SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5199 5200 5201 5202 5203 5204 5205 5206 5207 5208 5209 5210 5211 5212 5213 5214 5215 5216 5217 5218 5219 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1041601 9p7c:LD (2.78) BS02 rna N/A GO:0000027 ... P46777 41315256
    1041602 9p7c:LE (2.78) BS01 rna N/A N/A Q02878 41315256
    1041603 9p7c:LF (2.78) BS01 rna N/A GO:0000463 ... P18124 41315256
    1041604 9p7c:LF (2.78) BS02 rna N/A GO:0000463 ... P18124 41315256
    1041605 9p7c:LG (2.78) BS01 rna N/A GO:0000470 ... P62424 41315256
    1041606 9p7c:LG (2.78) BS02 rna N/A GO:0000470 ... P62424 41315256
    1041607 9p7c:LH (2.78) BS01 rna N/A GO:0002181 ... P32969 41315256
    1041608 9p7c:LI (2.78) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1041609 9p7c:LI (2.78) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1041610 9p7c:LJ (2.78) BS01 rna N/A GO:0000027 ... P62913 41315256
    1041611 9p7c:LJ (2.78) BS02 rna N/A GO:0000027 ... P62913 41315256
    1041612 9p7c:LL (2.78) BS01 rna N/A GO:0002181 ... P26373 41315256
    1041613 9p7c:LL (2.78) BS02 rna N/A GO:0002181 ... P26373 41315256
    1041614 9p7c:LM (2.78) BS01 rna N/A N/A P50914 41315256
    1041615 9p7c:LN (2.78) BS01 rna N/A GO:0002181 ... P61313 41315256
    1041616 9p7c:LN (2.78) BS02 rna N/A GO:0002181 ... P61313 41315256
    1041617 9p7c:LO (2.78) BS01 rna N/A GO:0002181 ... P40429 41315256
    1041618 9p7c:LP (2.78) BS01 rna N/A N/A P18621 41315256
    1041619 9p7c:LP (2.78) BS02 rna N/A N/A P18621 41315256
    1041620 9p7c:LQ (2.78) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1041621 9p7c:LR (2.78) BS01 rna N/A GO:0002181 ... P84098 41315256
    1041622 9p7c:LR (2.78) BS02 rna N/A GO:0002181 ... P84098 41315256
    1041623 9p7c:LS (2.78) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1041624 9p7c:LS (2.78) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1041625 9p7c:LT (2.78) BS01 rna N/A GO:0001650 ... P46778 41315256
    1041626 9p7c:LT (2.78) BS02 rna N/A GO:0001650 ... P46778 41315256
    1041627 9p7c:LU (2.78) BS01 rna N/A N/A Q7Z4W8 41315256
    1041628 9p7c:LV (2.78) BS01 rna N/A GO:0000122 ... P62829 41315256
    1041629 9p7c:LV (2.78) BS02 rna N/A GO:0000122 ... P62829 41315256
    1041630 9p7c:LW (2.78) BS01 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041631 9p7c:LW (2.78) BS02 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041632 9p7c:LX (2.78) BS01 rna N/A N/A P62750 41315256
    1041633 9p7c:LX (2.78) BS02 rna N/A N/A P62750 41315256
    1041634 9p7c:LY (2.78) BS01 rna N/A GO:0002181 ... P61254 41315256
    1041635 9p7c:LY (2.78) BS02 rna N/A GO:0002181 ... P61254 41315256
    1041636 9p7c:LZ (2.78) BS01 rna N/A GO:0002181 ... P61353 41315256
    1041637 9p7c:La (2.78) BS01 rna N/A GO:0002181 ... P46776 41315256
    1041638 9p7c:Lb (2.78) BS01 rna N/A N/A P47914 41315256
    1041639 9p7c:Lc (2.78) BS01 rna N/A N/A P62888 41315256
    1041640 9p7c:Ld (2.78) BS01 rna N/A N/A P62899 41315256
    1041641 9p7c:Le (2.78) BS01 rna N/A GO:0002181 ... P62910 41315256
    1041642 9p7c:Le (2.78) BS02 MG N/A GO:0002181 ... P62910 41315256
    1041643 9p7c:Lf (2.78) BS01 rna N/A GO:0002181 ... P18077 41315256
    1041644 9p7c:Lg (2.78) BS01 rna N/A GO:0002181 ... P49207 41315256
    1041645 9p7c:Lg (2.78) BS02 ZN N/A GO:0002181 ... P49207 41315256
    1041646 9p7c:Lh (2.78) BS01 rna N/A GO:0000463 ... P42766 41315256
    1041647 9p7c:Lh (2.78) BS02 rna N/A GO:0000463 ... P42766 41315256
    1041648 9p7c:Li (2.78) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256
    1041649 9p7c:Lj (2.78) BS01 rna N/A N/A P61927 41315256
    1041650 9p7c:Lj (2.78) BS02 rna N/A N/A P61927 41315256
    1041651 9p7c:Lj (2.78) BS03 ZN N/A N/A P61927 41315256
    1041652 9p7c:Lk (2.78) BS01 rna N/A GO:0002181 ... P63173 41315256
    1041653 9p7c:Ll (2.78) BS01 rna N/A GO:0002181 ... P62891 41315256
    1041654 9p7c:Ll (2.78) BS02 rna N/A GO:0002181 ... P62891 41315256
    1041655 9p7c:Lm (2.78) BS01 rna N/A N/A P62987 41315256
    1041656 9p7c:Lm (2.78) BS02 ZN N/A N/A P62987 41315256
    1041657 9p7c:Lo (2.78) BS01 rna N/A GO:0002181 ... P83881 41315256
    1041658 9p7c:Lo (2.78) BS02 rna N/A GO:0002181 ... P83881 41315256
    1041659 9p7c:Lo (2.78) BS03 ZN N/A GO:0002181 ... P83881 41315256
    1041660 9p7c:Lp (2.78) BS01 rna N/A GO:0002181 ... P61513 41315256
    1041661 9p7c:Lp (2.78) BS02 ZN N/A GO:0002181 ... P61513 41315256
    1041662 9p7c:Lr (2.78) BS01 rna N/A GO:0002181 ... P46779 41315256
    1041663 9p7c:Ls (2.78) BS01 rna N/A N/A P05388 41315256
    1041664 9p7c:Lt (2.78) BS01 rna N/A GO:0002181 ... P30050 41315256
    1041665 9p7c:SA (2.78) BS01 rna N/A N/A P08865 41315256
    1041666 9p7c:SB (2.78) BS01 rna N/A N/A P61247 41315256
    1041667 9p7c:SC (2.78) BS01 rna N/A N/A P15880 41315256
    1041668 9p7c:SD (2.78) BS01 rna N/A GO:0001228 ... P23396 41315256
    1041669 9p7c:SE (2.78) BS01 rna N/A GO:0002181 ... P62701 41315256
    1041670 9p7c:SF (2.78) BS01 rna N/A GO:0002181 ... P46782 41315256
    1041671 9p7c:SG (2.78) BS01 rna N/A GO:0002181 ... P62753 41315256
    1041672 9p7c:SH (2.78) BS01 rna N/A GO:0002181 ... P62081 41315256
    1041673 9p7c:SI (2.78) BS01 rna N/A GO:0002181 ... P62241 41315256
    1041674 9p7c:SI (2.78) BS02 rna N/A GO:0002181 ... P62241 41315256
    1041675 9p7c:SJ (2.78) BS01 rna N/A GO:0002181 ... P46781 41315256
    1041676 9p7c:SK (2.78) BS01 rna N/A N/A P46783 41315256
    1041677 9p7c:SL (2.78) BS01 rna N/A GO:0002181 ... P62280 41315256
    1041678 9p7c:SM (2.78) BS01 rna N/A GO:0002181 ... P25398 41315256
    1041679 9p7c:SN (2.78) BS01 rna N/A GO:0000462 ... P62277 41315256
    1041680 9p7c:SN (2.78) BS02 rna N/A GO:0000462 ... P62277 41315256
    1041681 9p7c:SO (2.78) BS01 rna N/A GO:0000028 ... P62263 41315256
    1041682 9p7c:SP (2.78) BS01 rna N/A N/A P62841 41315256
    1041683 9p7c:SP (2.78) BS02 rna N/A N/A P62841 41315256
    1041684 9p7c:SQ (2.78) BS01 rna N/A GO:0000462 ... P62249 41315256
    1041685 9p7c:SR (2.78) BS01 rna N/A GO:0002181 ... P08708 41315256
    1041686 9p7c:SS (2.78) BS01 rna N/A GO:0002181 ... P62269 41315256
    1041687 9p7c:ST (2.78) BS01 rna N/A GO:0000028 ... P39019 41315256
    1041688 9p7c:SU (2.78) BS01 rna N/A N/A P60866 41315256
    1041689 9p7c:SW (2.78) BS01 rna N/A GO:0002181 ... P62244 41315256
    1041690 9p7c:SX (2.78) BS01 rna N/A GO:0002181 ... P62266 41315256
    1041691 9p7c:SY (2.78) BS01 rna N/A GO:0002181 ... P62847 41315256
    1041692 9p7c:SZ (2.78) BS01 rna N/A N/A P62851 41315256
    1041693 9p7c:Sa (2.78) BS01 rna N/A N/A P62854 41315256
    1041694 9p7c:Sa (2.78) BS02 ZN N/A N/A P62854 41315256
    1041695 9p7c:Sb (2.78) BS01 rna N/A GO:0002181 ... P42677 41315256
    1041696 9p7c:Sc (2.78) BS01 rna N/A GO:0000028 ... P62857 41315256
    1041697 9p7c:Sd (2.78) BS01 rna N/A GO:0002181 ... P62273 41315256
    1041698 9p7c:Se (2.78) BS01 rna N/A N/A P62861 41315256
    1041699 9p7c:Sf (2.78) BS01 rna N/A N/A P62979 41315256
    1041700 9p7c:Sg (2.78) BS01 rna N/A GO:0001891 ... P63244 41315256
    1041701 9p7d:CA (2.57) BS01 rna N/A GO:0003676 ... Q9UQ80 41315256
    1041702 9p7d:CA (2.57) BS02 rna N/A GO:0003676 ... Q9UQ80 41315256
    1041703 9p7d:CB (2.57) BS01 rna N/A GO:0002039 ... P13639 41315256
    1041704 9p7d:CB (2.57) BS02 rna N/A GO:0002039 ... P13639 41315256
    1041705 9p7d:CD (2.57) BS01 rna N/A GO:0003723 ... Q8NC51 41315256
    1041706 9p7d:CI (2.57) BS01 rna N/A N/A P20290 41315256
    1041707 9p7d:LA (2.57) BS01 rna N/A GO:0002181 ... P62917 41315256
    1041708 9p7d:LA (2.57) BS02 rna N/A GO:0002181 ... P62917 41315256
    1041709 9p7d:LA (2.57) BS03 MG N/A GO:0002181 ... P62917 41315256
    1041710 9p7d:LB (2.57) BS01 rna N/A GO:0002181 ... P39023 41315256
    1041711 9p7d:LC (2.57) BS01 rna N/A N/A P36578 41315256
    1041712 9p7d:LC (2.57) BS02 rna N/A N/A P36578 41315256
    1041713 9p7d:LD (2.57) BS01 rna N/A GO:0000027 ... P46777 41315256
    1041714 9p7d:LD (2.57) BS02 rna N/A GO:0000027 ... P46777 41315256
    1041715 9p7d:LE (2.57) BS01 rna N/A N/A Q02878 41315256
    1041716 9p7d:LF (2.57) BS01 rna N/A GO:0000463 ... P18124 41315256
    1041717 9p7d:LF (2.57) BS02 rna N/A GO:0000463 ... P18124 41315256
    1041718 9p7d:LG (2.57) BS01 rna N/A GO:0000470 ... P62424 41315256
    1041719 9p7d:LG (2.57) BS02 rna N/A GO:0000470 ... P62424 41315256
    1041720 9p7d:LH (2.57) BS01 rna N/A GO:0002181 ... P32969 41315256
    1041721 9p7d:LI (2.57) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1041722 9p7d:LI (2.57) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1041723 9p7d:LJ (2.57) BS01 rna N/A GO:0000027 ... P62913 41315256
    1041724 9p7d:LJ (2.57) BS02 rna N/A GO:0000027 ... P62913 41315256
    1041725 9p7d:LL (2.57) BS01 rna N/A GO:0002181 ... P26373 41315256
    1041726 9p7d:LL (2.57) BS02 rna N/A GO:0002181 ... P26373 41315256
    1041727 9p7d:LM (2.57) BS01 rna N/A N/A P50914 41315256
    1041728 9p7d:LN (2.57) BS01 rna N/A GO:0002181 ... P61313 41315256
    1041729 9p7d:LN (2.57) BS02 rna N/A GO:0002181 ... P61313 41315256
    1041730 9p7d:LO (2.57) BS01 rna N/A GO:0002181 ... P40429 41315256
    1041731 9p7d:LP (2.57) BS01 rna N/A N/A P18621 41315256
    1041732 9p7d:LP (2.57) BS02 rna N/A N/A P18621 41315256
    1041733 9p7d:LQ (2.57) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1041734 9p7d:LR (2.57) BS01 rna N/A GO:0002181 ... P84098 41315256
    1041735 9p7d:LR (2.57) BS02 rna N/A GO:0002181 ... P84098 41315256
    1041736 9p7d:LS (2.57) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1041737 9p7d:LS (2.57) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1041738 9p7d:LT (2.57) BS01 rna N/A GO:0001650 ... P46778 41315256
    1041739 9p7d:LT (2.57) BS02 rna N/A GO:0001650 ... P46778 41315256
    1041740 9p7d:LU (2.57) BS01 rna N/A N/A Q7Z4W8 41315256
    1041741 9p7d:LV (2.57) BS01 rna N/A GO:0000122 ... P62829 41315256
    1041742 9p7d:LW (2.57) BS01 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041743 9p7d:LW (2.57) BS02 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1041744 9p7d:LX (2.57) BS01 rna N/A N/A P62750 41315256
    1041745 9p7d:LX (2.57) BS02 rna N/A N/A P62750 41315256
    1041746 9p7d:LY (2.57) BS01 rna N/A GO:0002181 ... P61254 41315256
    1041747 9p7d:LY (2.57) BS02 rna N/A GO:0002181 ... P61254 41315256
    1041748 9p7d:LZ (2.57) BS01 rna N/A GO:0002181 ... P61353 41315256
    1041749 9p7d:La (2.57) BS01 rna N/A GO:0002181 ... P46776 41315256
    1041750 9p7d:Lb (2.57) BS01 rna N/A N/A P47914 41315256
    1041751 9p7d:Lc (2.57) BS01 rna N/A N/A P62888 41315256
    1041752 9p7d:Ld (2.57) BS01 rna N/A N/A P62899 41315256
    1041753 9p7d:Le (2.57) BS01 rna N/A GO:0002181 ... P62910 41315256
    1041754 9p7d:Le (2.57) BS02 MG N/A GO:0002181 ... P62910 41315256
    1041755 9p7d:Lf (2.57) BS01 rna N/A GO:0002181 ... P18077 41315256
    1041756 9p7d:Lg (2.57) BS01 rna N/A GO:0002181 ... P49207 41315256
    1041757 9p7d:Lg (2.57) BS02 ZN N/A GO:0002181 ... P49207 41315256
    1041758 9p7d:Lh (2.57) BS01 rna N/A GO:0000463 ... P42766 41315256
    1041759 9p7d:Lh (2.57) BS02 rna N/A GO:0000463 ... P42766 41315256
    1041760 9p7d:Li (2.57) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256
    1041761 9p7d:Lj (2.57) BS01 rna N/A N/A P61927 41315256
    1041762 9p7d:Lj (2.57) BS02 rna N/A N/A P61927 41315256
    1041763 9p7d:Lj (2.57) BS03 ZN N/A N/A P61927 41315256
    1041764 9p7d:Lk (2.57) BS01 rna N/A GO:0002181 ... P63173 41315256
    1041765 9p7d:Ll (2.57) BS01 rna N/A GO:0002181 ... P62891 41315256
    1041766 9p7d:Ll (2.57) BS02 rna N/A GO:0002181 ... P62891 41315256
    1041767 9p7d:Lm (2.57) BS01 rna N/A N/A P62987 41315256
    1041768 9p7d:Lm (2.57) BS02 ZN N/A N/A P62987 41315256
    1041769 9p7d:Lo (2.57) BS01 rna N/A GO:0002181 ... P83881 41315256
    1041770 9p7d:Lo (2.57) BS02 rna N/A GO:0002181 ... P83881 41315256
    1041771 9p7d:Lo (2.57) BS03 ZN N/A GO:0002181 ... P83881 41315256
    1041772 9p7d:Lp (2.57) BS01 rna N/A GO:0002181 ... P61513 41315256
    1041773 9p7d:Lp (2.57) BS02 ZN N/A GO:0002181 ... P61513 41315256
    1041774 9p7d:Lr (2.57) BS01 rna N/A GO:0002181 ... P46779 41315256
    1041775 9p7d:Ls (2.57) BS01 rna N/A N/A P05388 41315256
    1041776 9p7d:Lt (2.57) BS01 rna N/A GO:0002181 ... P30050 41315256
    1041777 9p7d:SA (2.57) BS01 rna N/A N/A P08865 41315256
    1041778 9p7d:SB (2.57) BS01 rna N/A N/A P61247 41315256
    1041779 9p7d:SC (2.57) BS01 rna N/A N/A P15880 41315256
    1041780 9p7d:SD (2.57) BS01 rna N/A GO:0001228 ... P23396 41315256
    1041781 9p7d:SE (2.57) BS01 rna N/A GO:0002181 ... P62701 41315256
    1041782 9p7d:SF (2.57) BS01 rna N/A GO:0002181 ... P46782 41315256
    1041783 9p7d:SG (2.57) BS01 rna N/A GO:0002181 ... P62753 41315256
    1041784 9p7d:SH (2.57) BS01 rna N/A GO:0002181 ... P62081 41315256
    1041785 9p7d:SI (2.57) BS01 rna N/A GO:0002181 ... P62241 41315256
    1041786 9p7d:SI (2.57) BS02 rna N/A GO:0002181 ... P62241 41315256
    1041787 9p7d:SJ (2.57) BS01 rna N/A GO:0002181 ... P46781 41315256
    1041788 9p7d:SK (2.57) BS01 rna N/A N/A P46783 41315256
    1041789 9p7d:SL (2.57) BS01 rna N/A GO:0002181 ... P62280 41315256
    1041790 9p7d:SM (2.57) BS01 rna N/A GO:0002181 ... P25398 41315256
    1041791 9p7d:SN (2.57) BS01 rna N/A GO:0000462 ... P62277 41315256
    1041792 9p7d:SN (2.57) BS02 rna N/A GO:0000462 ... P62277 41315256
    1041793 9p7d:SO (2.57) BS01 rna N/A GO:0000028 ... P62263 41315256
    1041794 9p7d:SP (2.57) BS01 rna N/A N/A P62841 41315256
    1041795 9p7d:SP (2.57) BS02 rna N/A N/A P62841 41315256
    1041796 9p7d:SQ (2.57) BS01 rna N/A GO:0000462 ... P62249 41315256
    1041797 9p7d:SR (2.57) BS01 rna N/A GO:0002181 ... P08708 41315256
    1041798 9p7d:SS (2.57) BS01 rna N/A GO:0002181 ... P62269 41315256
    1041799 9p7d:ST (2.57) BS01 rna N/A GO:0000028 ... P39019 41315256
    1041800 9p7d:SU (2.57) BS01 rna N/A N/A P60866 41315256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).