SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5189 5190 5191 5192 5193 5194 5195 5196 5197 5198 5199 5200 5201 5202 5203 5204 5205 5206 5207 5208 5209 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1039601 9or3:B (1.6) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039602 9or4:A (2.43) BS01 ZN N/A N/A P0DTC1 41557701
    1039603 9or4:A (2.43) BS02 A1CEE N/A N/A P0DTC1 41557701
    1039604 9or4:D (2.43) BS01 ZN N/A N/A P0DTC1 41557701
    1039605 9or4:D (2.43) BS02 A1CEE N/A N/A P0DTC1 41557701
    1039606 9or4:D (2.43) BS03 A1CEE N/A N/A P0DTC1 41557701
    1039607 9or7:A (1.5) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039608 9or7:B (1.5) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039609 9orb:A (1.5) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039610 9orb:B (1.5) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039611 9ore:L (4.13) BS01 BMA N/A N/A N/A 40666860
    1039612 9orh:A (2.0) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039613 9orh:B (2.0) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039614 9ork:AA1 (2.59) BS01 RET N/A N/A N/A 41229115
    1039615 9orl:A (2.3) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039616 9orl:B (2.3) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039617 9orn:A (1.75) BS01 FAD N/A GO:0004497 ... A0ABF7PIJ0 41133312
    1039618 9oro:A (1.32) BS01 BGC N/A N/A N/A N/A
    1039619 9oro:A (1.32) BS02 BGC N/A N/A N/A N/A
    1039620 9oro:A (1.32) BS03 BGC N/A N/A N/A N/A
    1039621 9ors:A (2.0) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039622 9ors:B (2.0) BS01 NXL N/A GO:0005576 ... A0A649V088 40720654
    1039623 9os2:B (2.5) BS01 ZN N/A N/A Q96SW2 41559416
    1039624 9os2:B (2.5) BS02 A1CED N/A N/A Q96SW2 41559416
    1039625 9os2:C (2.5) BS01 A1CED N/A GO:0003723 ... Q9UN86 41559416
    1039626 9os6:A (2.75) BS01 A1CEA N/A GO:0004672 ... P00533 40801664
    1039627 9osc:A (1.77) BS01 peptide N/A N/A Q13185 41575850
    1039628 9osw:A (2.67) BS01 A1CER N/A GO:0003676 ... O75417 40920169
    1039629 9osw:B (2.67) BS01 A1CER N/A GO:0003676 ... O75417 40920169
    1039630 9osw:C (2.67) BS01 A1CER N/A GO:0003676 ... O75417 40920169
    1039631 9osw:D (2.67) BS01 A1CER N/A GO:0003676 ... O75417 40920169
    1039632 9osy:A (2.9) BS01 A1CEQ N/A GO:0003676 ... O75417 40920169
    1039633 9osy:B (2.9) BS01 A1CEQ N/A GO:0003676 ... O75417 40920169
    1039634 9osy:C (2.9) BS01 A1CEQ N/A GO:0003676 ... O75417 40920169
    1039635 9osy:D (2.9) BS01 A1CEQ N/A GO:0003676 ... O75417 40920169
    1039636 9ot0:A (2.07) BS01 RET N/A N/A N/A 41229115
    1039637 9ot1:A (3.0) BS01 ZN N/A N/A Q96F46
    Q9NRM6
    41397964
    1039638 9ot1:B (3.0) BS01 ZN N/A N/A Q96F46
    Q9NRM6
    41397964
    1039639 9ot2:A (5.8) BS01 GTP N/A GO:0000226 ... P81947 40651469
    1039640 9ot2:B (5.8) BS01 GDP N/A GO:0000226 ... E1BJB1 40651469
    1039641 9ot2:B (5.8) BS02 TA1 N/A GO:0000226 ... E1BJB1 40651469
    1039642 9oti:A (3.5) BS01 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039643 9oti:A (3.5) BS02 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039644 9oti:A (3.5) BS03 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039645 9oti:A (3.5) BS04 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039646 9oti:B (3.5) BS01 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039647 9oti:B (3.5) BS02 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039648 9oti:B (3.5) BS03 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039649 9oti:B (3.5) BS04 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039650 9oti:C (3.5) BS01 ZN N/A GO:0005515 ... Q96S15 40715445
    1039651 9oti:C (3.5) BS02 ZN N/A GO:0005515 ... Q96S15 40715445
    1039652 9oti:C (3.5) BS03 ZN N/A GO:0005515 ... Q96S15 40715445
    1039653 9oti:C (3.5) BS04 ZN N/A GO:0005515 ... Q96S15 40715445
    1039654 9oti:D (3.5) BS01 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039655 9oti:D (3.5) BS02 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039656 9oti:D (3.5) BS03 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039657 9oti:L (3.5) BS01 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039658 9oti:L (3.5) BS02 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039659 9oti:L (3.5) BS03 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039660 9oti:L (3.5) BS04 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039661 9oti:M (3.5) BS01 ZN N/A GO:0005515 ... Q96S15 40715445
    1039662 9oti:M (3.5) BS02 ZN N/A GO:0005515 ... Q96S15 40715445
    1039663 9oti:M (3.5) BS03 ZN N/A GO:0005515 ... Q96S15 40715445
    1039664 9oti:M (3.5) BS04 ZN N/A GO:0005515 ... Q96S15 40715445
    1039665 9oti:N (3.5) BS01 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039666 9oti:N (3.5) BS02 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039667 9oti:N (3.5) BS03 ZN N/A GO:0005515 ... Q6PJI9 40715445
    1039668 9oti:T (3.5) BS01 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039669 9oti:T (3.5) BS02 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039670 9oti:T (3.5) BS03 ZN N/A GO:0005515 ... Q9NXC5 40715445
    1039671 9otl:A (1.846) BS01 MG N/A GO:0004360 ... V7IWJ0 40823914
    1039672 9otl:B (1.846) BS01 MG N/A GO:0004360 ... V7IWJ0 40823914
    1039673 9otl:D (1.846) BS01 MG N/A GO:0004360 ... V7IWJ0 40823914
    1039674 9otm:A (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039675 9otm:A (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039676 9otm:A (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039677 9otm:B (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039678 9otm:B (2.19) BS02 GLN N/A GO:0003824 ... P15104 40631248
    1039679 9otm:B (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039680 9otm:B (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039681 9otm:C (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039682 9otm:C (2.19) BS02 GLN N/A GO:0003824 ... P15104 40631248
    1039683 9otm:C (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039684 9otm:C (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039685 9otm:D (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039686 9otm:D (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039687 9otm:D (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039688 9otm:D (2.19) BS04 GLN N/A GO:0003824 ... P15104 40631248
    1039689 9otm:E (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039690 9otm:E (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039691 9otm:E (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039692 9otm:E (2.19) BS04 GLN N/A GO:0003824 ... P15104 40631248
    1039693 9otm:F (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039694 9otm:F (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039695 9otm:F (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039696 9otm:G (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039697 9otm:G (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039698 9otm:G (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039699 9otm:H (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039700 9otm:H (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039701 9otm:H (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039702 9otm:I (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039703 9otm:I (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039704 9otm:I (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039705 9otm:J (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039706 9otm:J (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039707 9otm:J (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039708 9otm:K (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039709 9otm:K (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039710 9otm:K (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039711 9otm:L (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039712 9otm:L (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039713 9otm:L (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039714 9otm:M (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039715 9otm:M (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039716 9otm:M (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039717 9otm:N (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039718 9otm:N (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039719 9otm:N (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039720 9otm:O (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039721 9otm:O (2.19) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039722 9otm:O (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039723 9otm:P (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039724 9otm:P (2.19) BS02 GLN N/A GO:0003824 ... P15104 40631248
    1039725 9otm:P (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039726 9otm:P (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039727 9otm:Q (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039728 9otm:Q (2.19) BS02 GLN N/A GO:0003824 ... P15104 40631248
    1039729 9otm:Q (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039730 9otm:Q (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039731 9otm:R (2.19) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039732 9otm:R (2.19) BS02 GLN N/A GO:0003824 ... P15104 40631248
    1039733 9otm:R (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039734 9otm:S (2.19) BS01 GLN N/A GO:0003824 ... P15104 40631248
    1039735 9otm:S (2.19) BS02 ATP N/A GO:0003824 ... P15104 40631248
    1039736 9otm:S (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039737 9otm:S (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039738 9otm:T (2.19) BS01 GLN N/A GO:0003824 ... P15104 40631248
    1039739 9otm:T (2.19) BS02 ATP N/A GO:0003824 ... P15104 40631248
    1039740 9otm:T (2.19) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039741 9otm:T (2.19) BS04 MG N/A GO:0003824 ... P15104 40631248
    1039742 9otn:A (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039743 9otn:A (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039744 9otn:A (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039745 9otn:B (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039746 9otn:B (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039747 9otn:B (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039748 9otn:C (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039749 9otn:C (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039750 9otn:C (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039751 9otn:D (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039752 9otn:D (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039753 9otn:D (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039754 9otn:E (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039755 9otn:E (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039756 9otn:E (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039757 9otn:F (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039758 9otn:F (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039759 9otn:F (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039760 9otn:G (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039761 9otn:G (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039762 9otn:G (2.11) BS03 ATP N/A GO:0003824 ... P15104 40631248
    1039763 9otn:H (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039764 9otn:H (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039765 9otn:H (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039766 9otn:I (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039767 9otn:I (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039768 9otn:I (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039769 9otn:J (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039770 9otn:J (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039771 9otn:J (2.11) BS03 ATP N/A GO:0003824 ... P15104 40631248
    1039772 9otn:K (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039773 9otn:K (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039774 9otn:K (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039775 9otn:L (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039776 9otn:L (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039777 9otn:L (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039778 9otn:M (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039779 9otn:M (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039780 9otn:M (2.11) BS03 ATP N/A GO:0003824 ... P15104 40631248
    1039781 9otn:N (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039782 9otn:N (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039783 9otn:N (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039784 9otn:O (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039785 9otn:O (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039786 9otn:O (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039787 9otn:P (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039788 9otn:P (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039789 9otn:P (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039790 9otn:Q (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039791 9otn:Q (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039792 9otn:Q (2.11) BS03 ATP N/A GO:0003824 ... P15104 40631248
    1039793 9otn:R (2.11) BS01 ATP N/A GO:0003824 ... P15104 40631248
    1039794 9otn:R (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248
    1039795 9otn:R (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039796 9otn:S (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039797 9otn:S (2.11) BS02 ATP N/A GO:0003824 ... P15104 40631248
    1039798 9otn:S (2.11) BS03 MG N/A GO:0003824 ... P15104 40631248
    1039799 9otn:T (2.11) BS01 MG N/A GO:0003824 ... P15104 40631248
    1039800 9otn:T (2.11) BS02 MG N/A GO:0003824 ... P15104 40631248

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).