SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1045601 9pgm:W (3.18) BS01 rna N/A N/A N/A 41663403
    1045602 9pgm:X (3.18) BS01 rna N/A N/A N/A 41663403
    1045603 9pgm:Y (3.18) BS01 rna N/A N/A N/A 41663403
    1045604 9pgm:Z (3.18) BS01 rna N/A N/A N/A 41663403
    1045605 9pgm:a (3.18) BS01 rna N/A N/A N/A 41663403
    1045606 9pgm:b (3.18) BS01 rna N/A N/A N/A 41663403
    1045607 9pgm:c (3.18) BS01 rna N/A N/A N/A 41663403
    1045608 9pgm:d (3.18) BS01 rna N/A N/A N/A 41663403
    1045609 9pgm:e (3.18) BS01 rna N/A N/A N/A 41663403
    1045610 9pgm:e (3.18) BS02 VAL N/A N/A N/A 41663403
    1045611 9pgm:f (3.18) BS01 rna N/A N/A N/A 41663403
    1045612 9pgm:f (3.18) BS02 rna N/A N/A N/A 41663403
    1045613 9pgm:f (3.18) BS03 rna N/A N/A N/A 41663403
    1045614 9pgm:g (3.18) BS01 rna N/A N/A N/A 41663403
    1045615 9pgm:i (3.18) BS01 rna N/A N/A N/A 41663403
    1045616 9pgm:j (3.18) BS01 rna N/A N/A N/A 41663403
    1045617 9pgm:k (3.18) BS01 rna N/A N/A N/A 41663403
    1045618 9pgm:l (3.18) BS01 rna N/A N/A N/A 41663403
    1045619 9pgm:m (3.18) BS01 rna N/A N/A N/A 41663403
    1045620 9pgm:n (3.18) BS01 rna N/A N/A N/A 41663403
    1045621 9pgm:o (3.18) BS01 rna N/A N/A N/A 41663403
    1045622 9pgm:q (3.18) BS01 rna N/A N/A N/A 41663403
    1045623 9pgm:q (3.18) BS02 rna N/A N/A N/A 41663403
    1045624 9pgm:r (3.18) BS01 rna N/A N/A N/A 41663403
    1045625 9pgm:r (3.18) BS02 FES N/A N/A N/A 41663403
    1045626 9pgm:s (3.18) BS01 rna N/A N/A N/A 41663403
    1045627 9pgm:z (3.18) BS01 rna N/A N/A N/A 41663403
    1045628 9pgm:z (3.18) BS02 rna N/A N/A N/A 41663403
    1045629 9pgq:A (1.5) BS01 MG N/A GO:0006006 ... Q7VZB9 N/A
    1045630 9pgs:A (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045631 9pgs:B (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045632 9pgs:B (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045633 9pgs:C (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045634 9pgs:D (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045635 9pgs:E (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045636 9pgs:E (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045637 9pgs:F (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045638 9pgs:F (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045639 9pgs:G (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045640 9pgs:H (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045641 9pgs:H (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045642 9pgs:I (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045643 9pgs:J (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045644 9pgs:J (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045645 9pgs:K (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045646 9pgs:K (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045647 9pgs:L (2.4) BS01 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045648 9pgs:L (2.4) BS02 A1CH4 N/A GO:0016032 ... B6DRA0 41032707
    1045649 9pgt:A (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045650 9pgt:B (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045651 9pgt:B (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045652 9pgt:C (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045653 9pgt:D (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045654 9pgt:D (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045655 9pgt:E (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045656 9pgt:E (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045657 9pgt:F (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045658 9pgt:F (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045659 9pgt:G (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045660 9pgt:G (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045661 9pgt:H (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045662 9pgt:H (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045663 9pgt:I (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045664 9pgt:J (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045665 9pgt:J (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045666 9pgt:K (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045667 9pgt:K (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045668 9pgt:L (2.2) BS01 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045669 9pgt:L (2.2) BS02 A1CH5 N/A GO:0016032 ... B6DRA0 41032707
    1045670 9pgu:A (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045671 9pgu:B (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045672 9pgu:B (3.36) BS02 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045673 9pgu:C (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045674 9pgu:C (3.36) BS02 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045675 9pgu:D (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045676 9pgu:E (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045677 9pgu:E (3.36) BS02 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045678 9pgu:F (3.36) BS01 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045679 9pgu:F (3.36) BS02 A1CH6 N/A GO:0016032 ... B6DRA0 41032707
    1045680 9pgv:A (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045681 9pgv:A (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045682 9pgv:B (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045683 9pgv:C (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045684 9pgv:C (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045685 9pgv:D (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045686 9pgv:D (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045687 9pgv:E (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045688 9pgv:E (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045689 9pgv:F (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045690 9pgv:F (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045691 9pgv:G (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045692 9pgv:G (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045693 9pgv:H (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045694 9pgv:H (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045695 9pgv:I (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045696 9pgv:I (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045697 9pgv:J (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045698 9pgv:J (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045699 9pgv:K (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045700 9pgv:L (2.3) BS01 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045701 9pgv:L (2.3) BS02 A1CH7 N/A GO:0016032 ... B6DRA0 41032707
    1045702 9pgw:A (1.46) BS01 NDP N/A N/A Q8NFT2 N/A
    1045703 9pgx:A (1.46) BS01 NDP N/A N/A Q8NFT2 N/A
    1045704 9pgy:A (1.55) BS01 NDP N/A N/A Q8NFT2 N/A
    1045705 9pgz:A (2.6) BS01 ZN N/A N/A B2ZB02
    P06241
    41279480
    1045706 9pgz:A (2.6) BS02 ZN N/A N/A B2ZB02
    P06241
    41279480
    1045707 9ph4:E (3.0) BS01 ZN N/A GO:0000338 ... Q92905 41673158
    1045708 9ph4:E (3.0) BS02 A1CH3 N/A GO:0000338 ... Q92905 41673158
    1045709 9phd:C (1.59) BS01 peptide N/A N/A P03452 41413306
    1045710 9phd:C (1.59) BS02 FUC N/A N/A P03452 41413306
    1045711 9phd:D (1.59) BS01 peptide N/A N/A P03452 41413306
    1045712 9phg:A (1.479) BS01 NAP N/A GO:0008106 ... Q9UUN9 N/A
    1045713 9phg:B (1.479) BS01 NAP N/A GO:0008106 ... Q9UUN9 N/A
    1045714 9phq:A (2.87) BS01 peptide N/A N/A P03452 41413306
    1045715 9phq:B (2.87) BS01 peptide N/A N/A P03452 41413306
    1045716 9phr:A (1.801) BS01 9UM N/A N/A Q14145 41187500
    1045717 9phs:A (2.02) BS01 peptide N/A N/A P03452 41413306
    1045718 9phs:A (2.02) BS02 FUC N/A N/A P03452 41413306
    1045719 9phs:A (2.02) BS03 CA N/A N/A P03452 41413306
    1045720 9phs:B (2.02) BS01 peptide N/A N/A P03452 41413306
    1045721 9phs:C (2.02) BS01 peptide N/A N/A P03452 41413306
    1045722 9phs:C (2.02) BS02 FUC N/A N/A P03452 41413306
    1045723 9phs:C (2.02) BS03 CA N/A N/A P03452 41413306
    1045724 9phs:D (2.02) BS01 peptide N/A N/A P03452 41413306
    1045725 9phs:E (2.02) BS01 peptide N/A N/A P03452 41413306
    1045726 9phs:E (2.02) BS02 FUC N/A N/A P03452 41413306
    1045727 9phs:E (2.02) BS03 CA N/A N/A P03452 41413306
    1045728 9phs:F (2.02) BS01 peptide N/A N/A P03452 41413306
    1045729 9pht:A (2.76) BS01 peptide N/A N/A Q5EP31 41413306
    1045730 9pht:B (2.76) BS01 peptide N/A N/A Q5EP31 41413306
    1045731 9phw:A (1.99) BS01 OEX N/A GO:0005506 ... P16033 41237214
    1045732 9phw:A (1.99) BS02 FE2 N/A GO:0005506 ... P16033 41237214
    1045733 9phw:A (1.99) BS03 CL N/A GO:0005506 ... P16033 41237214
    1045734 9phw:A (1.99) BS04 CLA N/A GO:0005506 ... P16033 41237214
    1045735 9phw:A (1.99) BS05 CLA N/A GO:0005506 ... P16033 41237214
    1045736 9phw:A (1.99) BS06 PHO N/A GO:0005506 ... P16033 41237214
    1045737 9phw:A (1.99) BS07 CLA N/A GO:0005506 ... P16033 41237214
    1045738 9phw:A (1.99) BS08 BCT N/A GO:0005506 ... P16033 41237214
    1045739 9phw:A (1.99) BS09 CLA N/A GO:0005506 ... P16033 41237214
    1045740 9phw:A (1.99) BS10 CLA N/A GO:0005506 ... P16033 41237214
    1045741 9phw:A (1.99) BS11 PHO N/A GO:0005506 ... P16033 41237214
    1045742 9phw:B (1.99) BS01 CLA N/A GO:0009521 ... P05429 41237214
    1045743 9phw:B (1.99) BS02 CLA N/A GO:0009521 ... P05429 41237214
    1045744 9phw:B (1.99) BS03 CLA N/A GO:0009521 ... P05429 41237214
    1045745 9phw:B (1.99) BS04 CLA N/A GO:0009521 ... P05429 41237214
    1045746 9phw:B (1.99) BS05 CLA N/A GO:0009521 ... P05429 41237214
    1045747 9phw:B (1.99) BS06 CLA N/A GO:0009521 ... P05429 41237214
    1045748 9phw:B (1.99) BS07 CLA N/A GO:0009521 ... P05429 41237214
    1045749 9phw:B (1.99) BS08 CLA N/A GO:0009521 ... P05429 41237214
    1045750 9phw:B (1.99) BS09 CLA N/A GO:0009521 ... P05429 41237214
    1045751 9phw:B (1.99) BS10 CLA N/A GO:0009521 ... P05429 41237214
    1045752 9phw:B (1.99) BS11 CLA N/A GO:0009521 ... P05429 41237214
    1045753 9phw:B (1.99) BS12 CLA N/A GO:0009521 ... P05429 41237214
    1045754 9phw:B (1.99) BS13 CLA N/A GO:0009521 ... P05429 41237214
    1045755 9phw:B (1.99) BS14 CLA N/A GO:0009521 ... P05429 41237214
    1045756 9phw:B (1.99) BS15 CLA N/A GO:0009521 ... P05429 41237214
    1045757 9phw:B (1.99) BS16 CLA N/A GO:0009521 ... P05429 41237214
    1045758 9phw:C (1.99) BS01 OEX N/A GO:0005737 ... P09193 41237214
    1045759 9phw:C (1.99) BS02 CLA N/A GO:0005737 ... P09193 41237214
    1045760 9phw:C (1.99) BS03 CLA N/A GO:0005737 ... P09193 41237214
    1045761 9phw:C (1.99) BS04 CLA N/A GO:0005737 ... P09193 41237214
    1045762 9phw:C (1.99) BS05 CLA N/A GO:0005737 ... P09193 41237214
    1045763 9phw:C (1.99) BS06 CLA N/A GO:0005737 ... P09193 41237214
    1045764 9phw:C (1.99) BS07 CLA N/A GO:0005737 ... P09193 41237214
    1045765 9phw:C (1.99) BS08 CLA N/A GO:0005737 ... P09193 41237214
    1045766 9phw:C (1.99) BS09 CLA N/A GO:0005737 ... P09193 41237214
    1045767 9phw:C (1.99) BS10 CLA N/A GO:0005737 ... P09193 41237214
    1045768 9phw:C (1.99) BS11 CLA N/A GO:0005737 ... P09193 41237214
    1045769 9phw:C (1.99) BS12 CLA N/A GO:0005737 ... P09193 41237214
    1045770 9phw:C (1.99) BS13 CLA N/A GO:0005737 ... P09193 41237214
    1045771 9phw:C (1.99) BS14 CLA N/A GO:0005737 ... P09193 41237214
    1045772 9phw:D (1.99) BS01 FE2 N/A GO:0005506 ... P09192 41237214
    1045773 9phw:D (1.99) BS02 CLA N/A GO:0005506 ... P09192 41237214
    1045774 9phw:D (1.99) BS03 PHO N/A GO:0005506 ... P09192 41237214
    1045775 9phw:D (1.99) BS04 BCT N/A GO:0005506 ... P09192 41237214
    1045776 9phw:D (1.99) BS05 CLA N/A GO:0005506 ... P09192 41237214
    1045777 9phw:D (1.99) BS06 CLA N/A GO:0005506 ... P09192 41237214
    1045778 9phw:D (1.99) BS07 PHO N/A GO:0005506 ... P09192 41237214
    1045779 9phw:D (1.99) BS08 CLA N/A GO:0005506 ... P09192 41237214
    1045780 9phw:D (1.99) BS09 CLA N/A GO:0005506 ... P09192 41237214
    1045781 9phw:E (1.99) BS01 HEM N/A GO:0005506 ... P09190 41237214
    1045782 9phw:F (1.99) BS01 HEM N/A GO:0005506 ... P09191 41237214
    1045783 9phw:H (1.99) BS01 CLA N/A GO:0009523 ... P14835 41237214
    1045784 9phw:H (1.99) BS02 CLA N/A GO:0009523 ... P14835 41237214
    1045785 9phw:H (1.99) BS03 CLA N/A GO:0009523 ... P14835 41237214
    1045786 9phw:H (1.99) BS04 RRX N/A GO:0009523 ... P14835 41237214
    1045787 9phw:I (1.99) BS01 CLA N/A GO:0005737 ... Q54697 41237214
    1045788 9phw:K (1.99) BS01 CLA N/A GO:0005737 ... P15819 41237214
    1045789 9phw:K (1.99) BS02 CLA N/A GO:0005737 ... P15819 41237214
    1045790 9phw:K (1.99) BS03 CLA N/A GO:0005737 ... P15819 41237214
    1045791 9phw:K (1.99) BS04 CA N/A GO:0005737 ... P15819 41237214
    1045792 9phw:U (1.99) BS01 CA N/A GO:0009523 ... Q55332 41237214
    1045793 9phw:V (1.99) BS01 HEM N/A GO:0005506 ... Q55013 41237214
    1045794 9phw:V (1.99) BS02 CA N/A GO:0005506 ... Q55013 41237214
    1045795 9phw:X (1.99) BS01 CLA N/A GO:0009523 ... P72575 41237214
    1045796 9phw:Z (1.99) BS01 CLA N/A GO:0009523 ... P73528 41237214
    1045797 9phw:a (1.99) BS01 OEX N/A GO:0005506 ... P16033 41237214
    1045798 9phw:a (1.99) BS02 FE2 N/A GO:0005506 ... P16033 41237214
    1045799 9phw:a (1.99) BS03 CL N/A GO:0005506 ... P16033 41237214
    1045800 9phw:a (1.99) BS04 CLA N/A GO:0005506 ... P16033 41237214

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).