SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1045401 9pgi:f (3.02) BS03 rna N/A N/A N/A 41663403
    1045402 9pgi:g (3.02) BS01 rna N/A N/A N/A 41663403
    1045403 9pgi:i (3.02) BS01 rna N/A N/A N/A 41663403
    1045404 9pgi:j (3.02) BS01 rna N/A N/A N/A 41663403
    1045405 9pgi:k (3.02) BS01 rna N/A N/A N/A 41663403
    1045406 9pgi:l (3.02) BS01 rna N/A N/A N/A 41663403
    1045407 9pgi:m (3.02) BS01 rna N/A N/A N/A 41663403
    1045408 9pgi:n (3.02) BS01 rna N/A N/A N/A 41663403
    1045409 9pgi:o (3.02) BS01 rna N/A N/A N/A 41663403
    1045410 9pgi:q (3.02) BS01 rna N/A N/A N/A 41663403
    1045411 9pgi:q (3.02) BS02 rna N/A N/A N/A 41663403
    1045412 9pgi:r (3.02) BS01 rna N/A N/A N/A 41663403
    1045413 9pgi:r (3.02) BS02 FES N/A N/A N/A 41663403
    1045414 9pgi:s (3.02) BS01 rna N/A N/A N/A 41663403
    1045415 9pgi:z (3.02) BS01 rna N/A N/A N/A 41663403
    1045416 9pgi:z (3.02) BS02 rna N/A N/A N/A 41663403
    1045417 9pgl:0 (2.9) BS01 rna N/A N/A N/A 41663403
    1045418 9pgl:0 (2.9) BS02 ZN N/A N/A N/A 41663403
    1045419 9pgl:1 (2.9) BS01 rna N/A N/A N/A 41663403
    1045420 9pgl:2 (2.9) BS01 rna N/A N/A N/A 41663403
    1045421 9pgl:3 (2.9) BS01 rna N/A N/A N/A 41663403
    1045422 9pgl:4 (2.9) BS01 rna N/A N/A N/A 41663403
    1045423 9pgl:4 (2.9) BS02 ZN N/A N/A N/A 41663403
    1045424 9pgl:5 (2.9) BS01 rna N/A N/A N/A 41663403
    1045425 9pgl:6 (2.9) BS01 rna N/A N/A N/A 41663403
    1045426 9pgl:6 (2.9) BS02 rna N/A N/A N/A 41663403
    1045427 9pgl:8 (2.9) BS01 rna N/A N/A N/A 41663403
    1045428 9pgl:8 (2.9) BS02 rna N/A N/A N/A 41663403
    1045429 9pgl:8 (2.9) BS03 rna N/A N/A N/A 41663403
    1045430 9pgl:8 (2.9) BS04 rna N/A N/A N/A 41663403
    1045431 9pgl:9 (2.9) BS01 rna N/A N/A N/A 41663403
    1045432 9pgl:A0 (2.9) BS01 rna N/A N/A N/A 41663403
    1045433 9pgl:A1 (2.9) BS01 rna N/A N/A N/A 41663403
    1045434 9pgl:A2 (2.9) BS01 rna N/A N/A N/A 41663403
    1045435 9pgl:A3 (2.9) BS01 rna N/A N/A N/A 41663403
    1045436 9pgl:A3 (2.9) BS02 rna N/A N/A N/A 41663403
    1045437 9pgl:A4 (2.9) BS01 rna N/A N/A N/A 41663403
    1045438 9pgl:AB (2.9) BS01 rna N/A N/A N/A 41663403
    1045439 9pgl:AB (2.9) BS02 MG N/A N/A N/A 41663403
    1045440 9pgl:AC (2.9) BS01 rna N/A N/A N/A 41663403
    1045441 9pgl:AD (2.9) BS01 rna N/A N/A N/A 41663403
    1045442 9pgl:AD (2.9) BS02 rna N/A N/A N/A 41663403
    1045443 9pgl:AE (2.9) BS01 rna N/A N/A N/A 41663403
    1045444 9pgl:AE (2.9) BS02 FES N/A N/A N/A 41663403
    1045445 9pgl:AF (2.9) BS01 rna N/A N/A N/A 41663403
    1045446 9pgl:AF (2.9) BS02 rna N/A N/A N/A 41663403
    1045447 9pgl:AG (2.9) BS01 rna N/A N/A N/A 41663403
    1045448 9pgl:AG (2.9) BS02 rna N/A N/A N/A 41663403
    1045449 9pgl:AG (2.9) BS03 rna N/A N/A N/A 41663403
    1045450 9pgl:AH (2.9) BS01 rna N/A N/A N/A 41663403
    1045451 9pgl:AI (2.9) BS01 rna N/A N/A N/A 41663403
    1045452 9pgl:AJ (2.9) BS01 rna N/A N/A N/A 41663403
    1045453 9pgl:AJ (2.9) BS02 rna N/A N/A N/A 41663403
    1045454 9pgl:AK (2.9) BS01 rna N/A N/A N/A 41663403
    1045455 9pgl:AL (2.9) BS01 rna N/A N/A N/A 41663403
    1045456 9pgl:AL (2.9) BS02 NAD N/A N/A N/A 41663403
    1045457 9pgl:AM (2.9) BS01 rna N/A N/A N/A 41663403
    1045458 9pgl:AM (2.9) BS02 FES N/A N/A N/A 41663403
    1045459 9pgl:AN (2.9) BS01 rna N/A N/A N/A 41663403
    1045460 9pgl:AO (2.9) BS01 rna N/A N/A N/A 41663403
    1045461 9pgl:AO (2.9) BS02 ZN N/A N/A N/A 41663403
    1045462 9pgl:AP (2.9) BS01 rna N/A N/A N/A 41663403
    1045463 9pgl:AP (2.9) BS02 FES N/A N/A N/A 41663403
    1045464 9pgl:AQ (2.9) BS01 rna N/A N/A N/A 41663403
    1045465 9pgl:AS (2.9) BS01 rna N/A N/A N/A 41663403
    1045466 9pgl:AT (2.9) BS01 rna N/A N/A N/A 41663403
    1045467 9pgl:AT (2.9) BS02 FES N/A N/A N/A 41663403
    1045468 9pgl:AU (2.9) BS01 rna N/A N/A N/A 41663403
    1045469 9pgl:AV (2.9) BS01 rna N/A N/A N/A 41663403
    1045470 9pgl:AX (2.9) BS01 rna N/A N/A N/A 41663403
    1045471 9pgl:AX (2.9) BS02 ATP N/A N/A N/A 41663403
    1045472 9pgl:AX (2.9) BS03 GDP N/A N/A N/A 41663403
    1045473 9pgl:AZ (2.9) BS01 rna N/A N/A N/A 41663403
    1045474 9pgl:C (2.9) BS01 rna N/A N/A N/A 41663403
    1045475 9pgl:C (2.9) BS02 rna N/A N/A N/A 41663403
    1045476 9pgl:D (2.9) BS01 rna N/A N/A N/A 41663403
    1045477 9pgl:E (2.9) BS01 rna N/A N/A N/A 41663403
    1045478 9pgl:F (2.9) BS01 rna N/A N/A N/A 41663403
    1045479 9pgl:H (2.9) BS01 rna N/A N/A N/A 41663403
    1045480 9pgl:I (2.9) BS01 rna N/A N/A N/A 41663403
    1045481 9pgl:I (2.9) BS02 FES N/A N/A N/A 41663403
    1045482 9pgl:J (2.9) BS01 rna N/A N/A N/A 41663403
    1045483 9pgl:K (2.9) BS01 rna N/A N/A N/A 41663403
    1045484 9pgl:L (2.9) BS01 rna N/A N/A N/A 41663403
    1045485 9pgl:L (2.9) BS02 rna N/A N/A N/A 41663403
    1045486 9pgl:M (2.9) BS01 rna N/A N/A N/A 41663403
    1045487 9pgl:N (2.9) BS01 rna N/A N/A N/A 41663403
    1045488 9pgl:O (2.9) BS01 rna N/A N/A N/A 41663403
    1045489 9pgl:OX (2.9) BS01 rna N/A N/A N/A 41663403
    1045490 9pgl:P (2.9) BS01 rna N/A N/A N/A 41663403
    1045491 9pgl:P (2.9) BS02 rna N/A N/A N/A 41663403
    1045492 9pgl:Q (2.9) BS01 rna N/A N/A N/A 41663403
    1045493 9pgl:R (2.9) BS01 rna N/A N/A N/A 41663403
    1045494 9pgl:S (2.9) BS01 rna N/A N/A N/A 41663403
    1045495 9pgl:T (2.9) BS01 rna N/A N/A N/A 41663403
    1045496 9pgl:U (2.9) BS01 rna N/A N/A N/A 41663403
    1045497 9pgl:V (2.9) BS01 rna N/A N/A N/A 41663403
    1045498 9pgl:W (2.9) BS01 rna N/A N/A N/A 41663403
    1045499 9pgl:X (2.9) BS01 rna N/A N/A N/A 41663403
    1045500 9pgl:Y (2.9) BS01 rna N/A N/A N/A 41663403
    1045501 9pgl:Z (2.9) BS01 rna N/A N/A N/A 41663403
    1045502 9pgl:a (2.9) BS01 rna N/A N/A N/A 41663403
    1045503 9pgl:b (2.9) BS01 rna N/A N/A N/A 41663403
    1045504 9pgl:c (2.9) BS01 rna N/A N/A N/A 41663403
    1045505 9pgl:d (2.9) BS01 rna N/A N/A N/A 41663403
    1045506 9pgl:e (2.9) BS01 rna N/A N/A N/A 41663403
    1045507 9pgl:e (2.9) BS02 VAL N/A N/A N/A 41663403
    1045508 9pgl:f (2.9) BS01 rna N/A N/A N/A 41663403
    1045509 9pgl:f (2.9) BS02 rna N/A N/A N/A 41663403
    1045510 9pgl:f (2.9) BS03 rna N/A N/A N/A 41663403
    1045511 9pgl:g (2.9) BS01 rna N/A N/A N/A 41663403
    1045512 9pgl:i (2.9) BS01 rna N/A N/A N/A 41663403
    1045513 9pgl:j (2.9) BS01 rna N/A N/A N/A 41663403
    1045514 9pgl:k (2.9) BS01 rna N/A N/A N/A 41663403
    1045515 9pgl:l (2.9) BS01 rna N/A N/A N/A 41663403
    1045516 9pgl:m (2.9) BS01 rna N/A N/A N/A 41663403
    1045517 9pgl:n (2.9) BS01 rna N/A N/A N/A 41663403
    1045518 9pgl:o (2.9) BS01 rna N/A N/A N/A 41663403
    1045519 9pgl:q (2.9) BS01 rna N/A N/A N/A 41663403
    1045520 9pgl:q (2.9) BS02 rna N/A N/A N/A 41663403
    1045521 9pgl:r (2.9) BS01 rna N/A N/A N/A 41663403
    1045522 9pgl:r (2.9) BS02 FES N/A N/A N/A 41663403
    1045523 9pgl:s (2.9) BS01 rna N/A N/A N/A 41663403
    1045524 9pgm:0 (3.18) BS01 rna N/A N/A N/A 41663403
    1045525 9pgm:0 (3.18) BS02 ZN N/A N/A N/A 41663403
    1045526 9pgm:1 (3.18) BS01 rna N/A N/A N/A 41663403
    1045527 9pgm:2 (3.18) BS01 rna N/A N/A N/A 41663403
    1045528 9pgm:3 (3.18) BS01 rna N/A N/A N/A 41663403
    1045529 9pgm:4 (3.18) BS01 rna N/A N/A N/A 41663403
    1045530 9pgm:4 (3.18) BS02 ZN N/A N/A N/A 41663403
    1045531 9pgm:5 (3.18) BS01 rna N/A N/A N/A 41663403
    1045532 9pgm:6 (3.18) BS01 rna N/A N/A N/A 41663403
    1045533 9pgm:6 (3.18) BS02 rna N/A N/A N/A 41663403
    1045534 9pgm:8 (3.18) BS01 rna N/A N/A N/A 41663403
    1045535 9pgm:8 (3.18) BS02 rna N/A N/A N/A 41663403
    1045536 9pgm:8 (3.18) BS03 rna N/A N/A N/A 41663403
    1045537 9pgm:9 (3.18) BS01 rna N/A N/A N/A 41663403
    1045538 9pgm:A0 (3.18) BS01 rna N/A N/A N/A 41663403
    1045539 9pgm:A1 (3.18) BS01 rna N/A N/A N/A 41663403
    1045540 9pgm:A2 (3.18) BS01 rna N/A N/A N/A 41663403
    1045541 9pgm:A3 (3.18) BS01 rna N/A N/A N/A 41663403
    1045542 9pgm:A4 (3.18) BS01 rna N/A N/A N/A 41663403
    1045543 9pgm:AB (3.18) BS01 rna N/A N/A N/A 41663403
    1045544 9pgm:AB (3.18) BS02 MG N/A N/A N/A 41663403
    1045545 9pgm:AC (3.18) BS01 rna N/A N/A N/A 41663403
    1045546 9pgm:AD (3.18) BS01 rna N/A N/A N/A 41663403
    1045547 9pgm:AD (3.18) BS02 rna N/A N/A N/A 41663403
    1045548 9pgm:AE (3.18) BS01 rna N/A N/A N/A 41663403
    1045549 9pgm:AE (3.18) BS02 FES N/A N/A N/A 41663403
    1045550 9pgm:AF (3.18) BS01 rna N/A N/A N/A 41663403
    1045551 9pgm:AF (3.18) BS02 rna N/A N/A N/A 41663403
    1045552 9pgm:AF (3.18) BS03 rna N/A N/A N/A 41663403
    1045553 9pgm:AG (3.18) BS01 rna N/A N/A N/A 41663403
    1045554 9pgm:AG (3.18) BS02 rna N/A N/A N/A 41663403
    1045555 9pgm:AG (3.18) BS03 rna N/A N/A N/A 41663403
    1045556 9pgm:AH (3.18) BS01 rna N/A N/A N/A 41663403
    1045557 9pgm:AI (3.18) BS01 rna N/A N/A N/A 41663403
    1045558 9pgm:AJ (3.18) BS01 rna N/A N/A N/A 41663403
    1045559 9pgm:AK (3.18) BS01 rna N/A N/A N/A 41663403
    1045560 9pgm:AL (3.18) BS01 rna N/A N/A N/A 41663403
    1045561 9pgm:AL (3.18) BS02 NAD N/A N/A N/A 41663403
    1045562 9pgm:AM (3.18) BS01 rna N/A N/A N/A 41663403
    1045563 9pgm:AM (3.18) BS02 FES N/A N/A N/A 41663403
    1045564 9pgm:AN (3.18) BS01 rna N/A N/A N/A 41663403
    1045565 9pgm:AO (3.18) BS01 rna N/A N/A N/A 41663403
    1045566 9pgm:AO (3.18) BS02 ZN N/A N/A N/A 41663403
    1045567 9pgm:AP (3.18) BS01 rna N/A N/A N/A 41663403
    1045568 9pgm:AP (3.18) BS02 FES N/A N/A N/A 41663403
    1045569 9pgm:AQ (3.18) BS01 rna N/A N/A N/A 41663403
    1045570 9pgm:AS (3.18) BS01 rna N/A N/A N/A 41663403
    1045571 9pgm:AT (3.18) BS01 rna N/A N/A N/A 41663403
    1045572 9pgm:AT (3.18) BS02 FES N/A N/A N/A 41663403
    1045573 9pgm:AU (3.18) BS01 rna N/A N/A N/A 41663403
    1045574 9pgm:AV (3.18) BS01 rna N/A N/A N/A 41663403
    1045575 9pgm:AX (3.18) BS01 rna N/A N/A N/A 41663403
    1045576 9pgm:AX (3.18) BS02 ATP N/A N/A N/A 41663403
    1045577 9pgm:AX (3.18) BS03 GDP N/A N/A N/A 41663403
    1045578 9pgm:AZ (3.18) BS01 rna N/A N/A N/A 41663403
    1045579 9pgm:D (3.18) BS01 rna N/A N/A N/A 41663403
    1045580 9pgm:E (3.18) BS01 rna N/A N/A N/A 41663403
    1045581 9pgm:F (3.18) BS01 rna N/A N/A N/A 41663403
    1045582 9pgm:H (3.18) BS01 rna N/A N/A N/A 41663403
    1045583 9pgm:I (3.18) BS01 rna N/A N/A N/A 41663403
    1045584 9pgm:I (3.18) BS02 FES N/A N/A N/A 41663403
    1045585 9pgm:J (3.18) BS01 rna N/A N/A N/A 41663403
    1045586 9pgm:K (3.18) BS01 rna N/A N/A N/A 41663403
    1045587 9pgm:L (3.18) BS01 rna N/A N/A N/A 41663403
    1045588 9pgm:L (3.18) BS02 rna N/A N/A N/A 41663403
    1045589 9pgm:M (3.18) BS01 rna N/A N/A N/A 41663403
    1045590 9pgm:N (3.18) BS01 rna N/A N/A N/A 41663403
    1045591 9pgm:O (3.18) BS01 rna N/A N/A N/A 41663403
    1045592 9pgm:OX (3.18) BS01 rna N/A N/A N/A 41663403
    1045593 9pgm:P (3.18) BS01 rna N/A N/A N/A 41663403
    1045594 9pgm:P (3.18) BS02 rna N/A N/A N/A 41663403
    1045595 9pgm:Q (3.18) BS01 rna N/A N/A N/A 41663403
    1045596 9pgm:R (3.18) BS01 rna N/A N/A N/A 41663403
    1045597 9pgm:S (3.18) BS01 rna N/A N/A N/A 41663403
    1045598 9pgm:T (3.18) BS01 rna N/A N/A N/A 41663403
    1045599 9pgm:U (3.18) BS01 rna N/A N/A N/A 41663403
    1045600 9pgm:V (3.18) BS01 rna N/A N/A N/A 41663403

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).