SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1036601 9o3v:LB (2.2) BS01 rna N/A N/A N/A 41735331
    1036602 9o3v:LC (2.2) BS01 rna N/A N/A N/A 41735331
    1036603 9o3v:LC (2.2) BS02 rna N/A N/A N/A 41735331
    1036604 9o3v:LD (2.2) BS01 rna N/A N/A N/A 41735331
    1036605 9o3v:LD (2.2) BS02 rna N/A N/A N/A 41735331
    1036606 9o3v:LE (2.2) BS01 rna N/A N/A N/A 41735331
    1036607 9o3v:LF (2.2) BS01 rna N/A N/A N/A 41735331
    1036608 9o3v:LF (2.2) BS02 rna N/A N/A N/A 41735331
    1036609 9o3v:LG (2.2) BS01 rna N/A N/A N/A 41735331
    1036610 9o3v:LG (2.2) BS02 rna N/A N/A N/A 41735331
    1036611 9o3v:LH (2.2) BS01 rna N/A N/A N/A 41735331
    1036612 9o3v:LI (2.2) BS01 rna N/A N/A N/A 41735331
    1036613 9o3v:LI (2.2) BS02 rna N/A N/A N/A 41735331
    1036614 9o3v:LI (2.2) BS03 rna N/A N/A N/A 41735331
    1036615 9o3v:LI (2.2) BS04 MG N/A N/A N/A 41735331
    1036616 9o3v:LJ (2.2) BS01 rna N/A N/A N/A 41735331
    1036617 9o3v:LJ (2.2) BS02 rna N/A N/A N/A 41735331
    1036618 9o3v:LJ (2.2) BS03 rna N/A N/A N/A 41735331
    1036619 9o3v:LL (2.2) BS01 rna N/A N/A N/A 41735331
    1036620 9o3v:LL (2.2) BS02 rna N/A N/A N/A 41735331
    1036621 9o3v:LL (2.2) BS03 MG N/A N/A N/A 41735331
    1036622 9o3v:LM (2.2) BS01 rna N/A N/A N/A 41735331
    1036623 9o3v:LN (2.2) BS01 rna N/A N/A N/A 41735331
    1036624 9o3v:LN (2.2) BS02 rna N/A N/A N/A 41735331
    1036625 9o3v:LO (2.2) BS01 rna N/A N/A N/A 41735331
    1036626 9o3v:LP (2.2) BS01 rna N/A N/A N/A 41735331
    1036627 9o3v:LP (2.2) BS02 rna N/A N/A N/A 41735331
    1036628 9o3v:LQ (2.2) BS01 rna N/A N/A N/A 41735331
    1036629 9o3v:LR (2.2) BS01 rna N/A N/A N/A 41735331
    1036630 9o3v:LR (2.2) BS02 rna N/A N/A N/A 41735331
    1036631 9o3v:LS (2.2) BS01 rna N/A N/A N/A 41735331
    1036632 9o3v:LS (2.2) BS02 rna N/A N/A N/A 41735331
    1036633 9o3v:LT (2.2) BS01 rna N/A N/A N/A 41735331
    1036634 9o3v:LT (2.2) BS02 rna N/A N/A N/A 41735331
    1036635 9o3v:LU (2.2) BS01 rna N/A N/A N/A 41735331
    1036636 9o3v:LV (2.2) BS01 rna N/A N/A N/A 41735331
    1036637 9o3v:LW (2.2) BS01 rna N/A N/A N/A 41735331
    1036638 9o3v:LW (2.2) BS02 rna N/A N/A N/A 41735331
    1036639 9o3v:LX (2.2) BS01 rna N/A N/A N/A 41735331
    1036640 9o3v:LX (2.2) BS02 rna N/A N/A N/A 41735331
    1036641 9o3v:LY (2.2) BS01 rna N/A N/A N/A 41735331
    1036642 9o3v:LY (2.2) BS02 rna N/A N/A N/A 41735331
    1036643 9o3v:LZ (2.2) BS01 rna N/A N/A N/A 41735331
    1036644 9o3v:La (2.2) BS01 rna N/A N/A N/A 41735331
    1036645 9o3v:Lb (2.2) BS01 rna N/A N/A N/A 41735331
    1036646 9o3v:Lc (2.2) BS01 rna N/A N/A N/A 41735331
    1036647 9o3v:Ld (2.2) BS01 rna N/A N/A N/A 41735331
    1036648 9o3v:Le (2.2) BS01 rna N/A N/A N/A 41735331
    1036649 9o3v:Lf (2.2) BS01 rna N/A N/A N/A 41735331
    1036650 9o3v:Lg (2.2) BS01 rna N/A N/A N/A 41735331
    1036651 9o3v:Lg (2.2) BS02 ZN N/A N/A N/A 41735331
    1036652 9o3v:Lh (2.2) BS01 rna N/A N/A N/A 41735331
    1036653 9o3v:Lh (2.2) BS02 rna N/A N/A N/A 41735331
    1036654 9o3v:Li (2.2) BS01 rna N/A N/A N/A 41735331
    1036655 9o3v:Lj (2.2) BS01 rna N/A N/A N/A 41735331
    1036656 9o3v:Lj (2.2) BS02 rna N/A N/A N/A 41735331
    1036657 9o3v:Lj (2.2) BS03 ZN N/A N/A N/A 41735331
    1036658 9o3v:Lk (2.2) BS01 rna N/A N/A N/A 41735331
    1036659 9o3v:Ll (2.2) BS01 rna N/A N/A N/A 41735331
    1036660 9o3v:Ll (2.2) BS02 rna N/A N/A N/A 41735331
    1036661 9o3v:Lm (2.2) BS01 rna N/A N/A N/A 41735331
    1036662 9o3v:Lm (2.2) BS02 ZN N/A N/A N/A 41735331
    1036663 9o3v:Lo (2.2) BS01 rna N/A N/A N/A 41735331
    1036664 9o3v:Lo (2.2) BS02 rna N/A N/A N/A 41735331
    1036665 9o3v:Lo (2.2) BS03 MG N/A N/A N/A 41735331
    1036666 9o3v:Lo (2.2) BS04 ZN N/A N/A N/A 41735331
    1036667 9o3v:Lp (2.2) BS01 rna N/A N/A N/A 41735331
    1036668 9o3v:Lp (2.2) BS02 ZN N/A N/A N/A 41735331
    1036669 9o3v:Lr (2.2) BS01 rna N/A N/A N/A 41735331
    1036670 9o3v:SA (2.2) BS01 rna N/A N/A N/A 41735331
    1036671 9o3v:SB (2.2) BS01 rna N/A N/A N/A 41735331
    1036672 9o3v:SB (2.2) BS02 rna N/A N/A N/A 41735331
    1036673 9o3v:SC (2.2) BS01 rna N/A N/A N/A 41735331
    1036674 9o3v:SD (2.2) BS01 rna N/A N/A N/A 41735331
    1036675 9o3v:SE (2.2) BS01 rna N/A N/A N/A 41735331
    1036676 9o3v:SF (2.2) BS01 rna N/A N/A N/A 41735331
    1036677 9o3v:SG (2.2) BS01 rna N/A N/A N/A 41735331
    1036678 9o3v:SH (2.2) BS01 rna N/A N/A N/A 41735331
    1036679 9o3v:SI (2.2) BS01 rna N/A N/A N/A 41735331
    1036680 9o3v:SI (2.2) BS02 rna N/A N/A N/A 41735331
    1036681 9o3v:SJ (2.2) BS01 rna N/A N/A N/A 41735331
    1036682 9o3v:SK (2.2) BS01 rna N/A N/A N/A 41735331
    1036683 9o3v:SL (2.2) BS01 rna N/A N/A N/A 41735331
    1036684 9o3v:SM (2.2) BS01 rna N/A N/A N/A 41735331
    1036685 9o3v:SN (2.2) BS01 rna N/A N/A N/A 41735331
    1036686 9o3v:SO (2.2) BS01 rna N/A N/A N/A 41735331
    1036687 9o3v:SP (2.2) BS01 rna N/A N/A N/A 41735331
    1036688 9o3v:SP (2.2) BS02 rna N/A N/A N/A 41735331
    1036689 9o3v:SQ (2.2) BS01 rna N/A N/A N/A 41735331
    1036690 9o3v:SR (2.2) BS01 rna N/A N/A N/A 41735331
    1036691 9o3v:SS (2.2) BS01 rna N/A N/A N/A 41735331
    1036692 9o3v:ST (2.2) BS01 rna N/A N/A N/A 41735331
    1036693 9o3v:SU (2.2) BS01 rna N/A N/A N/A 41735331
    1036694 9o3v:SW (2.2) BS01 rna N/A N/A N/A 41735331
    1036695 9o3v:SX (2.2) BS01 rna N/A N/A N/A 41735331
    1036696 9o3v:SY (2.2) BS01 rna N/A N/A N/A 41735331
    1036697 9o3v:SZ (2.2) BS01 rna N/A N/A N/A 41735331
    1036698 9o3v:SZ (2.2) BS02 rna N/A N/A N/A 41735331
    1036699 9o3v:Sa (2.2) BS01 rna N/A N/A N/A 41735331
    1036700 9o3v:Sa (2.2) BS02 ZN N/A N/A N/A 41735331
    1036701 9o3v:Sb (2.2) BS01 rna N/A N/A N/A 41735331
    1036702 9o3v:Sc (2.2) BS01 rna N/A N/A N/A 41735331
    1036703 9o3v:Sd (2.2) BS01 rna N/A N/A N/A 41735331
    1036704 9o3v:Sd (2.2) BS02 MG N/A N/A N/A 41735331
    1036705 9o3v:Sd (2.2) BS03 ZN N/A N/A N/A 41735331
    1036706 9o3v:Se (2.2) BS01 rna N/A N/A N/A 41735331
    1036707 9o3v:Sf (2.2) BS01 rna N/A N/A N/A 41735331
    1036708 9o3v:Sf (2.2) BS02 ZN N/A N/A N/A 41735331
    1036709 9o3v:Sg (2.2) BS01 rna N/A N/A N/A 41735331
    1036710 9o3w:LA (1.9) BS01 rna N/A GO:0002181 ... P62917 41735331
    1036711 9o3w:LA (1.9) BS02 rna N/A GO:0002181 ... P62917 41735331
    1036712 9o3w:LB (1.9) BS01 rna N/A GO:0002181 ... P39023 41735331
    1036713 9o3w:LC (1.9) BS01 rna N/A GO:0002181 ... P36578 41735331
    1036714 9o3w:LC (1.9) BS02 rna N/A GO:0002181 ... P36578 41735331
    1036715 9o3w:LC (1.9) BS03 MG N/A GO:0002181 ... P36578 41735331
    1036716 9o3w:LD (1.9) BS01 rna N/A GO:0000027 ... P46777 41735331
    1036717 9o3w:LD (1.9) BS02 rna N/A GO:0000027 ... P46777 41735331
    1036718 9o3w:LE (1.9) BS01 rna N/A GO:0002181 ... Q02878 41735331
    1036719 9o3w:LF (1.9) BS01 rna N/A GO:0000463 ... P18124 41735331
    1036720 9o3w:LF (1.9) BS02 rna N/A GO:0000463 ... P18124 41735331
    1036721 9o3w:LG (1.9) BS01 rna N/A GO:0000470 ... P62424 41735331
    1036722 9o3w:LG (1.9) BS02 rna N/A GO:0000470 ... P62424 41735331
    1036723 9o3w:LH (1.9) BS01 rna N/A GO:0002181 ... P32969 41735331
    1036724 9o3w:LI (1.9) BS01 rna N/A GO:0000122 ... P27635 41735331
    1036725 9o3w:LI (1.9) BS02 rna N/A GO:0000122 ... P27635 41735331
    1036726 9o3w:LJ (1.9) BS01 rna N/A GO:0000027 ... P62913 41735331
    1036727 9o3w:LJ (1.9) BS02 rna N/A GO:0000027 ... P62913 41735331
    1036728 9o3w:LJ (1.9) BS03 rna N/A GO:0000027 ... P62913 41735331
    1036729 9o3w:LL (1.9) BS01 rna N/A GO:0002181 ... P26373 41735331
    1036730 9o3w:LL (1.9) BS02 rna N/A GO:0002181 ... P26373 41735331
    1036731 9o3w:LL (1.9) BS03 MG N/A GO:0002181 ... P26373 41735331
    1036732 9o3w:LM (1.9) BS01 rna N/A GO:0002181 ... P50914 41735331
    1036733 9o3w:LN (1.9) BS01 rna N/A GO:0002181 ... P61313 41735331
    1036734 9o3w:LN (1.9) BS02 rna N/A GO:0002181 ... P61313 41735331
    1036735 9o3w:LO (1.9) BS01 rna N/A GO:0002181 ... P40429 41735331
    1036736 9o3w:LP (1.9) BS01 rna N/A GO:0002181 ... P18621 41735331
    1036737 9o3w:LP (1.9) BS02 rna N/A GO:0002181 ... P18621 41735331
    1036738 9o3w:LP (1.9) BS03 peptide N/A GO:0002181 ... P18621 41735331
    1036739 9o3w:LQ (1.9) BS01 rna N/A GO:0002181 ... Q07020 41735331
    1036740 9o3w:LR (1.9) BS01 rna N/A GO:0002181 ... P84098 41735331
    1036741 9o3w:LR (1.9) BS02 rna N/A GO:0002181 ... P84098 41735331
    1036742 9o3w:LS (1.9) BS01 rna N/A GO:0002181 ... Q02543 41735331
    1036743 9o3w:LS (1.9) BS02 rna N/A GO:0002181 ... Q02543 41735331
    1036744 9o3w:LT (1.9) BS01 rna N/A GO:0001650 ... P46778 41735331
    1036745 9o3w:LT (1.9) BS02 rna N/A GO:0001650 ... P46778 41735331
    1036746 9o3w:LU (1.9) BS01 rna N/A GO:0002181 ... P35268 41735331
    1036747 9o3w:LV (1.9) BS01 rna N/A GO:0000122 ... P62829 41735331
    1036748 9o3w:LW (1.9) BS01 rna N/A GO:0002181 ... P83731 41735331
    1036749 9o3w:LW (1.9) BS02 rna N/A GO:0002181 ... P83731 41735331
    1036750 9o3w:LX (1.9) BS01 rna N/A GO:0002181 ... P62750 41735331
    1036751 9o3w:LX (1.9) BS02 rna N/A GO:0002181 ... P62750 41735331
    1036752 9o3w:LY (1.9) BS01 rna N/A GO:0002181 ... P61254 41735331
    1036753 9o3w:LY (1.9) BS02 rna N/A GO:0002181 ... P61254 41735331
    1036754 9o3w:LZ (1.9) BS01 rna N/A GO:0002181 ... P61353 41735331
    1036755 9o3w:La (1.9) BS01 rna N/A GO:0002181 ... P46776 41735331
    1036756 9o3w:Lb (1.9) BS01 rna N/A GO:0002181 ... P47914 41735331
    1036757 9o3w:Lc (1.9) BS01 rna N/A GO:0002181 ... P62888 41735331
    1036758 9o3w:Ld (1.9) BS01 rna N/A GO:0002181 ... P62899 41735331
    1036759 9o3w:Le (1.9) BS01 rna N/A GO:0002181 ... P62910 41735331
    1036760 9o3w:Lf (1.9) BS01 rna N/A GO:0002181 ... P18077 41735331
    1036761 9o3w:Lg (1.9) BS01 rna N/A GO:0002181 ... P49207 41735331
    1036762 9o3w:Lg (1.9) BS02 ZN N/A GO:0002181 ... P49207 41735331
    1036763 9o3w:Lh (1.9) BS01 rna N/A GO:0000463 ... P42766 41735331
    1036764 9o3w:Lh (1.9) BS02 rna N/A GO:0000463 ... P42766 41735331
    1036765 9o3w:Li (1.9) BS01 rna N/A GO:0002181 ... Q9Y3U8 41735331
    1036766 9o3w:Lj (1.9) BS01 rna N/A GO:0000448 ... P61927 41735331
    1036767 9o3w:Lj (1.9) BS02 rna N/A GO:0000448 ... P61927 41735331
    1036768 9o3w:Lj (1.9) BS03 ZN N/A GO:0000448 ... P61927 41735331
    1036769 9o3w:Lk (1.9) BS01 rna N/A GO:0002181 ... P63173 41735331
    1036770 9o3w:Ll (1.9) BS01 rna N/A GO:0002181 ... P62891 41735331
    1036771 9o3w:Ll (1.9) BS02 rna N/A GO:0002181 ... P62891 41735331
    1036772 9o3w:Lm (1.9) BS01 rna N/A GO:0002181 ... P62987 41735331
    1036773 9o3w:Lm (1.9) BS02 ZN N/A GO:0002181 ... P62987 41735331
    1036774 9o3w:Lo (1.9) BS01 rna N/A GO:0002181 ... P83881 41735331
    1036775 9o3w:Lo (1.9) BS02 rna N/A GO:0002181 ... P83881 41735331
    1036776 9o3w:Lo (1.9) BS03 MG N/A GO:0002181 ... P83881 41735331
    1036777 9o3w:Lo (1.9) BS04 ZN N/A GO:0002181 ... P83881 41735331
    1036778 9o3w:Lp (1.9) BS01 rna N/A GO:0002181 ... P61513 41735331
    1036779 9o3w:Lp (1.9) BS02 ZN N/A GO:0002181 ... P61513 41735331
    1036780 9o3w:Lr (1.9) BS01 rna N/A GO:0002181 ... P46779 41735331
    1036781 9o3w:SA (1.9) BS01 rna N/A GO:0000028 ... P08865 41735331
    1036782 9o3w:SB (1.9) BS01 rna N/A GO:0002181 ... P61247 41735331
    1036783 9o3w:SC (1.9) BS01 rna N/A GO:0002181 ... P15880 41735331
    1036784 9o3w:SD (1.9) BS01 rna N/A GO:0001228 ... P23396 41735331
    1036785 9o3w:SE (1.9) BS01 rna N/A GO:0002181 ... P62701 41735331
    1036786 9o3w:SF (1.9) BS01 rna N/A GO:0002181 ... P46782 41735331
    1036787 9o3w:SG (1.9) BS01 rna N/A GO:0002181 ... P62753 41735331
    1036788 9o3w:SH (1.9) BS01 rna N/A GO:0002181 ... P62081 41735331
    1036789 9o3w:SI (1.9) BS01 rna N/A GO:0002181 ... P62241 41735331
    1036790 9o3w:SI (1.9) BS02 rna N/A GO:0002181 ... P62241 41735331
    1036791 9o3w:SJ (1.9) BS01 rna N/A GO:0002181 ... P46781 41735331
    1036792 9o3w:SK (1.9) BS01 rna N/A GO:0002181 ... P46783 41735331
    1036793 9o3w:SL (1.9) BS01 rna N/A GO:0002181 ... P62280 41735331
    1036794 9o3w:SM (1.9) BS01 rna N/A GO:0002181 ... P25398 41735331
    1036795 9o3w:SN (1.9) BS01 rna N/A GO:0000462 ... P62277 41735331
    1036796 9o3w:SN (1.9) BS02 rna N/A GO:0000462 ... P62277 41735331
    1036797 9o3w:SO (1.9) BS01 rna N/A GO:0000028 ... P62263 41735331
    1036798 9o3w:SP (1.9) BS01 rna N/A GO:0000056 ... P62841 41735331
    1036799 9o3w:SP (1.9) BS02 rna N/A GO:0000056 ... P62841 41735331
    1036800 9o3w:SQ (1.9) BS01 rna N/A GO:0000462 ... P62249 41735331

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).