SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1040801 9p6p:D (1.95) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    1040802 9p6s:A (2.61) BS01 MAN N/A N/A P08648 41809771
    1040803 9p6s:A (2.61) BS02 MN N/A N/A P08648 41809771
    1040804 9p6s:A (2.61) BS03 MN N/A N/A P08648 41809771
    1040805 9p6s:A (2.61) BS04 MN N/A N/A P08648 41809771
    1040806 9p6s:A (2.61) BS05 MN N/A N/A P08648 41809771
    1040807 9p6s:B (2.61) BS01 MN N/A N/A P05556 41809771
    1040808 9p6s:B (2.61) BS02 MN N/A N/A P05556 41809771
    1040809 9p6s:B (2.61) BS03 MN N/A N/A P05556 41809771
    1040810 9p6z:CI (2.97) BS01 rna N/A N/A P20290 41315256
    1040811 9p6z:LA (2.97) BS01 rna N/A GO:0002181 ... P62917 41315256
    1040812 9p6z:LA (2.97) BS02 MG N/A GO:0002181 ... P62917 41315256
    1040813 9p6z:LB (2.97) BS01 rna N/A GO:0002181 ... P39023 41315256
    1040814 9p6z:LC (2.97) BS01 rna N/A N/A P36578 41315256
    1040815 9p6z:LC (2.97) BS02 rna N/A N/A P36578 41315256
    1040816 9p6z:LD (2.97) BS01 rna N/A GO:0000027 ... P46777 41315256
    1040817 9p6z:LD (2.97) BS02 rna N/A GO:0000027 ... P46777 41315256
    1040818 9p6z:LE (2.97) BS01 rna N/A N/A Q02878 41315256
    1040819 9p6z:LF (2.97) BS01 rna N/A GO:0000463 ... P18124 41315256
    1040820 9p6z:LF (2.97) BS02 rna N/A GO:0000463 ... P18124 41315256
    1040821 9p6z:LG (2.97) BS01 rna N/A GO:0000470 ... P62424 41315256
    1040822 9p6z:LG (2.97) BS02 rna N/A GO:0000470 ... P62424 41315256
    1040823 9p6z:LH (2.97) BS01 rna N/A GO:0002181 ... P32969 41315256
    1040824 9p6z:LI (2.97) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1040825 9p6z:LI (2.97) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1040826 9p6z:LI (2.97) BS03 rna N/A GO:0000027 ... Q96L21 41315256
    1040827 9p6z:LJ (2.97) BS01 rna N/A GO:0000027 ... P62913 41315256
    1040828 9p6z:LJ (2.97) BS02 rna N/A GO:0000027 ... P62913 41315256
    1040829 9p6z:LL (2.97) BS01 rna N/A GO:0002181 ... P26373 41315256
    1040830 9p6z:LL (2.97) BS02 rna N/A GO:0002181 ... P26373 41315256
    1040831 9p6z:LM (2.97) BS01 rna N/A N/A P50914 41315256
    1040832 9p6z:LN (2.97) BS01 rna N/A GO:0002181 ... P61313 41315256
    1040833 9p6z:LN (2.97) BS02 rna N/A GO:0002181 ... P61313 41315256
    1040834 9p6z:LO (2.97) BS01 rna N/A GO:0002181 ... P40429 41315256
    1040835 9p6z:LP (2.97) BS01 rna N/A N/A P18621 41315256
    1040836 9p6z:LP (2.97) BS02 rna N/A N/A P18621 41315256
    1040837 9p6z:LQ (2.97) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1040838 9p6z:LR (2.97) BS01 rna N/A GO:0002181 ... P84098 41315256
    1040839 9p6z:LR (2.97) BS02 rna N/A GO:0002181 ... P84098 41315256
    1040840 9p6z:LS (2.97) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1040841 9p6z:LS (2.97) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1040842 9p6z:LT (2.97) BS01 rna N/A GO:0001650 ... P46778 41315256
    1040843 9p6z:LT (2.97) BS02 rna N/A GO:0001650 ... P46778 41315256
    1040844 9p6z:LU (2.97) BS01 rna N/A N/A Q7Z4W8 41315256
    1040845 9p6z:LV (2.97) BS01 rna N/A GO:0000122 ... P62829 41315256
    1040846 9p6z:LW (2.97) BS01 rna N/A N/A A0A994J4A5 41315256
    1040847 9p6z:LW (2.97) BS02 rna N/A N/A A0A994J4A5 41315256
    1040848 9p6z:LX (2.97) BS01 rna N/A N/A P62750 41315256
    1040849 9p6z:LX (2.97) BS02 rna N/A N/A P62750 41315256
    1040850 9p6z:LY (2.97) BS01 rna N/A GO:0002181 ... P61254 41315256
    1040851 9p6z:LY (2.97) BS02 rna N/A GO:0002181 ... P61254 41315256
    1040852 9p6z:LZ (2.97) BS01 rna N/A GO:0002181 ... P61353 41315256
    1040853 9p6z:La (2.97) BS01 rna N/A GO:0002181 ... P46776 41315256
    1040854 9p6z:Lb (2.97) BS01 rna N/A N/A P47914 41315256
    1040855 9p6z:Lc (2.97) BS01 rna N/A N/A P62888 41315256
    1040856 9p6z:Ld (2.97) BS01 rna N/A N/A P62899 41315256
    1040857 9p6z:Le (2.97) BS01 rna N/A GO:0002181 ... P62910 41315256
    1040858 9p6z:Le (2.97) BS02 MG N/A GO:0002181 ... P62910 41315256
    1040859 9p6z:Lf (2.97) BS01 rna N/A GO:0002181 ... P18077 41315256
    1040860 9p6z:Lg (2.97) BS01 rna N/A GO:0002181 ... P49207 41315256
    1040861 9p6z:Lg (2.97) BS02 ZN N/A GO:0002181 ... P49207 41315256
    1040862 9p6z:Lh (2.97) BS01 rna N/A GO:0000463 ... P42766 41315256
    1040863 9p6z:Lh (2.97) BS02 rna N/A GO:0000463 ... P42766 41315256
    1040864 9p6z:Li (2.97) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256
    1040865 9p6z:Lj (2.97) BS01 rna N/A N/A P61927 41315256
    1040866 9p6z:Lj (2.97) BS02 rna N/A N/A P61927 41315256
    1040867 9p6z:Lj (2.97) BS03 ZN N/A N/A P61927 41315256
    1040868 9p6z:Lk (2.97) BS01 rna N/A GO:0002181 ... P63173 41315256
    1040869 9p6z:Ll (2.97) BS01 rna N/A GO:0002181 ... P62891 41315256
    1040870 9p6z:Ll (2.97) BS02 rna N/A GO:0002181 ... P62891 41315256
    1040871 9p6z:Lm (2.97) BS01 rna N/A N/A P62987 41315256
    1040872 9p6z:Lm (2.97) BS02 ZN N/A N/A P62987 41315256
    1040873 9p6z:Lo (2.97) BS01 rna N/A GO:0002181 ... P83881 41315256
    1040874 9p6z:Lo (2.97) BS02 rna N/A GO:0002181 ... P83881 41315256
    1040875 9p6z:Lo (2.97) BS03 rna N/A GO:0002181 ... P83881 41315256
    1040876 9p6z:Lo (2.97) BS04 ZN N/A GO:0002181 ... P83881 41315256
    1040877 9p6z:Lp (2.97) BS01 rna N/A GO:0002181 ... P61513 41315256
    1040878 9p6z:Lp (2.97) BS02 ZN N/A GO:0002181 ... P61513 41315256
    1040879 9p6z:Lr (2.97) BS01 rna N/A GO:0002181 ... P46779 41315256
    1040880 9p6z:Ls (2.97) BS01 rna N/A N/A P05388 41315256
    1040881 9p6z:Lt (2.97) BS01 rna N/A N/A P30050 41315256
    1040882 9p6z:SA (2.97) BS01 rna N/A N/A P08865 41315256
    1040883 9p6z:SB (2.97) BS01 rna N/A N/A P61247 41315256
    1040884 9p6z:SC (2.97) BS01 rna N/A N/A P15880 41315256
    1040885 9p6z:SD (2.97) BS01 rna N/A GO:0001228 ... P23396 41315256
    1040886 9p6z:SE (2.97) BS01 rna N/A GO:0002181 ... P62701 41315256
    1040887 9p6z:SF (2.97) BS01 rna N/A GO:0002181 ... P46782 41315256
    1040888 9p6z:SG (2.97) BS01 rna N/A GO:0002181 ... P62753 41315256
    1040889 9p6z:SH (2.97) BS01 rna N/A GO:0002181 ... P62081 41315256
    1040890 9p6z:SI (2.97) BS01 rna N/A GO:0002181 ... P62241 41315256
    1040891 9p6z:SI (2.97) BS02 rna N/A GO:0002181 ... P62241 41315256
    1040892 9p6z:SJ (2.97) BS01 rna N/A GO:0002181 ... P46781 41315256
    1040893 9p6z:SK (2.97) BS01 rna N/A N/A P46783 41315256
    1040894 9p6z:SL (2.97) BS01 rna N/A GO:0002181 ... P62280 41315256
    1040895 9p6z:SM (2.97) BS01 rna N/A GO:0002181 ... P25398 41315256
    1040896 9p6z:SN (2.97) BS01 rna N/A GO:0000462 ... P62277 41315256
    1040897 9p6z:SN (2.97) BS02 rna N/A GO:0000462 ... P62277 41315256
    1040898 9p6z:SO (2.97) BS01 rna N/A GO:0000028 ... P62263 41315256
    1040899 9p6z:SP (2.97) BS01 rna N/A N/A P62841 41315256
    1040900 9p6z:SQ (2.97) BS01 rna N/A GO:0000462 ... P62249 41315256
    1040901 9p6z:SR (2.97) BS01 rna N/A GO:0002181 ... P08708 41315256
    1040902 9p6z:SS (2.97) BS01 rna N/A GO:0002181 ... P62269 41315256
    1040903 9p6z:ST (2.97) BS01 rna N/A GO:0000028 ... P39019 41315256
    1040904 9p6z:SU (2.97) BS01 rna N/A N/A P60866 41315256
    1040905 9p6z:SW (2.97) BS01 rna N/A GO:0002181 ... P62244 41315256
    1040906 9p6z:SX (2.97) BS01 rna N/A GO:0002181 ... P62266 41315256
    1040907 9p6z:SY (2.97) BS01 rna N/A GO:0002181 ... P62847 41315256
    1040908 9p6z:SZ (2.97) BS01 rna N/A N/A P62851 41315256
    1040909 9p6z:SZ (2.97) BS02 rna N/A N/A P62851 41315256
    1040910 9p6z:Sa (2.97) BS01 rna N/A N/A P62854 41315256
    1040911 9p6z:Sa (2.97) BS02 ZN N/A N/A P62854 41315256
    1040912 9p6z:Sb (2.97) BS01 rna N/A GO:0002181 ... P42677 41315256
    1040913 9p6z:Sc (2.97) BS01 rna N/A GO:0000028 ... P62857 41315256
    1040914 9p6z:Sd (2.97) BS01 rna N/A GO:0002181 ... P62273 41315256
    1040915 9p6z:Se (2.97) BS01 rna N/A N/A P62861 41315256
    1040916 9p6z:Sf (2.97) BS01 rna N/A N/A P62979 41315256
    1040917 9p6z:Sg (2.97) BS01 rna N/A GO:0001891 ... P63244 41315256
    1040918 9p72:CI (2.8) BS01 rna N/A N/A P20290 41315256
    1040919 9p72:LA (2.8) BS01 rna N/A GO:0002181 ... P62917 41315256
    1040920 9p72:LA (2.8) BS02 MG N/A GO:0002181 ... P62917 41315256
    1040921 9p72:LB (2.8) BS01 rna N/A GO:0002181 ... P39023 41315256
    1040922 9p72:LC (2.8) BS01 rna N/A N/A P36578 41315256
    1040923 9p72:LC (2.8) BS02 rna N/A N/A P36578 41315256
    1040924 9p72:LD (2.8) BS01 rna N/A GO:0000027 ... P46777 41315256
    1040925 9p72:LD (2.8) BS02 rna N/A GO:0000027 ... P46777 41315256
    1040926 9p72:LE (2.8) BS01 rna N/A N/A Q02878 41315256
    1040927 9p72:LF (2.8) BS01 rna N/A GO:0000463 ... P18124 41315256
    1040928 9p72:LF (2.8) BS02 rna N/A GO:0000463 ... P18124 41315256
    1040929 9p72:LG (2.8) BS01 rna N/A GO:0000470 ... P62424 41315256
    1040930 9p72:LG (2.8) BS02 rna N/A GO:0000470 ... P62424 41315256
    1040931 9p72:LH (2.8) BS01 rna N/A GO:0002181 ... P32969 41315256
    1040932 9p72:LI (2.8) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1040933 9p72:LI (2.8) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1040934 9p72:LI (2.8) BS03 rna N/A GO:0000027 ... Q96L21 41315256
    1040935 9p72:LJ (2.8) BS01 rna N/A GO:0000027 ... P62913 41315256
    1040936 9p72:LJ (2.8) BS02 rna N/A GO:0000027 ... P62913 41315256
    1040937 9p72:LJ (2.8) BS03 rna N/A GO:0000027 ... P62913 41315256
    1040938 9p72:LL (2.8) BS01 rna N/A GO:0002181 ... P26373 41315256
    1040939 9p72:LL (2.8) BS02 rna N/A GO:0002181 ... P26373 41315256
    1040940 9p72:LM (2.8) BS01 rna N/A N/A P50914 41315256
    1040941 9p72:LN (2.8) BS01 rna N/A GO:0002181 ... P61313 41315256
    1040942 9p72:LN (2.8) BS02 rna N/A GO:0002181 ... P61313 41315256
    1040943 9p72:LN (2.8) BS03 SPD N/A GO:0002181 ... P61313 41315256
    1040944 9p72:LO (2.8) BS01 rna N/A GO:0002181 ... P40429 41315256
    1040945 9p72:LP (2.8) BS01 rna N/A N/A P18621 41315256
    1040946 9p72:LP (2.8) BS02 rna N/A N/A P18621 41315256
    1040947 9p72:LQ (2.8) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1040948 9p72:LR (2.8) BS01 rna N/A GO:0002181 ... P84098 41315256
    1040949 9p72:LR (2.8) BS02 rna N/A GO:0002181 ... P84098 41315256
    1040950 9p72:LS (2.8) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1040951 9p72:LS (2.8) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1040952 9p72:LT (2.8) BS01 rna N/A GO:0001650 ... P46778 41315256
    1040953 9p72:LT (2.8) BS02 rna N/A GO:0001650 ... P46778 41315256
    1040954 9p72:LU (2.8) BS01 rna N/A N/A Q7Z4W8 41315256
    1040955 9p72:LV (2.8) BS01 rna N/A GO:0000122 ... P62829 41315256
    1040956 9p72:LW (2.8) BS01 rna N/A N/A A0A994J4A5 41315256
    1040957 9p72:LW (2.8) BS02 rna N/A N/A A0A994J4A5 41315256
    1040958 9p72:LX (2.8) BS01 rna N/A N/A P62750 41315256
    1040959 9p72:LX (2.8) BS02 rna N/A N/A P62750 41315256
    1040960 9p72:LY (2.8) BS01 rna N/A GO:0002181 ... P61254 41315256
    1040961 9p72:LY (2.8) BS02 rna N/A GO:0002181 ... P61254 41315256
    1040962 9p72:LZ (2.8) BS01 rna N/A GO:0002181 ... P61353 41315256
    1040963 9p72:La (2.8) BS01 rna N/A GO:0002181 ... P46776 41315256
    1040964 9p72:Lb (2.8) BS01 rna N/A N/A P47914 41315256
    1040965 9p72:Lc (2.8) BS01 rna N/A N/A P62888 41315256
    1040966 9p72:Ld (2.8) BS01 rna N/A N/A P62899 41315256
    1040967 9p72:Le (2.8) BS01 rna N/A GO:0002181 ... P62910 41315256
    1040968 9p72:Le (2.8) BS02 MG N/A GO:0002181 ... P62910 41315256
    1040969 9p72:Lf (2.8) BS01 rna N/A GO:0002181 ... P18077 41315256
    1040970 9p72:Lg (2.8) BS01 rna N/A GO:0002181 ... P49207 41315256
    1040971 9p72:Lh (2.8) BS01 rna N/A GO:0000463 ... P42766 41315256
    1040972 9p72:Lh (2.8) BS02 rna N/A GO:0000463 ... P42766 41315256
    1040973 9p72:Li (2.8) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256
    1040974 9p72:Lj (2.8) BS01 rna N/A N/A P61927 41315256
    1040975 9p72:Lj (2.8) BS02 rna N/A N/A P61927 41315256
    1040976 9p72:Lj (2.8) BS03 ZN N/A N/A P61927 41315256
    1040977 9p72:Lk (2.8) BS01 rna N/A GO:0002181 ... P63173 41315256
    1040978 9p72:Ll (2.8) BS01 rna N/A GO:0002181 ... P62891 41315256
    1040979 9p72:Ll (2.8) BS02 rna N/A GO:0002181 ... P62891 41315256
    1040980 9p72:Lm (2.8) BS01 rna N/A N/A P62987 41315256
    1040981 9p72:Lm (2.8) BS02 ZN N/A N/A P62987 41315256
    1040982 9p72:Lo (2.8) BS01 rna N/A GO:0002181 ... P83881 41315256
    1040983 9p72:Lo (2.8) BS02 rna N/A GO:0002181 ... P83881 41315256
    1040984 9p72:Lo (2.8) BS03 rna N/A GO:0002181 ... P83881 41315256
    1040985 9p72:Lo (2.8) BS04 ZN N/A GO:0002181 ... P83881 41315256
    1040986 9p72:Lp (2.8) BS01 rna N/A GO:0002181 ... P61513 41315256
    1040987 9p72:Lp (2.8) BS02 ZN N/A GO:0002181 ... P61513 41315256
    1040988 9p72:Lr (2.8) BS01 rna N/A GO:0002181 ... P46779 41315256
    1040989 9p72:Ls (2.8) BS01 rna N/A N/A P05388 41315256
    1040990 9p72:Lt (2.8) BS01 rna N/A N/A P30050 41315256
    1040991 9p72:SA (2.8) BS01 rna N/A N/A P08865 41315256
    1040992 9p72:SB (2.8) BS01 rna N/A N/A P61247 41315256
    1040993 9p72:SB (2.8) BS02 rna N/A N/A P61247 41315256
    1040994 9p72:SC (2.8) BS01 rna N/A N/A P15880 41315256
    1040995 9p72:SD (2.8) BS01 rna N/A GO:0001228 ... P23396 41315256
    1040996 9p72:SE (2.8) BS01 rna N/A GO:0002181 ... P62701 41315256
    1040997 9p72:SF (2.8) BS01 rna N/A GO:0002181 ... P46782 41315256
    1040998 9p72:SF (2.8) BS02 rna N/A GO:0002181 ... P46782 41315256
    1040999 9p72:SG (2.8) BS01 rna N/A GO:0002181 ... P62753 41315256
    1041000 9p72:SH (2.8) BS01 rna N/A GO:0002181 ... P62081 41315256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).