SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1041001 9p72:SI (2.8) BS01 rna N/A GO:0002181 ... P62241 41315256
    1041002 9p72:SI (2.8) BS02 rna N/A GO:0002181 ... P62241 41315256
    1041003 9p72:SJ (2.8) BS01 rna N/A GO:0002181 ... P46781 41315256
    1041004 9p72:SK (2.8) BS01 rna N/A N/A P46783 41315256
    1041005 9p72:SL (2.8) BS01 rna N/A GO:0002181 ... P62280 41315256
    1041006 9p72:SL (2.8) BS02 rna N/A GO:0002181 ... P62280 41315256
    1041007 9p72:SM (2.8) BS01 rna N/A GO:0002181 ... P25398 41315256
    1041008 9p72:SN (2.8) BS01 rna N/A GO:0000462 ... P62277 41315256
    1041009 9p72:SN (2.8) BS02 rna N/A GO:0000462 ... P62277 41315256
    1041010 9p72:SO (2.8) BS01 rna N/A GO:0000028 ... P62263 41315256
    1041011 9p72:SP (2.8) BS01 rna N/A N/A P62841 41315256
    1041012 9p72:SQ (2.8) BS01 rna N/A GO:0000462 ... P62249 41315256
    1041013 9p72:SR (2.8) BS01 rna N/A GO:0002181 ... P08708 41315256
    1041014 9p72:SS (2.8) BS01 rna N/A GO:0002181 ... P62269 41315256
    1041015 9p72:ST (2.8) BS01 rna N/A GO:0000028 ... P39019 41315256
    1041016 9p72:SU (2.8) BS01 rna N/A N/A P60866 41315256
    1041017 9p72:SW (2.8) BS01 rna N/A GO:0002181 ... P62244 41315256
    1041018 9p72:SX (2.8) BS01 rna N/A GO:0002181 ... P62266 41315256
    1041019 9p72:SY (2.8) BS01 rna N/A GO:0002181 ... P62847 41315256
    1041020 9p72:SZ (2.8) BS01 rna N/A N/A P62851 41315256
    1041021 9p72:Sa (2.8) BS01 rna N/A N/A P62854 41315256
    1041022 9p72:Sa (2.8) BS02 ZN N/A N/A P62854 41315256
    1041023 9p72:Sb (2.8) BS01 rna N/A GO:0002181 ... P42677 41315256
    1041024 9p72:Sc (2.8) BS01 rna N/A GO:0000028 ... P62857 41315256
    1041025 9p72:Sd (2.8) BS01 rna N/A GO:0002181 ... P62273 41315256
    1041026 9p72:Se (2.8) BS01 rna N/A N/A P62861 41315256
    1041027 9p72:Sf (2.8) BS01 rna N/A N/A P62979 41315256
    1041028 9p72:Sg (2.8) BS01 rna N/A GO:0001891 ... P63244 41315256
    1041029 9p73:CB (2.66) BS01 rna N/A GO:0002039 ... P13639 41315256
    1041030 9p73:CB (2.66) BS02 rna N/A GO:0002039 ... P13639 41315256
    1041031 9p73:CB (2.66) BS03 rna N/A GO:0002039 ... P13639 41315256
    1041032 9p73:CH (2.66) BS01 rna N/A N/A O60869 41315256
    1041033 9p73:CI (2.66) BS01 rna N/A N/A P20290 41315256
    1041034 9p73:LA (2.66) BS01 rna N/A GO:0002181 ... P62917 41315256
    1041035 9p73:LA (2.66) BS02 rna N/A GO:0002181 ... P62917 41315256
    1041036 9p73:LA (2.66) BS03 MG N/A GO:0002181 ... P62917 41315256
    1041037 9p73:LB (2.66) BS01 rna N/A GO:0002181 ... P39023 41315256
    1041038 9p73:LC (2.66) BS01 rna N/A N/A P36578 41315256
    1041039 9p73:LC (2.66) BS02 rna N/A N/A P36578 41315256
    1041040 9p73:LD (2.66) BS01 rna N/A GO:0000027 ... P46777 41315256
    1041041 9p73:LD (2.66) BS02 rna N/A GO:0000027 ... P46777 41315256
    1041042 9p73:LE (2.66) BS01 rna N/A N/A Q02878 41315256
    1041043 9p73:LF (2.66) BS01 rna N/A GO:0000463 ... P18124 41315256
    1041044 9p73:LF (2.66) BS02 rna N/A GO:0000463 ... P18124 41315256
    1041045 9p73:LG (2.66) BS01 rna N/A GO:0000470 ... P62424 41315256
    1041046 9p73:LG (2.66) BS02 rna N/A GO:0000470 ... P62424 41315256
    1041047 9p73:LH (2.66) BS01 rna N/A GO:0002181 ... P32969 41315256
    1041048 9p73:LI (2.66) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1041049 9p73:LI (2.66) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1041050 9p73:LI (2.66) BS03 rna N/A GO:0000027 ... Q96L21 41315256
    1041051 9p73:LJ (2.66) BS01 rna N/A GO:0000027 ... P62913 41315256
    1041052 9p73:LJ (2.66) BS02 rna N/A GO:0000027 ... P62913 41315256
    1041053 9p73:LL (2.66) BS01 rna N/A GO:0002181 ... P26373 41315256
    1041054 9p73:LL (2.66) BS02 rna N/A GO:0002181 ... P26373 41315256
    1041055 9p73:LM (2.66) BS01 rna N/A N/A P50914 41315256
    1041056 9p73:LN (2.66) BS01 rna N/A GO:0002181 ... P61313 41315256
    1041057 9p73:LN (2.66) BS02 rna N/A GO:0002181 ... P61313 41315256
    1041058 9p73:LN (2.66) BS03 SPD N/A GO:0002181 ... P61313 41315256
    1041059 9p73:LO (2.66) BS01 rna N/A GO:0002181 ... P40429 41315256
    1041060 9p73:LP (2.66) BS01 rna N/A N/A P18621 41315256
    1041061 9p73:LP (2.66) BS02 rna N/A N/A P18621 41315256
    1041062 9p73:LQ (2.66) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1041063 9p73:LR (2.66) BS01 rna N/A GO:0002181 ... P84098 41315256
    1041064 9p73:LR (2.66) BS02 rna N/A GO:0002181 ... P84098 41315256
    1041065 9p73:LS (2.66) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1041066 9p73:LS (2.66) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1041067 9p73:LT (2.66) BS01 rna N/A GO:0001650 ... P46778 41315256
    1041068 9p73:LT (2.66) BS02 rna N/A GO:0001650 ... P46778 41315256
    1041069 9p73:LU (2.66) BS01 rna N/A N/A Q7Z4W8 41315256
    1041070 9p73:LV (2.66) BS01 rna N/A GO:0000122 ... P62829 41315256
    1041071 9p73:LW (2.66) BS01 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041072 9p73:LW (2.66) BS02 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041073 9p73:LX (2.66) BS01 rna N/A N/A P62750 41315256
    1041074 9p73:LX (2.66) BS02 rna N/A N/A P62750 41315256
    1041075 9p73:LY (2.66) BS01 rna N/A GO:0002181 ... P61254 41315256
    1041076 9p73:LY (2.66) BS02 rna N/A GO:0002181 ... P61254 41315256
    1041077 9p73:LZ (2.66) BS01 rna N/A GO:0002181 ... P61353 41315256
    1041078 9p73:La (2.66) BS01 rna N/A GO:0002181 ... P46776 41315256
    1041079 9p73:Lb (2.66) BS01 rna N/A N/A P47914 41315256
    1041080 9p73:Lc (2.66) BS01 rna N/A N/A P62888 41315256
    1041081 9p73:Lc (2.66) BS02 rna N/A N/A P62888 41315256
    1041082 9p73:Ld (2.66) BS01 rna N/A N/A P62899 41315256
    1041083 9p73:Le (2.66) BS01 rna N/A GO:0002181 ... P62910 41315256
    1041084 9p73:Le (2.66) BS02 MG N/A GO:0002181 ... P62910 41315256
    1041085 9p73:Lf (2.66) BS01 rna N/A GO:0002181 ... P18077 41315256
    1041086 9p73:Lg (2.66) BS01 rna N/A GO:0002181 ... P49207 41315256
    1041087 9p73:Lg (2.66) BS02 ZN N/A GO:0002181 ... P49207 41315256
    1041088 9p73:Lh (2.66) BS01 rna N/A GO:0000463 ... P42766 41315256
    1041089 9p73:Lh (2.66) BS02 rna N/A GO:0000463 ... P42766 41315256
    1041090 9p73:Li (2.66) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256
    1041091 9p73:Lj (2.66) BS01 rna N/A N/A P61927 41315256
    1041092 9p73:Lj (2.66) BS02 rna N/A N/A P61927 41315256
    1041093 9p73:Lj (2.66) BS03 ZN N/A N/A P61927 41315256
    1041094 9p73:Lk (2.66) BS01 rna N/A GO:0002181 ... P63173 41315256
    1041095 9p73:Ll (2.66) BS01 rna N/A GO:0002181 ... P62891 41315256
    1041096 9p73:Ll (2.66) BS02 rna N/A GO:0002181 ... P62891 41315256
    1041097 9p73:Lm (2.66) BS01 rna N/A N/A P62987 41315256
    1041098 9p73:Lm (2.66) BS02 ZN N/A N/A P62987 41315256
    1041099 9p73:Lo (2.66) BS01 rna N/A GO:0002181 ... P83881 41315256
    1041100 9p73:Lo (2.66) BS02 rna N/A GO:0002181 ... P83881 41315256
    1041101 9p73:Lo (2.66) BS03 ZN N/A GO:0002181 ... P83881 41315256
    1041102 9p73:Lp (2.66) BS01 rna N/A GO:0002181 ... P61513 41315256
    1041103 9p73:Lp (2.66) BS02 ZN N/A GO:0002181 ... P61513 41315256
    1041104 9p73:Lr (2.66) BS01 rna N/A GO:0002181 ... P46779 41315256
    1041105 9p73:Ls (2.66) BS01 rna N/A N/A P05388 41315256
    1041106 9p73:Lt (2.66) BS01 rna N/A GO:0002181 ... P30050 41315256
    1041107 9p73:SA (2.66) BS01 rna N/A N/A P08865 41315256
    1041108 9p73:SB (2.66) BS01 rna N/A N/A P61247 41315256
    1041109 9p73:SB (2.66) BS02 rna N/A N/A P61247 41315256
    1041110 9p73:SC (2.66) BS01 rna N/A N/A P15880 41315256
    1041111 9p73:SD (2.66) BS01 rna N/A GO:0001228 ... P23396 41315256
    1041112 9p73:SE (2.66) BS01 rna N/A GO:0002181 ... P62701 41315256
    1041113 9p73:SF (2.66) BS01 rna N/A GO:0002181 ... P46782 41315256
    1041114 9p73:SG (2.66) BS01 rna N/A GO:0002181 ... P62753 41315256
    1041115 9p73:SH (2.66) BS01 rna N/A GO:0002181 ... P62081 41315256
    1041116 9p73:SI (2.66) BS01 rna N/A GO:0002181 ... P62241 41315256
    1041117 9p73:SI (2.66) BS02 rna N/A GO:0002181 ... P62241 41315256
    1041118 9p73:SJ (2.66) BS01 rna N/A GO:0002181 ... P46781 41315256
    1041119 9p73:SK (2.66) BS01 rna N/A N/A P46783 41315256
    1041120 9p73:SL (2.66) BS01 rna N/A GO:0002181 ... P62280 41315256
    1041121 9p73:SM (2.66) BS01 rna N/A GO:0002181 ... P25398 41315256
    1041122 9p73:SN (2.66) BS01 rna N/A GO:0000462 ... P62277 41315256
    1041123 9p73:SN (2.66) BS02 rna N/A GO:0000462 ... P62277 41315256
    1041124 9p73:SO (2.66) BS01 rna N/A GO:0000028 ... P62263 41315256
    1041125 9p73:SP (2.66) BS01 rna N/A N/A P62841 41315256
    1041126 9p73:SP (2.66) BS02 rna N/A N/A P62841 41315256
    1041127 9p73:SQ (2.66) BS01 rna N/A GO:0000462 ... P62249 41315256
    1041128 9p73:SR (2.66) BS01 rna N/A GO:0002181 ... P08708 41315256
    1041129 9p73:SS (2.66) BS01 rna N/A GO:0002181 ... P62269 41315256
    1041130 9p73:ST (2.66) BS01 rna N/A GO:0000028 ... P39019 41315256
    1041131 9p73:SU (2.66) BS01 rna N/A N/A P60866 41315256
    1041132 9p73:SW (2.66) BS01 rna N/A GO:0002181 ... P62244 41315256
    1041133 9p73:SX (2.66) BS01 rna N/A GO:0002181 ... P62266 41315256
    1041134 9p73:SY (2.66) BS01 rna N/A GO:0002181 ... P62847 41315256
    1041135 9p73:SZ (2.66) BS01 rna N/A N/A P62851 41315256
    1041136 9p73:Sa (2.66) BS01 rna N/A N/A P62854 41315256
    1041137 9p73:Sa (2.66) BS02 ZN N/A N/A P62854 41315256
    1041138 9p73:Sb (2.66) BS01 rna N/A GO:0002181 ... P42677 41315256
    1041139 9p73:Sc (2.66) BS01 rna N/A GO:0000028 ... P62857 41315256
    1041140 9p73:Sd (2.66) BS01 rna N/A GO:0002181 ... P62273 41315256
    1041141 9p73:Sf (2.66) BS01 rna N/A N/A P62979 41315256
    1041142 9p73:Sg (2.66) BS01 rna N/A GO:0001891 ... P63244 41315256
    1041143 9p76:CF (2.83) BS01 rna N/A GO:0000049 ... P68104 41315256
    1041144 9p76:CF (2.83) BS02 rna N/A GO:0000049 ... P68104 41315256
    1041145 9p76:CI (2.83) BS01 rna N/A N/A P20290 41315256
    1041146 9p76:LA (2.83) BS01 rna N/A GO:0002181 ... P62917 41315256
    1041147 9p76:LA (2.83) BS02 MG N/A GO:0002181 ... P62917 41315256
    1041148 9p76:LB (2.83) BS01 rna N/A GO:0002181 ... P39023 41315256
    1041149 9p76:LC (2.83) BS01 rna N/A N/A P36578 41315256
    1041150 9p76:LC (2.83) BS02 rna N/A N/A P36578 41315256
    1041151 9p76:LD (2.83) BS01 rna N/A GO:0000027 ... P46777 41315256
    1041152 9p76:LD (2.83) BS02 rna N/A GO:0000027 ... P46777 41315256
    1041153 9p76:LE (2.83) BS01 rna N/A N/A Q02878 41315256
    1041154 9p76:LF (2.83) BS01 rna N/A GO:0000463 ... P18124 41315256
    1041155 9p76:LF (2.83) BS02 rna N/A GO:0000463 ... P18124 41315256
    1041156 9p76:LG (2.83) BS01 rna N/A GO:0000470 ... P62424 41315256
    1041157 9p76:LG (2.83) BS02 rna N/A GO:0000470 ... P62424 41315256
    1041158 9p76:LH (2.83) BS01 rna N/A GO:0002181 ... P32969 41315256
    1041159 9p76:LI (2.83) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1041160 9p76:LI (2.83) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1041161 9p76:LI (2.83) BS03 rna N/A GO:0000027 ... Q96L21 41315256
    1041162 9p76:LJ (2.83) BS01 rna N/A GO:0000027 ... P62913 41315256
    1041163 9p76:LJ (2.83) BS02 rna N/A GO:0000027 ... P62913 41315256
    1041164 9p76:LJ (2.83) BS03 rna N/A GO:0000027 ... P62913 41315256
    1041165 9p76:LL (2.83) BS01 rna N/A GO:0002181 ... P26373 41315256
    1041166 9p76:LL (2.83) BS02 rna N/A GO:0002181 ... P26373 41315256
    1041167 9p76:LM (2.83) BS01 rna N/A N/A P50914 41315256
    1041168 9p76:LN (2.83) BS01 rna N/A GO:0002181 ... P61313 41315256
    1041169 9p76:LN (2.83) BS02 rna N/A GO:0002181 ... P61313 41315256
    1041170 9p76:LN (2.83) BS03 SPD N/A GO:0002181 ... P61313 41315256
    1041171 9p76:LO (2.83) BS01 rna N/A GO:0002181 ... P40429 41315256
    1041172 9p76:LP (2.83) BS01 rna N/A N/A P18621 41315256
    1041173 9p76:LP (2.83) BS02 rna N/A N/A P18621 41315256
    1041174 9p76:LQ (2.83) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1041175 9p76:LR (2.83) BS01 rna N/A GO:0002181 ... P84098 41315256
    1041176 9p76:LR (2.83) BS02 rna N/A GO:0002181 ... P84098 41315256
    1041177 9p76:LS (2.83) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1041178 9p76:LS (2.83) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1041179 9p76:LT (2.83) BS01 rna N/A GO:0001650 ... P46778 41315256
    1041180 9p76:LT (2.83) BS02 rna N/A GO:0001650 ... P46778 41315256
    1041181 9p76:LU (2.83) BS01 rna N/A N/A Q7Z4W8 41315256
    1041182 9p76:LV (2.83) BS01 rna N/A GO:0000122 ... P62829 41315256
    1041183 9p76:LW (2.83) BS01 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041184 9p76:LW (2.83) BS02 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041185 9p76:LX (2.83) BS01 rna N/A N/A P62750 41315256
    1041186 9p76:LX (2.83) BS02 rna N/A N/A P62750 41315256
    1041187 9p76:LY (2.83) BS01 rna N/A GO:0002181 ... P61254 41315256
    1041188 9p76:LY (2.83) BS02 rna N/A GO:0002181 ... P61254 41315256
    1041189 9p76:LZ (2.83) BS01 rna N/A GO:0002181 ... P61353 41315256
    1041190 9p76:La (2.83) BS01 rna N/A GO:0002181 ... P46776 41315256
    1041191 9p76:Lb (2.83) BS01 rna N/A N/A P47914 41315256
    1041192 9p76:Lc (2.83) BS01 rna N/A N/A P62888 41315256
    1041193 9p76:Ld (2.83) BS01 rna N/A N/A P62899 41315256
    1041194 9p76:Le (2.83) BS01 rna N/A GO:0002181 ... P62910 41315256
    1041195 9p76:Le (2.83) BS02 MG N/A GO:0002181 ... P62910 41315256
    1041196 9p76:Lf (2.83) BS01 rna N/A GO:0002181 ... P18077 41315256
    1041197 9p76:Lg (2.83) BS01 rna N/A GO:0002181 ... P49207 41315256
    1041198 9p76:Lg (2.83) BS02 ZN N/A GO:0002181 ... P49207 41315256
    1041199 9p76:Lh (2.83) BS01 rna N/A GO:0000463 ... P42766 41315256
    1041200 9p76:Lh (2.83) BS02 rna N/A GO:0000463 ... P42766 41315256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).