SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1035801 9o3i:2k (2.8) BS01 rna N/A GO:0003735 ... P80376 40502108
    1035802 9o3i:2k (2.8) BS02 rna N/A GO:0003735 ... P80376 40502108
    1035803 9o3i:2k (2.8) BS03 MG N/A GO:0003735 ... P80376 40502108
    1035804 9o3i:2l (2.8) BS01 rna N/A GO:0000049 ... Q5SHN3 40502108
    1035805 9o3i:2l (2.8) BS02 MG N/A GO:0000049 ... Q5SHN3 40502108
    1035806 9o3i:2l (2.8) BS03 MG N/A GO:0000049 ... Q5SHN3 40502108
    1035807 9o3i:2m (2.8) BS01 rna N/A GO:0000049 ... P80377 40502108
    1035808 9o3i:2m (2.8) BS02 rna N/A GO:0000049 ... P80377 40502108
    1035809 9o3i:2n (2.8) BS01 rna N/A GO:0003735 ... P0DOY6 40502108
    1035810 9o3i:2n (2.8) BS02 ZN N/A GO:0003735 ... P0DOY6 40502108
    1035811 9o3i:2o (2.8) BS01 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035812 9o3i:2o (2.8) BS02 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035813 9o3i:2p (2.8) BS01 rna N/A GO:0003735 ... Q5SJH3 40502108
    1035814 9o3i:2q (2.8) BS01 rna N/A GO:0003735 ... P0DOY7 40502108
    1035815 9o3i:2q (2.8) BS02 MG N/A GO:0003735 ... P0DOY7 40502108
    1035816 9o3i:2q (2.8) BS03 MG N/A GO:0003735 ... P0DOY7 40502108
    1035817 9o3i:2r (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ0 40502108
    1035818 9o3i:2r (2.8) BS02 MG N/A GO:0003735 ... Q5SLQ0 40502108
    1035819 9o3i:2s (2.8) BS01 rna N/A GO:0000028 ... Q5SHP2 40502108
    1035820 9o3i:2t (2.8) BS01 rna N/A GO:0003723 ... P80380 40502108
    1035821 9o3i:2t (2.8) BS02 MG N/A GO:0003723 ... P80380 40502108
    1035822 9o3j:10 (2.6) BS01 rna N/A GO:0003735 ... P60493 40502108
    1035823 9o3j:10 (2.6) BS02 rna N/A GO:0003735 ... P60493 40502108
    1035824 9o3j:10 (2.6) BS03 rna N/A GO:0003735 ... P60493 40502108
    1035825 9o3j:10 (2.6) BS04 MG N/A GO:0003735 ... P60493 40502108
    1035826 9o3j:10 (2.6) BS05 MG N/A GO:0003735 ... P60493 40502108
    1035827 9o3j:10 (2.6) BS06 MG N/A GO:0003735 ... P60493 40502108
    1035828 9o3j:11 (2.6) BS01 rna N/A GO:0003735 ... P60494 40502108
    1035829 9o3j:11 (2.6) BS02 rna N/A GO:0003735 ... P60494 40502108
    1035830 9o3j:11 (2.6) BS03 MG N/A GO:0003735 ... P60494 40502108
    1035831 9o3j:12 (2.6) BS01 rna N/A GO:0003735 ... Q5SHP6 40502108
    1035832 9o3j:12 (2.6) BS02 MG N/A GO:0003735 ... Q5SHP6 40502108
    1035833 9o3j:13 (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035834 9o3j:13 (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035835 9o3j:13 (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1035836 9o3j:14 (2.6) BS01 rna N/A GO:0003735 ... Q5SJE1 40502108
    1035837 9o3j:14 (2.6) BS02 ZN N/A GO:0003735 ... Q5SJE1 40502108
    1035838 9o3j:15 (2.6) BS01 rna N/A GO:0003735 ... P80339 40502108
    1035839 9o3j:15 (2.6) BS02 MG N/A GO:0003735 ... P80339 40502108
    1035840 9o3j:15 (2.6) BS03 MG N/A GO:0003735 ... P80339 40502108
    1035841 9o3j:15 (2.6) BS04 MG N/A GO:0003735 ... P80339 40502108
    1035842 9o3j:15 (2.6) BS05 ZN N/A GO:0003735 ... P80339 40502108
    1035843 9o3j:16 (2.6) BS01 rna N/A GO:0003735 ... P35871 40502108
    1035844 9o3j:16 (2.6) BS02 MG N/A GO:0003735 ... P35871 40502108
    1035845 9o3j:16 (2.6) BS03 MG N/A GO:0003735 ... P35871 40502108
    1035846 9o3j:16 (2.6) BS04 ZN N/A GO:0003735 ... P35871 40502108
    1035847 9o3j:17 (2.6) BS01 rna N/A GO:0003735 ... P80340 40502108
    1035848 9o3j:17 (2.6) BS02 MG N/A GO:0003735 ... P80340 40502108
    1035849 9o3j:17 (2.6) BS03 MG N/A GO:0003735 ... P80340 40502108
    1035850 9o3j:18 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 40502108
    1035851 9o3j:18 (2.6) BS02 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035852 9o3j:18 (2.6) BS03 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035853 9o3j:18 (2.6) BS04 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035854 9o3j:18 (2.6) BS05 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035855 9o3j:18 (2.6) BS06 MG N/A GO:0003735 ... Q5SKU1 40502108
    1035856 9o3j:19 (2.6) BS01 rna N/A GO:0003735 ... Q5SHR2 40502108
    1035857 9o3j:19 (2.6) BS02 ZN N/A GO:0003735 ... Q5SHR2 40502108
    1035858 9o3j:1D (2.6) BS01 rna N/A GO:0002181 ... P60405 40502108
    1035859 9o3j:1D (2.6) BS02 rna N/A GO:0002181 ... P60405 40502108
    1035860 9o3j:1D (2.6) BS03 MG N/A GO:0002181 ... P60405 40502108
    1035861 9o3j:1D (2.6) BS04 MG N/A GO:0002181 ... P60405 40502108
    1035862 9o3j:1D (2.6) BS05 MG N/A GO:0002181 ... P60405 40502108
    1035863 9o3j:1D (2.6) BS06 MG N/A GO:0002181 ... P60405 40502108
    1035864 9o3j:1D (2.6) BS07 MG N/A GO:0002181 ... P60405 40502108
    1035865 9o3j:1D (2.6) BS08 MG N/A GO:0002181 ... P60405 40502108
    1035866 9o3j:1D (2.6) BS09 MG N/A GO:0002181 ... P60405 40502108
    1035867 9o3j:1D (2.6) BS10 MG N/A GO:0002181 ... P60405 40502108
    1035868 9o3j:1E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 40502108
    1035869 9o3j:1E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035870 9o3j:1E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035871 9o3j:1E (2.6) BS04 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035872 9o3j:1E (2.6) BS05 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035873 9o3j:1E (2.6) BS06 MG N/A GO:0003735 ... Q5SHN8 40502108
    1035874 9o3j:1F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 40502108
    1035875 9o3j:1F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035876 9o3j:1F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035877 9o3j:1F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035878 9o3j:1F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035879 9o3j:1F (2.6) BS06 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035880 9o3j:1F (2.6) BS07 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035881 9o3j:1F (2.6) BS08 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035882 9o3j:1F (2.6) BS09 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035883 9o3j:1F (2.6) BS10 MG N/A GO:0003735 ... Q5SHN9 40502108
    1035884 9o3j:1G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035885 9o3j:1G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035886 9o3j:1G (2.6) BS03 rna N/A GO:0000049 ... Q5SHQ0 40502108
    1035887 9o3j:1G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035888 9o3j:1G (2.6) BS05 MG N/A GO:0000049 ... Q5SHQ0 40502108
    1035889 9o3j:1H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 40502108
    1035890 9o3j:1I (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ1 40502108
    1035891 9o3j:1N (2.6) BS01 rna N/A GO:0003729 ... P60488 40502108
    1035892 9o3j:1N (2.6) BS02 MG N/A GO:0003729 ... P60488 40502108
    1035893 9o3j:1N (2.6) BS03 MG N/A GO:0003729 ... P60488 40502108
    1035894 9o3j:1N (2.6) BS04 MG N/A GO:0003729 ... P60488 40502108
    1035895 9o3j:1O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035896 9o3j:1O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 40502108
    1035897 9o3j:1O (2.6) BS03 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035898 9o3j:1O (2.6) BS04 MG N/A GO:0003735 ... Q5SHP8 40502108
    1035899 9o3j:1P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 40502108
    1035900 9o3j:1P (2.6) BS02 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035901 9o3j:1P (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035902 9o3j:1P (2.6) BS04 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035903 9o3j:1P (2.6) BS05 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035904 9o3j:1P (2.6) BS06 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035905 9o3j:1P (2.6) BS07 MG N/A GO:0003735 ... Q5SHQ7 40502108
    1035906 9o3j:1Q (2.6) BS01 rna N/A GO:0003735 ... P60489 40502108
    1035907 9o3j:1Q (2.6) BS02 rna N/A GO:0003735 ... P60489 40502108
    1035908 9o3j:1Q (2.6) BS03 rna N/A GO:0003735 ... P60489 40502108
    1035909 9o3j:1Q (2.6) BS04 rna N/A GO:0003735 ... P60489 40502108
    1035910 9o3j:1Q (2.6) BS05 MG N/A GO:0003735 ... P60489 40502108
    1035911 9o3j:1Q (2.6) BS06 MG N/A GO:0003735 ... P60489 40502108
    1035912 9o3j:1Q (2.6) BS07 MG N/A GO:0003735 ... P60489 40502108
    1035913 9o3j:1Q (2.6) BS08 MG N/A GO:0003735 ... P60489 40502108
    1035914 9o3j:1Q (2.6) BS09 MG N/A GO:0003735 ... P60489 40502108
    1035915 9o3j:1R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 40502108
    1035916 9o3j:1R (2.6) BS02 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035917 9o3j:1R (2.6) BS03 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035918 9o3j:1R (2.6) BS04 MG N/A GO:0003735 ... Q9Z9H5 40502108
    1035919 9o3j:1S (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035920 9o3j:1S (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ4 40502108
    1035921 9o3j:1S (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ4 40502108
    1035922 9o3j:1S (2.6) BS04 MG N/A GO:0003735 ... Q5SHQ4 40502108
    1035923 9o3j:1T (2.6) BS01 rna N/A GO:0003735 ... P60490 40502108
    1035924 9o3j:1T (2.6) BS02 rna N/A GO:0003735 ... P60490 40502108
    1035925 9o3j:1U (2.6) BS01 rna N/A GO:0000027 ... P60491 40502108
    1035926 9o3j:1U (2.6) BS02 MG N/A GO:0000027 ... P60491 40502108
    1035927 9o3j:1U (2.6) BS03 MG N/A GO:0000027 ... P60491 40502108
    1035928 9o3j:1U (2.6) BS04 MG N/A GO:0000027 ... P60491 40502108
    1035929 9o3j:1U (2.6) BS05 MG N/A GO:0000027 ... P60491 40502108
    1035930 9o3j:1U (2.6) BS06 MG N/A GO:0000027 ... P60491 40502108
    1035931 9o3j:1U (2.6) BS07 MG N/A GO:0000027 ... P60491 40502108
    1035932 9o3j:1U (2.6) BS08 MG N/A GO:0000027 ... P60491 40502108
    1035933 9o3j:1V (2.6) BS01 rna N/A GO:0003723 ... P60492 40502108
    1035934 9o3j:1V (2.6) BS02 MG N/A GO:0003723 ... P60492 40502108
    1035935 9o3j:1V (2.6) BS03 MG N/A GO:0003723 ... P60492 40502108
    1035936 9o3j:1V (2.6) BS04 MG N/A GO:0003723 ... P60492 40502108
    1035937 9o3j:1V (2.6) BS05 MG N/A GO:0003723 ... P60492 40502108
    1035938 9o3j:1V (2.6) BS06 MG N/A GO:0003723 ... P60492 40502108
    1035939 9o3j:1V (2.6) BS07 MG N/A GO:0003723 ... P60492 40502108
    1035940 9o3j:1W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 40502108
    1035941 9o3j:1W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035942 9o3j:1W (2.6) BS03 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035943 9o3j:1W (2.6) BS04 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035944 9o3j:1W (2.6) BS05 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035945 9o3j:1W (2.6) BS06 MG N/A GO:0003735 ... Q5SHP3 40502108
    1035946 9o3j:1X (2.6) BS01 rna N/A GO:0003735 ... Q5SHP0 40502108
    1035947 9o3j:1X (2.6) BS02 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035948 9o3j:1X (2.6) BS03 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035949 9o3j:1X (2.6) BS04 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035950 9o3j:1X (2.6) BS05 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035951 9o3j:1X (2.6) BS06 MG N/A GO:0003735 ... Q5SHP0 40502108
    1035952 9o3j:1Y (2.6) BS01 rna N/A GO:0003723 ... Q5SHP9 40502108
    1035953 9o3j:1Y (2.6) BS02 MG N/A GO:0003723 ... Q5SHP9 40502108
    1035954 9o3j:1Y (2.6) BS03 ZN N/A GO:0003723 ... Q5SHP9 40502108
    1035955 9o3j:1Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035956 9o3j:1Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 40502108
    1035957 9o3j:1Z (2.6) BS03 MG N/A GO:0003723 ... Q5SHZ1 40502108
    1035958 9o3j:1b (2.6) BS01 rna N/A GO:0003735 ... P80371 40502108
    1035959 9o3j:1c (2.6) BS01 rna N/A GO:0003676 ... P80372 40502108
    1035960 9o3j:1d (2.6) BS01 rna N/A GO:0003723 ... P80373 40502108
    1035961 9o3j:1d (2.6) BS02 SF4 N/A GO:0003723 ... P80373 40502108
    1035962 9o3j:1e (2.6) BS01 rna N/A GO:0003723 ... Q5SHQ5 40502108
    1035963 9o3j:1e (2.6) BS02 MG N/A GO:0003723 ... Q5SHQ5 40502108
    1035964 9o3j:1f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 40502108
    1035965 9o3j:1f (2.6) BS02 MG N/A GO:0003735 ... Q5SLP8 40502108
    1035966 9o3j:1g (2.6) BS01 rna N/A GO:0000049 ... P17291 40502108
    1035967 9o3j:1g (2.6) BS02 rna N/A GO:0000049 ... P17291 40502108
    1035968 9o3j:1h (2.6) BS01 rna N/A GO:0003735 ... P0DOY9 40502108
    1035969 9o3j:1i (2.6) BS01 rna N/A GO:0003723 ... P80374 40502108
    1035970 9o3j:1i (2.6) BS02 rna N/A GO:0003723 ... P80374 40502108
    1035971 9o3j:1j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 40502108
    1035972 9o3j:1k (2.6) BS01 rna N/A GO:0003735 ... P80376 40502108
    1035973 9o3j:1k (2.6) BS02 MG N/A GO:0003735 ... P80376 40502108
    1035974 9o3j:1l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 40502108
    1035975 9o3j:1l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 40502108
    1035976 9o3j:1m (2.6) BS01 rna N/A GO:0000049 ... P80377 40502108
    1035977 9o3j:1m (2.6) BS02 rna N/A GO:0000049 ... P80377 40502108
    1035978 9o3j:1m (2.6) BS03 rna N/A GO:0000049 ... P80377 40502108
    1035979 9o3j:1m (2.6) BS04 MG N/A GO:0000049 ... P80377 40502108
    1035980 9o3j:1n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 40502108
    1035981 9o3j:1n (2.6) BS02 ZN N/A GO:0003735 ... P0DOY6 40502108
    1035982 9o3j:1o (2.6) BS01 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035983 9o3j:1o (2.6) BS02 rna N/A GO:0003735 ... Q5SJ76 40502108
    1035984 9o3j:1p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 40502108
    1035985 9o3j:1q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 40502108
    1035986 9o3j:1r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 40502108
    1035987 9o3j:1s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 40502108
    1035988 9o3j:1t (2.6) BS01 rna N/A GO:0003723 ... P80380 40502108
    1035989 9o3j:1t (2.6) BS02 MG N/A GO:0003723 ... P80380 40502108
    1035990 9o3j:20 (2.6) BS01 rna N/A GO:0003735 ... P60493 40502108
    1035991 9o3j:20 (2.6) BS02 rna N/A GO:0003735 ... P60493 40502108
    1035992 9o3j:20 (2.6) BS03 rna N/A GO:0003735 ... P60493 40502108
    1035993 9o3j:20 (2.6) BS04 MG N/A GO:0003735 ... P60493 40502108
    1035994 9o3j:21 (2.6) BS01 rna N/A GO:0003735 ... P60494 40502108
    1035995 9o3j:21 (2.6) BS02 rna N/A GO:0003735 ... P60494 40502108
    1035996 9o3j:22 (2.6) BS01 rna N/A GO:0003735 ... Q5SHP6 40502108
    1035997 9o3j:23 (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035998 9o3j:23 (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ6 40502108
    1035999 9o3j:23 (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ6 40502108
    1036000 9o3j:24 (2.6) BS01 rna N/A GO:0003735 ... Q5SJE1 40502108

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).