SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1045201 9pga:R (3.98) BS02 dna N/A N/A N/A N/A
    1045202 9pga:R (3.98) BS03 dna N/A N/A N/A N/A
    1045203 9pgf:0 (2.93) BS01 rna N/A N/A N/A 41663403
    1045204 9pgf:0 (2.93) BS02 ZN N/A N/A N/A 41663403
    1045205 9pgf:1 (2.93) BS01 rna N/A N/A N/A 41663403
    1045206 9pgf:2 (2.93) BS01 rna N/A N/A N/A 41663403
    1045207 9pgf:3 (2.93) BS01 rna N/A N/A N/A 41663403
    1045208 9pgf:4 (2.93) BS01 rna N/A N/A N/A 41663403
    1045209 9pgf:4 (2.93) BS02 ZN N/A N/A N/A 41663403
    1045210 9pgf:5 (2.93) BS01 rna N/A N/A N/A 41663403
    1045211 9pgf:6 (2.93) BS01 rna N/A N/A N/A 41663403
    1045212 9pgf:6 (2.93) BS02 rna N/A N/A N/A 41663403
    1045213 9pgf:8 (2.93) BS01 rna N/A N/A N/A 41663403
    1045214 9pgf:8 (2.93) BS02 rna N/A N/A N/A 41663403
    1045215 9pgf:8 (2.93) BS03 rna N/A N/A N/A 41663403
    1045216 9pgf:9 (2.93) BS01 rna N/A N/A N/A 41663403
    1045217 9pgf:A0 (2.93) BS01 rna N/A N/A N/A 41663403
    1045218 9pgf:A1 (2.93) BS01 rna N/A N/A N/A 41663403
    1045219 9pgf:A2 (2.93) BS01 rna N/A N/A N/A 41663403
    1045220 9pgf:A3 (2.93) BS01 rna N/A N/A N/A 41663403
    1045221 9pgf:A4 (2.93) BS01 rna N/A N/A N/A 41663403
    1045222 9pgf:AB (2.93) BS01 rna N/A N/A N/A 41663403
    1045223 9pgf:AB (2.93) BS02 MG N/A N/A N/A 41663403
    1045224 9pgf:AC (2.93) BS01 rna N/A N/A N/A 41663403
    1045225 9pgf:AD (2.93) BS01 rna N/A N/A N/A 41663403
    1045226 9pgf:AD (2.93) BS02 rna N/A N/A N/A 41663403
    1045227 9pgf:AE (2.93) BS01 rna N/A N/A N/A 41663403
    1045228 9pgf:AE (2.93) BS02 FES N/A N/A N/A 41663403
    1045229 9pgf:AF (2.93) BS01 rna N/A N/A N/A 41663403
    1045230 9pgf:AF (2.93) BS02 rna N/A N/A N/A 41663403
    1045231 9pgf:AG (2.93) BS01 rna N/A N/A N/A 41663403
    1045232 9pgf:AG (2.93) BS02 rna N/A N/A N/A 41663403
    1045233 9pgf:AG (2.93) BS03 rna N/A N/A N/A 41663403
    1045234 9pgf:AH (2.93) BS01 rna N/A N/A N/A 41663403
    1045235 9pgf:AI (2.93) BS01 rna N/A N/A N/A 41663403
    1045236 9pgf:AJ (2.93) BS01 rna N/A N/A N/A 41663403
    1045237 9pgf:AK (2.93) BS01 rna N/A N/A N/A 41663403
    1045238 9pgf:AL (2.93) BS01 rna N/A N/A N/A 41663403
    1045239 9pgf:AM (2.93) BS01 rna N/A N/A N/A 41663403
    1045240 9pgf:AM (2.93) BS02 FES N/A N/A N/A 41663403
    1045241 9pgf:AN (2.93) BS01 rna N/A N/A N/A 41663403
    1045242 9pgf:AO (2.93) BS01 rna N/A N/A N/A 41663403
    1045243 9pgf:AO (2.93) BS02 ZN N/A N/A N/A 41663403
    1045244 9pgf:AP (2.93) BS01 rna N/A N/A N/A 41663403
    1045245 9pgf:AP (2.93) BS02 FES N/A N/A N/A 41663403
    1045246 9pgf:AQ (2.93) BS01 rna N/A N/A N/A 41663403
    1045247 9pgf:AS (2.93) BS01 rna N/A N/A N/A 41663403
    1045248 9pgf:AT (2.93) BS01 rna N/A N/A N/A 41663403
    1045249 9pgf:AT (2.93) BS02 FES N/A N/A N/A 41663403
    1045250 9pgf:AU (2.93) BS01 rna N/A N/A N/A 41663403
    1045251 9pgf:AV (2.93) BS01 rna N/A N/A N/A 41663403
    1045252 9pgf:AX (2.93) BS01 rna N/A N/A N/A 41663403
    1045253 9pgf:AX (2.93) BS02 ATP N/A N/A N/A 41663403
    1045254 9pgf:AX (2.93) BS03 GDP N/A N/A N/A 41663403
    1045255 9pgf:AZ (2.93) BS01 rna N/A N/A N/A 41663403
    1045256 9pgf:C (2.93) BS01 rna N/A N/A N/A 41663403
    1045257 9pgf:D (2.93) BS01 rna N/A N/A N/A 41663403
    1045258 9pgf:E (2.93) BS01 rna N/A N/A N/A 41663403
    1045259 9pgf:F (2.93) BS01 rna N/A N/A N/A 41663403
    1045260 9pgf:H (2.93) BS01 rna N/A N/A N/A 41663403
    1045261 9pgf:I (2.93) BS01 rna N/A N/A N/A 41663403
    1045262 9pgf:I (2.93) BS02 FES N/A N/A N/A 41663403
    1045263 9pgf:J (2.93) BS01 rna N/A N/A N/A 41663403
    1045264 9pgf:K (2.93) BS01 rna N/A N/A N/A 41663403
    1045265 9pgf:L (2.93) BS01 rna N/A N/A N/A 41663403
    1045266 9pgf:L (2.93) BS02 rna N/A N/A N/A 41663403
    1045267 9pgf:M (2.93) BS01 rna N/A N/A N/A 41663403
    1045268 9pgf:N (2.93) BS01 rna N/A N/A N/A 41663403
    1045269 9pgf:O (2.93) BS01 rna N/A N/A N/A 41663403
    1045270 9pgf:OX (2.93) BS01 rna N/A N/A N/A 41663403
    1045271 9pgf:P (2.93) BS01 rna N/A N/A N/A 41663403
    1045272 9pgf:P (2.93) BS02 rna N/A N/A N/A 41663403
    1045273 9pgf:Q (2.93) BS01 rna N/A N/A N/A 41663403
    1045274 9pgf:R (2.93) BS01 rna N/A N/A N/A 41663403
    1045275 9pgf:S (2.93) BS01 rna N/A N/A N/A 41663403
    1045276 9pgf:T (2.93) BS01 rna N/A N/A N/A 41663403
    1045277 9pgf:U (2.93) BS01 rna N/A N/A N/A 41663403
    1045278 9pgf:V (2.93) BS01 rna N/A N/A N/A 41663403
    1045279 9pgf:W (2.93) BS01 rna N/A N/A N/A 41663403
    1045280 9pgf:X (2.93) BS01 rna N/A N/A N/A 41663403
    1045281 9pgf:Y (2.93) BS01 rna N/A N/A N/A 41663403
    1045282 9pgf:Z (2.93) BS01 rna N/A N/A N/A 41663403
    1045283 9pgf:a (2.93) BS01 rna N/A N/A N/A 41663403
    1045284 9pgf:b (2.93) BS01 rna N/A N/A N/A 41663403
    1045285 9pgf:c (2.93) BS01 rna N/A N/A N/A 41663403
    1045286 9pgf:d (2.93) BS01 rna N/A N/A N/A 41663403
    1045287 9pgf:e (2.93) BS01 rna N/A N/A N/A 41663403
    1045288 9pgf:e (2.93) BS02 VAL N/A N/A N/A 41663403
    1045289 9pgf:f (2.93) BS01 rna N/A N/A N/A 41663403
    1045290 9pgf:f (2.93) BS02 rna N/A N/A N/A 41663403
    1045291 9pgf:g (2.93) BS01 rna N/A N/A N/A 41663403
    1045292 9pgf:i (2.93) BS01 rna N/A N/A N/A 41663403
    1045293 9pgf:j (2.93) BS01 rna N/A N/A N/A 41663403
    1045294 9pgf:l (2.93) BS01 rna N/A N/A N/A 41663403
    1045295 9pgf:m (2.93) BS01 rna N/A N/A N/A 41663403
    1045296 9pgf:n (2.93) BS01 rna N/A N/A N/A 41663403
    1045297 9pgf:o (2.93) BS01 rna N/A N/A N/A 41663403
    1045298 9pgf:q (2.93) BS01 rna N/A N/A N/A 41663403
    1045299 9pgf:q (2.93) BS02 rna N/A N/A N/A 41663403
    1045300 9pgf:r (2.93) BS01 rna N/A N/A N/A 41663403
    1045301 9pgf:r (2.93) BS02 FES N/A N/A N/A 41663403
    1045302 9pgf:s (2.93) BS01 rna N/A N/A N/A 41663403
    1045303 9pgh:C (3.54) BS01 dna N/A N/A N/A N/A
    1045304 9pgh:D (3.54) BS01 dna N/A N/A N/A N/A
    1045305 9pgh:D (3.54) BS02 MG N/A N/A N/A N/A
    1045306 9pgh:D (3.54) BS03 ZN N/A N/A N/A N/A
    1045307 9pgh:D (3.54) BS04 ZN N/A N/A N/A N/A
    1045308 9pgh:F (3.54) BS01 dna N/A N/A N/A N/A
    1045309 9pgh:F (3.54) BS02 dna N/A N/A N/A N/A
    1045310 9pgi:0 (3.02) BS01 rna N/A N/A N/A 41663403
    1045311 9pgi:0 (3.02) BS02 ZN N/A N/A N/A 41663403
    1045312 9pgi:1 (3.02) BS01 rna N/A N/A N/A 41663403
    1045313 9pgi:2 (3.02) BS01 rna N/A N/A N/A 41663403
    1045314 9pgi:3 (3.02) BS01 rna N/A N/A N/A 41663403
    1045315 9pgi:4 (3.02) BS01 rna N/A N/A N/A 41663403
    1045316 9pgi:4 (3.02) BS02 ZN N/A N/A N/A 41663403
    1045317 9pgi:5 (3.02) BS01 rna N/A N/A N/A 41663403
    1045318 9pgi:6 (3.02) BS01 rna N/A N/A N/A 41663403
    1045319 9pgi:6 (3.02) BS02 rna N/A N/A N/A 41663403
    1045320 9pgi:8 (3.02) BS01 rna N/A N/A N/A 41663403
    1045321 9pgi:8 (3.02) BS02 rna N/A N/A N/A 41663403
    1045322 9pgi:8 (3.02) BS03 rna N/A N/A N/A 41663403
    1045323 9pgi:8 (3.02) BS04 rna N/A N/A N/A 41663403
    1045324 9pgi:9 (3.02) BS01 rna N/A N/A N/A 41663403
    1045325 9pgi:A0 (3.02) BS01 rna N/A N/A N/A 41663403
    1045326 9pgi:A1 (3.02) BS01 rna N/A N/A N/A 41663403
    1045327 9pgi:A2 (3.02) BS01 rna N/A N/A N/A 41663403
    1045328 9pgi:A3 (3.02) BS01 rna N/A N/A N/A 41663403
    1045329 9pgi:A4 (3.02) BS01 rna N/A N/A N/A 41663403
    1045330 9pgi:AB (3.02) BS01 rna N/A N/A N/A 41663403
    1045331 9pgi:AB (3.02) BS02 MG N/A N/A N/A 41663403
    1045332 9pgi:AC (3.02) BS01 rna N/A N/A N/A 41663403
    1045333 9pgi:AD (3.02) BS01 rna N/A N/A N/A 41663403
    1045334 9pgi:AD (3.02) BS02 rna N/A N/A N/A 41663403
    1045335 9pgi:AE (3.02) BS01 rna N/A N/A N/A 41663403
    1045336 9pgi:AE (3.02) BS02 FES N/A N/A N/A 41663403
    1045337 9pgi:AF (3.02) BS01 rna N/A N/A N/A 41663403
    1045338 9pgi:AF (3.02) BS02 rna N/A N/A N/A 41663403
    1045339 9pgi:AF (3.02) BS03 rna N/A N/A N/A 41663403
    1045340 9pgi:AG (3.02) BS01 rna N/A N/A N/A 41663403
    1045341 9pgi:AG (3.02) BS02 rna N/A N/A N/A 41663403
    1045342 9pgi:AG (3.02) BS03 rna N/A N/A N/A 41663403
    1045343 9pgi:AH (3.02) BS01 rna N/A N/A N/A 41663403
    1045344 9pgi:AI (3.02) BS01 rna N/A N/A N/A 41663403
    1045345 9pgi:AJ (3.02) BS01 rna N/A N/A N/A 41663403
    1045346 9pgi:AK (3.02) BS01 rna N/A N/A N/A 41663403
    1045347 9pgi:AL (3.02) BS01 rna N/A N/A N/A 41663403
    1045348 9pgi:AL (3.02) BS02 NAD N/A N/A N/A 41663403
    1045349 9pgi:AM (3.02) BS01 rna N/A N/A N/A 41663403
    1045350 9pgi:AM (3.02) BS02 FES N/A N/A N/A 41663403
    1045351 9pgi:AN (3.02) BS01 rna N/A N/A N/A 41663403
    1045352 9pgi:AO (3.02) BS01 rna N/A N/A N/A 41663403
    1045353 9pgi:AO (3.02) BS02 ZN N/A N/A N/A 41663403
    1045354 9pgi:AP (3.02) BS01 rna N/A N/A N/A 41663403
    1045355 9pgi:AP (3.02) BS02 FES N/A N/A N/A 41663403
    1045356 9pgi:AQ (3.02) BS01 rna N/A N/A N/A 41663403
    1045357 9pgi:AS (3.02) BS01 rna N/A N/A N/A 41663403
    1045358 9pgi:AT (3.02) BS01 rna N/A N/A N/A 41663403
    1045359 9pgi:AT (3.02) BS02 FES N/A N/A N/A 41663403
    1045360 9pgi:AU (3.02) BS01 rna N/A N/A N/A 41663403
    1045361 9pgi:AV (3.02) BS01 rna N/A N/A N/A 41663403
    1045362 9pgi:AX (3.02) BS01 rna N/A N/A N/A 41663403
    1045363 9pgi:AX (3.02) BS02 ATP N/A N/A N/A 41663403
    1045364 9pgi:AX (3.02) BS03 GDP N/A N/A N/A 41663403
    1045365 9pgi:AZ (3.02) BS01 rna N/A N/A N/A 41663403
    1045366 9pgi:C (3.02) BS01 rna N/A N/A N/A 41663403
    1045367 9pgi:C (3.02) BS02 rna N/A N/A N/A 41663403
    1045368 9pgi:D (3.02) BS01 rna N/A N/A N/A 41663403
    1045369 9pgi:E (3.02) BS01 rna N/A N/A N/A 41663403
    1045370 9pgi:F (3.02) BS01 rna N/A N/A N/A 41663403
    1045371 9pgi:H (3.02) BS01 rna N/A N/A N/A 41663403
    1045372 9pgi:I (3.02) BS01 rna N/A N/A N/A 41663403
    1045373 9pgi:J (3.02) BS01 rna N/A N/A N/A 41663403
    1045374 9pgi:K (3.02) BS01 rna N/A N/A N/A 41663403
    1045375 9pgi:L (3.02) BS01 rna N/A N/A N/A 41663403
    1045376 9pgi:L (3.02) BS02 rna N/A N/A N/A 41663403
    1045377 9pgi:M (3.02) BS01 rna N/A N/A N/A 41663403
    1045378 9pgi:N (3.02) BS01 rna N/A N/A N/A 41663403
    1045379 9pgi:O (3.02) BS01 rna N/A N/A N/A 41663403
    1045380 9pgi:OX (3.02) BS01 rna N/A N/A N/A 41663403
    1045381 9pgi:P (3.02) BS01 rna N/A N/A N/A 41663403
    1045382 9pgi:P (3.02) BS02 rna N/A N/A N/A 41663403
    1045383 9pgi:Q (3.02) BS01 rna N/A N/A N/A 41663403
    1045384 9pgi:R (3.02) BS01 rna N/A N/A N/A 41663403
    1045385 9pgi:S (3.02) BS01 rna N/A N/A N/A 41663403
    1045386 9pgi:T (3.02) BS01 rna N/A N/A N/A 41663403
    1045387 9pgi:U (3.02) BS01 rna N/A N/A N/A 41663403
    1045388 9pgi:V (3.02) BS01 rna N/A N/A N/A 41663403
    1045389 9pgi:W (3.02) BS01 rna N/A N/A N/A 41663403
    1045390 9pgi:X (3.02) BS01 rna N/A N/A N/A 41663403
    1045391 9pgi:Y (3.02) BS01 rna N/A N/A N/A 41663403
    1045392 9pgi:Z (3.02) BS01 rna N/A N/A N/A 41663403
    1045393 9pgi:a (3.02) BS01 rna N/A N/A N/A 41663403
    1045394 9pgi:b (3.02) BS01 rna N/A N/A N/A 41663403
    1045395 9pgi:c (3.02) BS01 rna N/A N/A N/A 41663403
    1045396 9pgi:d (3.02) BS01 rna N/A N/A N/A 41663403
    1045397 9pgi:e (3.02) BS01 rna N/A N/A N/A 41663403
    1045398 9pgi:e (3.02) BS02 VAL N/A N/A N/A 41663403
    1045399 9pgi:f (3.02) BS01 rna N/A N/A N/A 41663403
    1045400 9pgi:f (3.02) BS02 rna N/A N/A N/A 41663403

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).