SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1035601 9o3i:1E (2.8) BS02 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035602 9o3i:1E (2.8) BS03 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035603 9o3i:1E (2.8) BS04 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035604 9o3i:1E (2.8) BS05 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035605 9o3i:1F (2.8) BS01 rna N/A GO:0003735 ... Q5SHN9 40502108
    1035606 9o3i:1F (2.8) BS02 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035607 9o3i:1F (2.8) BS03 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035608 9o3i:1F (2.8) BS04 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035609 9o3i:1F (2.8) BS05 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035610 9o3i:1F (2.8) BS06 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035611 9o3i:1F (2.8) BS07 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035612 9o3i:1F (2.8) BS08 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035613 9o3i:1F (2.8) BS09 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035614 9o3i:1F (2.8) BS10 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035615 9o3i:1G (2.8) BS01 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035616 9o3i:1G (2.8) BS02 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035617 9o3i:1G (2.8) BS03 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035618 9o3i:1G (2.8) BS04 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035619 9o3i:1G (2.8) BS05 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035620 9o3i:1H (2.8) BS01 rna N/A GO:0002181 ... P0DOY8 40502108
    1035621 9o3i:1I (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ1 40502108
    1035622 9o3i:1N (2.8) BS01 rna N/A GO:0003729 ... P60488 40502108
    1035623 9o3i:1N (2.8) BS02 MG N/A GO:0003729 ... P60488 40502108
    1035624 9o3i:1N (2.8) BS03 MG N/A GO:0003729 ... P60488 40502108
    1035625 9o3i:1N (2.8) BS04 MG N/A GO:0003729 ... P60488 40502108
    1035626 9o3i:1N (2.8) BS05 MG N/A GO:0003729 ... P60488 40502108
    1035627 9o3i:1O (2.8) BS01 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035628 9o3i:1O (2.8) BS02 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035629 9o3i:1O (2.8) BS03 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035630 9o3i:1O (2.8) BS04 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035631 9o3i:1P (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ7 40502108
    1035632 9o3i:1P (2.8) BS02 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035633 9o3i:1P (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035634 9o3i:1P (2.8) BS04 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035635 9o3i:1P (2.8) BS05 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035636 9o3i:1P (2.8) BS06 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035637 9o3i:1Q (2.8) BS01 rna N/A GO:0003735 ... P60489 40502108
    1035638 9o3i:1Q (2.8) BS02 rna N/A GO:0003735 ... P60489 40502108
    1035639 9o3i:1Q (2.8) BS03 rna N/A GO:0003735 ... P60489 40502108
    1035640 9o3i:1Q (2.8) BS04 rna N/A GO:0003735 ... P60489 40502108
    1035641 9o3i:1Q (2.8) BS05 MG N/A GO:0003735 ... P60489 40502108
    1035642 9o3i:1Q (2.8) BS06 MG N/A GO:0003735 ... P60489 40502108
    1035643 9o3i:1Q (2.8) BS07 MG N/A GO:0003735 ... P60489 40502108
    1035644 9o3i:1Q (2.8) BS08 MG N/A GO:0003735 ... P60489 40502108
    1035645 9o3i:1Q (2.8) BS09 MG N/A GO:0003735 ... P60489 40502108
    1035646 9o3i:1R (2.8) BS01 rna N/A GO:0003735 ... Q9Z9H5 40502108
    1035647 9o3i:1R (2.8) BS02 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035648 9o3i:1R (2.8) BS03 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035649 9o3i:1S (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035650 9o3i:1S (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035651 9o3i:1T (2.8) BS01 rna N/A GO:0003735 ... P60490 40502108
    1035652 9o3i:1T (2.8) BS02 rna N/A GO:0003735 ... P60490 40502108
    1035653 9o3i:1U (2.8) BS01 rna N/A GO:0000027 ... P60491 40502108
    1035654 9o3i:1U (2.8) BS02 MG N/A GO:0000027 ... P60491 40502108
    1035655 9o3i:1U (2.8) BS03 MG N/A GO:0000027 ... P60491 40502108
    1035656 9o3i:1U (2.8) BS04 MG N/A GO:0000027 ... P60491 40502108
    1035657 9o3i:1U (2.8) BS05 MG N/A GO:0000027 ... P60491 40502108
    1035658 9o3i:1U (2.8) BS06 MG N/A GO:0000027 ... P60491 40502108
    1035659 9o3i:1U (2.8) BS07 MG N/A GO:0000027 ... P60491 40502108
    1035660 9o3i:1V (2.8) BS01 rna N/A GO:0003723 ... P60492 40502108
    1035661 9o3i:1V (2.8) BS02 MG N/A GO:0003723 ... P60492 40502108
    1035662 9o3i:1V (2.8) BS03 MG N/A GO:0003723 ... P60492 40502108
    1035663 9o3i:1V (2.8) BS04 MG N/A GO:0003723 ... P60492 40502108
    1035664 9o3i:1V (2.8) BS05 MG N/A GO:0003723 ... P60492 40502108
    1035665 9o3i:1V (2.8) BS06 MG N/A GO:0003723 ... P60492 40502108
    1035666 9o3i:1V (2.8) BS07 MG N/A GO:0003723 ... P60492 40502108
    1035667 9o3i:1W (2.8) BS01 rna N/A GO:0003735 ... Q5SHP3 40502108
    1035668 9o3i:1W (2.8) BS02 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035669 9o3i:1W (2.8) BS03 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035670 9o3i:1W (2.8) BS04 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035671 9o3i:1W (2.8) BS05 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035672 9o3i:1W (2.8) BS06 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035673 9o3i:1X (2.8) BS01 rna N/A GO:0003735 ... Q5SHP0 40502108
    1035674 9o3i:1X (2.8) BS02 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035675 9o3i:1X (2.8) BS03 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035676 9o3i:1X (2.8) BS04 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035677 9o3i:1X (2.8) BS05 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035678 9o3i:1Y (2.8) BS01 rna N/A GO:0003723 ... Q5SHP9 40502108
    1035679 9o3i:1Y (2.8) BS02 MG N/A GO:0003723 ... Q5SHP9 40502108
    1035680 9o3i:1Y (2.8) BS03 ZN N/A GO:0003723 ... Q5SHP9 40502108
    1035681 9o3i:1Z (2.8) BS01 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035682 9o3i:1Z (2.8) BS02 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035683 9o3i:1b (2.8) BS01 rna N/A GO:0003735 ... P80371 40502108
    1035684 9o3i:1c (2.8) BS01 rna N/A GO:0003676 ... P80372 40502108
    1035685 9o3i:1d (2.8) BS01 rna N/A GO:0003723 ... P80373 40502108
    1035686 9o3i:1d (2.8) BS02 SF4 N/A GO:0003723 ... P80373 40502108
    1035687 9o3i:1e (2.8) BS01 rna N/A GO:0003723 ... Q5SHQ5 40502108
    1035688 9o3i:1e (2.8) BS02 MG N/A GO:0003723 ... Q5SHQ5 40502108
    1035689 9o3i:1f (2.8) BS01 rna N/A GO:0003735 ... Q5SLP8 40502108
    1035690 9o3i:1f (2.8) BS02 MG N/A GO:0003735 ... Q5SLP8 40502108
    1035691 9o3i:1f (2.8) BS03 MG N/A GO:0003735 ... Q5SLP8 40502108
    1035692 9o3i:1g (2.8) BS01 rna N/A GO:0000049 ... P17291 40502108
    1035693 9o3i:1g (2.8) BS02 rna N/A GO:0000049 ... P17291 40502108
    1035694 9o3i:1h (2.8) BS01 rna N/A GO:0003735 ... P0DOY9 40502108
    1035695 9o3i:1i (2.8) BS01 rna N/A GO:0003723 ... P80374 40502108
    1035696 9o3i:1i (2.8) BS02 rna N/A GO:0003723 ... P80374 40502108
    1035697 9o3i:1j (2.8) BS01 rna N/A GO:0000049 ... Q5SHN7 40502108
    1035698 9o3i:1k (2.8) BS01 rna N/A GO:0003735 ... P80376 40502108
    1035699 9o3i:1k (2.8) BS02 MG N/A GO:0003735 ... P80376 40502108
    1035700 9o3i:1l (2.8) BS01 rna N/A GO:0000049 ... Q5SHN3 40502108
    1035701 9o3i:1l (2.8) BS02 MG N/A GO:0000049 ... Q5SHN3 40502108
    1035702 9o3i:1m (2.8) BS01 rna N/A GO:0000049 ... P80377 40502108
    1035703 9o3i:1m (2.8) BS02 rna N/A GO:0000049 ... P80377 40502108
    1035704 9o3i:1m (2.8) BS03 rna N/A GO:0000049 ... P80377 40502108
    1035705 9o3i:1m (2.8) BS04 rna N/A GO:0000049 ... P80377 40502108
    1035706 9o3i:1m (2.8) BS05 MG N/A GO:0000049 ... P80377 40502108
    1035707 9o3i:1n (2.8) BS01 rna N/A GO:0003735 ... P0DOY6 40502108
    1035708 9o3i:1n (2.8) BS02 ZN N/A GO:0003735 ... P0DOY6 40502108
    1035709 9o3i:1o (2.8) BS01 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035710 9o3i:1o (2.8) BS02 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035711 9o3i:1p (2.8) BS01 rna N/A GO:0003735 ... Q5SJH3 40502108
    1035712 9o3i:1q (2.8) BS01 rna N/A GO:0003735 ... P0DOY7 40502108
    1035713 9o3i:1r (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ0 40502108
    1035714 9o3i:1s (2.8) BS01 rna N/A GO:0000028 ... Q5SHP2 40502108
    1035715 9o3i:1t (2.8) BS01 rna N/A GO:0003723 ... P80380 40502108
    1035716 9o3i:1t (2.8) BS02 MG N/A GO:0003723 ... P80380 40502108
    1035717 9o3i:20 (2.8) BS01 rna N/A GO:0003735 ... P60493 40502108
    1035718 9o3i:20 (2.8) BS02 rna N/A GO:0003735 ... P60493 40502108
    1035719 9o3i:21 (2.8) BS01 rna N/A GO:0003735 ... P60494 40502108
    1035720 9o3i:21 (2.8) BS02 rna N/A GO:0003735 ... P60494 40502108
    1035721 9o3i:21 (2.8) BS03 MG N/A GO:0003735 ... P60494 40502108
    1035722 9o3i:22 (2.8) BS01 rna N/A GO:0003735 ... Q5SHP6 40502108
    1035723 9o3i:23 (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035724 9o3i:23 (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035725 9o3i:23 (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1035726 9o3i:24 (2.8) BS01 rna N/A GO:0003735 ... Q5SJE1 40502108
    1035727 9o3i:24 (2.8) BS02 ZN N/A GO:0003735 ... Q5SJE1 40502108
    1035728 9o3i:25 (2.8) BS01 rna N/A GO:0003735 ... P80339 40502108
    1035729 9o3i:25 (2.8) BS02 MG N/A GO:0003735 ... P80339 40502108
    1035730 9o3i:25 (2.8) BS03 MG N/A GO:0003735 ... P80339 40502108
    1035731 9o3i:25 (2.8) BS04 ZN N/A GO:0003735 ... P80339 40502108
    1035732 9o3i:26 (2.8) BS01 rna N/A GO:0003735 ... P35871 40502108
    1035733 9o3i:26 (2.8) BS02 ZN N/A GO:0003735 ... P35871 40502108
    1035734 9o3i:27 (2.8) BS01 rna N/A GO:0003735 ... P80340 40502108
    1035735 9o3i:27 (2.8) BS02 MG N/A GO:0003735 ... P80340 40502108
    1035736 9o3i:28 (2.8) BS01 rna N/A GO:0003735 ... Q5SKU1 40502108
    1035737 9o3i:29 (2.8) BS01 rna N/A GO:0003735 ... Q5SHR2 40502108
    1035738 9o3i:29 (2.8) BS02 ZN N/A GO:0003735 ... Q5SHR2 40502108
    1035739 9o3i:2D (2.8) BS01 rna N/A GO:0002181 ... P60405 40502108
    1035740 9o3i:2D (2.8) BS02 rna N/A GO:0002181 ... P60405 40502108
    1035741 9o3i:2D (2.8) BS03 MG N/A GO:0002181 ... P60405 40502108
    1035742 9o3i:2D (2.8) BS04 MG N/A GO:0002181 ... P60405 40502108
    1035743 9o3i:2D (2.8) BS05 MG N/A GO:0002181 ... P60405 40502108
    1035744 9o3i:2D (2.8) BS06 MG N/A GO:0002181 ... P60405 40502108
    1035745 9o3i:2D (2.8) BS07 MG N/A GO:0002181 ... P60405 40502108
    1035746 9o3i:2E (2.8) BS01 rna N/A GO:0003735 ... Q5SHN8 40502108
    1035747 9o3i:2E (2.8) BS02 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035748 9o3i:2F (2.8) BS01 rna N/A GO:0003735 ... Q5SHN9 40502108
    1035749 9o3i:2F (2.8) BS02 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035750 9o3i:2F (2.8) BS03 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035751 9o3i:2F (2.8) BS04 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035752 9o3i:2G (2.8) BS01 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035753 9o3i:2G (2.8) BS02 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035754 9o3i:2G (2.8) BS03 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035755 9o3i:2H (2.8) BS01 rna N/A GO:0002181 ... P0DOY8 40502108
    1035756 9o3i:2I (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ1 40502108
    1035757 9o3i:2N (2.8) BS01 rna N/A GO:0003729 ... P60488 40502108
    1035758 9o3i:2O (2.8) BS01 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035759 9o3i:2O (2.8) BS02 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035760 9o3i:2P (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ7 40502108
    1035761 9o3i:2Q (2.8) BS01 rna N/A GO:0003735 ... P60489 40502108
    1035762 9o3i:2Q (2.8) BS02 rna N/A GO:0003735 ... P60489 40502108
    1035763 9o3i:2Q (2.8) BS03 rna N/A GO:0003735 ... P60489 40502108
    1035764 9o3i:2Q (2.8) BS04 rna N/A GO:0003735 ... P60489 40502108
    1035765 9o3i:2Q (2.8) BS05 MG N/A GO:0003735 ... P60489 40502108
    1035766 9o3i:2Q (2.8) BS06 MG N/A GO:0003735 ... P60489 40502108
    1035767 9o3i:2R (2.8) BS01 rna N/A GO:0003735 ... Q9Z9H5 40502108
    1035768 9o3i:2S (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035769 9o3i:2S (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035770 9o3i:2T (2.8) BS01 rna N/A GO:0003735 ... P60490 40502108
    1035771 9o3i:2T (2.8) BS02 rna N/A GO:0003735 ... P60490 40502108
    1035772 9o3i:2T (2.8) BS03 MG N/A GO:0003735 ... P60490 40502108
    1035773 9o3i:2U (2.8) BS01 rna N/A GO:0000027 ... P60491 40502108
    1035774 9o3i:2U (2.8) BS02 MG N/A GO:0000027 ... P60491 40502108
    1035775 9o3i:2V (2.8) BS01 rna N/A GO:0003723 ... P60492 40502108
    1035776 9o3i:2V (2.8) BS02 MG N/A GO:0003723 ... P60492 40502108
    1035777 9o3i:2W (2.8) BS01 rna N/A GO:0003735 ... Q5SHP3 40502108
    1035778 9o3i:2W (2.8) BS02 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035779 9o3i:2W (2.8) BS03 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035780 9o3i:2X (2.8) BS01 rna N/A GO:0003735 ... Q5SHP0 40502108
    1035781 9o3i:2X (2.8) BS02 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035782 9o3i:2Y (2.8) BS01 rna N/A GO:0003723 ... Q5SHP9 40502108
    1035783 9o3i:2Y (2.8) BS02 ZN N/A GO:0003723 ... Q5SHP9 40502108
    1035784 9o3i:2Z (2.8) BS01 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035785 9o3i:2Z (2.8) BS02 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035786 9o3i:2Z (2.8) BS03 MG N/A GO:0003723 ... Q5SHZ1 40502108
    1035787 9o3i:2b (2.8) BS01 rna N/A GO:0003735 ... P80371 40502108
    1035788 9o3i:2c (2.8) BS01 rna N/A GO:0003676 ... P80372 40502108
    1035789 9o3i:2d (2.8) BS01 rna N/A GO:0003723 ... P80373 40502108
    1035790 9o3i:2d (2.8) BS02 MG N/A GO:0003723 ... P80373 40502108
    1035791 9o3i:2d (2.8) BS03 SF4 N/A GO:0003723 ... P80373 40502108
    1035792 9o3i:2e (2.8) BS01 rna N/A GO:0003723 ... Q5SHQ5 40502108
    1035793 9o3i:2e (2.8) BS02 MG N/A GO:0003723 ... Q5SHQ5 40502108
    1035794 9o3i:2f (2.8) BS01 rna N/A GO:0003735 ... Q5SLP8 40502108
    1035795 9o3i:2g (2.8) BS01 rna N/A GO:0000049 ... P17291 40502108
    1035796 9o3i:2g (2.8) BS02 rna N/A GO:0000049 ... P17291 40502108
    1035797 9o3i:2h (2.8) BS01 rna N/A GO:0003735 ... P0DOY9 40502108
    1035798 9o3i:2i (2.8) BS01 rna N/A GO:0003723 ... P80374 40502108
    1035799 9o3i:2i (2.8) BS02 rna N/A GO:0003723 ... P80374 40502108
    1035800 9o3i:2j (2.8) BS01 rna N/A GO:0000049 ... Q5SHN7 40502108

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).