y:c (2.14) BS01 rna N/A N/A N/A 41757712
    1035219 9o2y:d (2.14) BS01 rna N/A N/A N/A 41757712
    1035220 9o2y:e (2.14) BS01 rna N/A N/A N/A 41757712
    1035221 9o2y:f (2.14) BS01 rna N/A N/A N/A 41757712
    1035222 9o2y:f (2.14) BS02 rna N/A N/A N/A 41757712
    1035223 9o2y:f (2.14) BS03 rna N/A N/A N/A 41757712
    1035224 9o2y:g (2.14) BS01 rna N/A N/A N/A 41757712
    1035225 9o2y:h (2.14) BS01 rna N/A N/A N/A 41757712
    1035226 9o2y:i (2.14) BS01 rna N/A N/A N/A 41757712
    1035227 9o2y:j (2.14) BS01 rna N/A N/A N/A 41757712
    1035228 9o2y:j (2.14) BS02 rna N/A N/A N/A 41757712
    1035229 9o2y:k (2.14) BS01 rna N/A N/A N/A 41757712
    1035230 9o2y:l (2.14) BS01 rna N/A N/A N/A 41757712
    1035231 9o2y:l (2.14) BS02 rna N/A N/A N/A 41757712
    1035232 9o2y:l (2.14) BS03 rna N/A N/A N/A 41757712
    1035233 9o2y:m (2.14) BS01 rna N/A N/A N/A 41757712
    1035234 9o2y:n (2.14) BS01 rna N/A N/A N/A 41757712
    1035235 9o2y:n (2.14) BS02 rna N/A N/A N/A 41757712
    1035236 9o2y:o (2.14) BS01 rna N/A N/A N/A 41757712
    1035237 9o2y:o (2.14) BS02 rna N/A N/A N/A 41757712
    1035238 9o2y:p (2.14) BS01 rna N/A N/A N/A 41757712
    1035239 9o2y:q (2.14) BS01 rna N/A N/A N/A 41757712
    1035240 9o2y:r (2.14) BS01 rna N/A N/A N/A 41757712
    1035241 9o2y:s (2.14) BS01 rna N/A N/A N/A 41757712
    1035242 9o2y:t (2.14) BS01 rna N/A N/A N/A 41757712
    1035243 9o2y:u (2.14) BS01 rna N/A N/A N/A 41757712
    1035244 9o2y:v (2.14) BS01 rna N/A N/A N/A 41757712
    1035245 9o2y:v (2.14) BS02 rna N/A N/A N/A 41757712
    1035246 9o2y:w (2.14) BS01 rna N/A N/A N/A 41757712
    1035247 9o2y:x (2.14) BS01 rna N/A N/A N/A 41757712
    1035248 9o2y:y (2.14) BS01 rna N/A N/A N/A 41757712
    1035249 9o2y:y (2.14) BS02 rna N/A N/A N/A 41757712
    1035250 9o2y:z (2.14) BS01 rna N/A N/A N/A 41757712
    1035251 9o2z:A (3.83) BS01 ZN N/A GO:0000165 ... P15056 N/A
    1035252 9o2z:A (3.83) BS02 ZN N/A GO:0000165 ... P15056 N/A
    1035253 9o2z:B (3.83) BS01 CHU N/A GO:0000165 ... Q02750 N/A
    1035254 9o35:A (2.19) BS01 HEM N/A GO:0005737 ... Q9ZAU3 41639599
    1035255 9o35:A (2.19) BS02 DM1 N/A GO:0005737 ... Q9ZAU3 41639599
    1035256 9o35:B (2.19) BS01 HEM N/A GO:0005737 ... Q9ZAU3 41639599
    1035257 9o35:B (2.19) BS02 DM1 N/A GO:0005737 ... Q9ZAU3 41639599
    1035258 9o3b:A (2.416) BS01 FBP N/A GO:0000287 ... P14618 40742037
    1035259 9o3b:A (2.416) BS02 OXL N/A GO:0000287 ... P14618 40742037
    1035260 9o3b:A (2.416) BS03 MG N/A GO:0000287 ... P14618 40742037
    1035261 9o3b:A (2.416) BS04 A1B77 N/A GO:0000287 ... P14618 40742037
    1035262 9o3b:B (2.416) BS01 A1B77 N/A GO:0000287 ... P14618 40742037
    1035263 9o3b:B (2.416) BS02 FBP N/A GO:0000287 ... P14618 40742037
    1035264 9o3b:B (2.416) BS03 MG N/A GO:0000287 ... P14618 40742037
    1035265 9o3b:C (2.416) BS01 OXL N/A GO:0000287 ... P14618 40742037
    1035266 9o3b:C (2.416) BS02 A1B77 N/A GO:0000287 ... P14618 40742037
    1035267 9o3b:C (2.416) BS03 MG N/A GO:0000287 ... P14618 40742037
    1035268 9o3b:D (2.416) BS01 A1B77 N/A GO:0000287 ... P14618 40742037
    1035269 9o3b:D (2.416) BS02 MG N/A GO:0000287 ... P14618 40742037
    1035270 9o3b:E (2.416) BS01 FBP N/A GO:0000287 ... P14618 40742037
    1035271 9o3b:E (2.416) BS02 MG N/A GO:0000287 ... P14618 40742037
    1035272 9o3b:E (2.416) BS03 A1B77 N/A GO:0000287 ... P14618 40742037
    1035273 9o3b:F (2.416) BS01 A1B77 N/A GO:0000287 ... P14618 40742037
    1035274 9o3b:F (2.416) BS02 FBP N/A GO:0000287 ... P14618 40742037
    1035275 9o3b:F (2.416) BS03 OXL N/A GO:0000287 ... P14618 40742037
    1035276 9o3b:F (2.416) BS04 MG N/A GO:0000287 ... P14618 40742037
    1035277 9o3b:G (2.416) BS01 MG N/A GO:0000287 ... P14618 40742037
    1035278 9o3b:G (2.416) BS02 A1B77 N/A GO:0000287 ... P14618 40742037
    1035279 9o3b:H (2.416) BS01 OXL N/A GO:0000287 ... P14618 40742037
    1035280 9o3b:H (2.416) BS02 A1B77 N/A GO:0000287 ... P14618 40742037
    1035281 9o3b:H (2.416) BS03 MG N/A GO:0000287 ... P14618 40742037
    1035282 9o3d:L (2.68) BS01 MAN N/A N/A N/A 41633361
    1035283 9o3e:L (2.79) BS01 A1B74 N/A GO:0004298 ... Q8IJT1 41148577
    1035284 9o3e:M (2.79) BS01 A1B74 N/A GO:0005634 ... A0A5K1K7U1 41148577
    1035285 9o3e:Z (2.79) BS01 A1B74 N/A GO:0004298 ... Q8IJT1 41148577
    1035286 9o3e:a (2.79) BS01 A1B74 N/A GO:0005634 ... A0A5K1K7U1 41148577
    1035287 9o3f:L (2.28) BS01 A1B73 N/A GO:0004298 ... Q8IJT1 41148577
    1035288 9o3f:M (2.28) BS01 A1B73 N/A GO:0005634 ... A0A5K1K7U1 41148577
    1035289 9o3f:Z (2.28) BS01 A1B73 N/A GO:0004298 ... Q8IJT1 41148577
    1035290 9o3f:a (2.28) BS01 A1B73 N/A GO:0005634 ... A0A5K1K7U1 41148577
    1035291 9o3h:10 (2.65) BS01 rna N/A GO:0003735 ... P60493 40502108
    1035292 9o3h:10 (2.65) BS02 rna N/A GO:0003735 ... P60493 40502108
    1035293 9o3h:10 (2.65) BS03 MG N/A GO:0003735 ... P60493 40502108
    1035294 9o3h:10 (2.65) BS04 MG N/A GO:0003735 ... P60493 40502108
    1035295 9o3h:10 (2.65) BS05 MG N/A GO:0003735 ... P60493 40502108
    1035296 9o3h:11 (2.65) BS01 rna N/A GO:0003735 ... P60494 40502108
    1035297 9o3h:11 (2.65) BS02 rna N/A GO:0003735 ... P60494 40502108
    1035298 9o3h:11 (2.65) BS03 MG N/A GO:0003735 ... P60494 40502108
    1035299 9o3h:12 (2.65) BS01 rna N/A GO:0003735 ... Q5SHP6 40502108
    1035300 9o3h:13 (2.65) BS01 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035301 9o3h:13 (2.65) BS02 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035302 9o3h:13 (2.65) BS03 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1035303 9o3h:13 (2.65) BS04 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1035304 9o3h:13 (2.65) BS05 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1035305 9o3h:14 (2.65) BS01 rna N/A GO:0003735 ... Q5SJE1 40502108
    1035306 9o3h:14 (2.65) BS02 ZN N/A GO:0003735 ... Q5SJE1 40502108
    1035307 9o3h:15 (2.65) BS01 rna N/A GO:0003735 ... P80339 40502108
    1035308 9o3h:15 (2.65) BS02 MG N/A GO:0003735 ... P80339 40502108
    1035309 9o3h:15 (2.65) BS03 MG N/A GO:0003735 ... P80339 40502108
    1035310 9o3h:15 (2.65) BS04 MG N/A GO:0003735 ... P80339 40502108
    1035311 9o3h:15 (2.65) BS05 ZN N/A GO:0003735 ... P80339 40502108
    1035312 9o3h:16 (2.65) BS01 rna N/A GO:0003735 ... P35871 40502108
    1035313 9o3h:16 (2.65) BS02 MG N/A GO:0003735 ... P35871 40502108
    1035314 9o3h:16 (2.65) BS03 ZN N/A GO:0003735 ... P35871 40502108
    1035315 9o3h:17 (2.65) BS01 rna N/A GO:0003735 ... P80340 40502108
    1035316 9o3h:17 (2.65) BS02 MG N/A GO:0003735 ... P80340 40502108
    1035317 9o3h:17 (2.65) BS03 MG N/A GO:0003735 ... P80340 40502108
    1035318 9o3h:18 (2.65) BS01 rna N/A GO:0003735 ... Q5SKU1 40502108
    1035319 9o3h:18 (2.65) BS02 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035320 9o3h:18 (2.65) BS03 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035321 9o3h:18 (2.65) BS04 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035322 9o3h:19 (2.65) BS01 rna N/A GO:0003735 ... Q5SHR2 40502108
    1035323 9o3h:19 (2.65) BS02 ZN N/A GO:0003735 ... Q5SHR2 40502108
    1035324 9o3h:1D (2.65) BS01 rna N/A GO:0002181 ... P60405 40502108
    1035325 9o3h:1D (2.65) BS02 rna N/A GO:0002181 ... P60405 40502108
    1035326 9o3h:1D (2.65) BS03 MG N/A GO:0002181 ... P60405 40502108
    1035327 9o3h:1D (2.65) BS04 MG N/A GO:0002181 ... P60405 40502108
    1035328 9o3h:1D (2.65) BS05 MG N/A GO:0002181 ... P60405 40502108
    1035329 9o3h:1D (2.65) BS06 MG N/A GO:0002181 ... P60405 40502108
    1035330 9o3h:1D (2.65) BS07 MG N/A GO:0002181 ... P60405 40502108
    1035331 9o3h:1D (2.65) BS08 MG N/A GO:0002181 ... P60405 40502108
    1035332 9o3h:1D (2.65) BS09 MG N/A GO:0002181 ... P60405 40502108
    1035333 9o3h:1D (2.65) BS10 MG N/A GO:0002181 ... P60405 40502108
    1035334 9o3h:1D (2.65) BS11 MG N/A GO:0002181 ... P60405 40502108
    1035335 9o3h:1D (2.65) BS12 MG N/A GO:0002181 ... P60405 40502108
    1035336 9o3h:1E (2.65) BS01 rna N/A GO:0003735 ... Q5SHN8 40502108
    1035337 9o3h:1E (2.65) BS02 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035338 9o3h:1E (2.65) BS03 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035339 9o3h:1E (2.65) BS04 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035340 9o3h:1F (2.65) BS01 rna N/A GO:0003735 ... Q5SHN9 40502108
    1035341 9o3h:1F (2.65) BS02 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035342 9o3h:1F (2.65) BS03 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035343 9o3h:1F (2.65) BS04 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035344 9o3h:1F (2.65) BS05 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035345 9o3h:1F (2.65) BS06 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035346 9o3h:1F (2.65) BS07 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035347 9o3h:1F (2.65) BS08 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035348 9o3h:1F (2.65) BS09 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035349 9o3h:1F (2.65) BS10 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035350 9o3h:1F (2.65) BS11 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035351 9o3h:1F (2.65) BS12 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035352 9o3h:1G (2.65) BS01 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035353 9o3h:1G (2.65) BS02 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035354 9o3h:1G (2.65) BS03 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035355 9o3h:1G (2.65) BS04 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035356 9o3h:1G (2.65) BS05 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035357 9o3h:1H (2.65) BS01 rna N/A GO:0002181 ... P0DOY8 40502108
    1035358 9o3h:1I (2.65) BS01 rna N/A GO:0003735 ... Q5SLQ1 40502108
    1035359 9o3h:1N (2.65) BS01 rna N/A GO:0003729 ... P60488 40502108
    1035360 9o3h:1N (2.65) BS02 MG N/A GO:0003729 ... P60488 40502108
    1035361 9o3h:1N (2.65) BS03 MG N/A GO:0003729 ... P60488 40502108
    1035362 9o3h:1N (2.65) BS04 MG N/A GO:0003729 ... P60488 40502108
    1035363 9o3h:1O (2.65) BS01 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035364 9o3h:1O (2.65) BS02 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035365 9o3h:1O (2.65) BS03 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035366 9o3h:1O (2.65) BS04 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035367 9o3h:1P (2.65) BS01 rna N/A GO:0003735 ... Q5SHQ7 40502108
    1035368 9o3h:1P (2.65) BS02 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035369 9o3h:1P (2.65) BS03 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035370 9o3h:1P (2.65) BS04 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035371 9o3h:1P (2.65) BS05 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035372 9o3h:1P (2.65) BS06 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035373 9o3h:1Q (2.65) BS01 rna N/A GO:0003735 ... P60489 40502108
    1035374 9o3h:1Q (2.65) BS02 rna N/A GO:0003735 ... P60489 40502108
    1035375 9o3h:1Q (2.65) BS03 rna N/A GO:0003735 ... P60489 40502108
    1035376 9o3h:1Q (2.65) BS04 rna N/A GO:0003735 ... P60489 40502108
    1035377 9o3h:1Q (2.65) BS05 MG N/A GO:0003735 ... P60489 40502108
    1035378 9o3h:1Q (2.65) BS06 MG N/A GO:0003735 ... P60489 40502108
    1035379 9o3h:1Q (2.65) BS07 MG N/A GO:0003735 ... P60489 40502108
    1035380 9o3h:1Q (2.65) BS08 MG N/A GO:0003735 ... P60489 40502108
    1035381 9o3h:1Q (2.65) BS09 MG N/A GO:0003735 ... P60489 40502108
    1035382 9o3h:1R (2.65) BS01 rna N/A GO:0003735 ... Q9Z9H5 40502108
    1035383 9o3h:1R (2.65) BS02 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035384 9o3h:1R (2.65) BS03 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035385 9o3h:1R (2.65) BS04 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035386 9o3h:1S (2.65) BS01 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035387 9o3h:1S (2.65) BS02 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035388 9o3h:1S (2.65) BS03 MG N/A GO:0003735 ... Q5SHQ4 40502108
    1035389 9o3h:1S (2.65) BS04 MG N/A GO:0003735 ... Q5SHQ4 40502108
    1035390 9o3h:1T (2.65) BS01 rna N/A GO:0003735 ... P60490 40502108
    1035391 9o3h:1T (2.65) BS02 rna N/A GO:0003735 ... P60490 40502108
    1035392 9o3h:1U (2.65) BS01 rna N/A GO:0000027 ... P60491 40502108
    1035393 9o3h:1U (2.65) BS02 MG N/A GO:0000027 ... P60491 40502108
    1035394 9o3h:1U (2.65) BS03 MG N/A GO:0000027 ... P60491 40502108
    1035395 9o3h:1U (2.65) BS04 MG N/A GO:0000027 ... P60491 40502108
    1035396 9o3h:1U (2.65) BS05 MG N/A GO:0000027 ... P60491 40502108
    1035397 9o3h:1U (2.65) BS06 MG N/A GO:0000027 ... P60491 40502108
    1035398 9o3h:1U (2.65) BS07 MG N/A GO:0000027 ... P60491 40502108
    1035399 9o3h:1U (2.65) BS08 MG N/A GO:0000027 ... P60491 40502108
    1035400 9o3h:1V (2.65) BS01 rna N/A GO:0003723 ... P60492 40502108

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).