SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1045801 9phw:a (1.99) BS05 CLA N/A GO:0005506 ... P16033 41237214
    1045802 9phw:a (1.99) BS06 PHO N/A GO:0005506 ... P16033 41237214
    1045803 9phw:a (1.99) BS07 CLA N/A GO:0005506 ... P16033 41237214
    1045804 9phw:a (1.99) BS08 BCT N/A GO:0005506 ... P16033 41237214
    1045805 9phw:a (1.99) BS09 CLA N/A GO:0005506 ... P16033 41237214
    1045806 9phw:a (1.99) BS10 CLA N/A GO:0005506 ... P16033 41237214
    1045807 9phw:a (1.99) BS11 PHO N/A GO:0005506 ... P16033 41237214
    1045808 9phw:b (1.99) BS01 CLA N/A GO:0009521 ... P05429 41237214
    1045809 9phw:b (1.99) BS02 CLA N/A GO:0009521 ... P05429 41237214
    1045810 9phw:b (1.99) BS03 CLA N/A GO:0009521 ... P05429 41237214
    1045811 9phw:b (1.99) BS04 CLA N/A GO:0009521 ... P05429 41237214
    1045812 9phw:b (1.99) BS05 CLA N/A GO:0009521 ... P05429 41237214
    1045813 9phw:b (1.99) BS06 CLA N/A GO:0009521 ... P05429 41237214
    1045814 9phw:b (1.99) BS07 CLA N/A GO:0009521 ... P05429 41237214
    1045815 9phw:b (1.99) BS08 CLA N/A GO:0009521 ... P05429 41237214
    1045816 9phw:b (1.99) BS09 CLA N/A GO:0009521 ... P05429 41237214
    1045817 9phw:b (1.99) BS10 CLA N/A GO:0009521 ... P05429 41237214
    1045818 9phw:b (1.99) BS11 CLA N/A GO:0009521 ... P05429 41237214
    1045819 9phw:b (1.99) BS12 CLA N/A GO:0009521 ... P05429 41237214
    1045820 9phw:b (1.99) BS13 CLA N/A GO:0009521 ... P05429 41237214
    1045821 9phw:b (1.99) BS14 CLA N/A GO:0009521 ... P05429 41237214
    1045822 9phw:b (1.99) BS15 CLA N/A GO:0009521 ... P05429 41237214
    1045823 9phw:b (1.99) BS16 CLA N/A GO:0009521 ... P05429 41237214
    1045824 9phw:c (1.99) BS01 OEX N/A GO:0005737 ... P09193 41237214
    1045825 9phw:c (1.99) BS02 CLA N/A GO:0005737 ... P09193 41237214
    1045826 9phw:c (1.99) BS03 CLA N/A GO:0005737 ... P09193 41237214
    1045827 9phw:c (1.99) BS04 CLA N/A GO:0005737 ... P09193 41237214
    1045828 9phw:c (1.99) BS05 CLA N/A GO:0005737 ... P09193 41237214
    1045829 9phw:c (1.99) BS06 CLA N/A GO:0005737 ... P09193 41237214
    1045830 9phw:c (1.99) BS07 CLA N/A GO:0005737 ... P09193 41237214
    1045831 9phw:c (1.99) BS08 CLA N/A GO:0005737 ... P09193 41237214
    1045832 9phw:c (1.99) BS09 CLA N/A GO:0005737 ... P09193 41237214
    1045833 9phw:c (1.99) BS10 CLA N/A GO:0005737 ... P09193 41237214
    1045834 9phw:c (1.99) BS11 CLA N/A GO:0005737 ... P09193 41237214
    1045835 9phw:c (1.99) BS12 CLA N/A GO:0005737 ... P09193 41237214
    1045836 9phw:c (1.99) BS13 CLA N/A GO:0005737 ... P09193 41237214
    1045837 9phw:c (1.99) BS14 CLA N/A GO:0005737 ... P09193 41237214
    1045838 9phw:d (1.99) BS01 FE2 N/A GO:0005506 ... P09192 41237214
    1045839 9phw:d (1.99) BS02 CLA N/A GO:0005506 ... P09192 41237214
    1045840 9phw:d (1.99) BS03 PHO N/A GO:0005506 ... P09192 41237214
    1045841 9phw:d (1.99) BS04 BCT N/A GO:0005506 ... P09192 41237214
    1045842 9phw:d (1.99) BS05 CLA N/A GO:0005506 ... P09192 41237214
    1045843 9phw:d (1.99) BS06 CLA N/A GO:0005506 ... P09192 41237214
    1045844 9phw:d (1.99) BS07 PHO N/A GO:0005506 ... P09192 41237214
    1045845 9phw:d (1.99) BS08 CLA N/A GO:0005506 ... P09192 41237214
    1045846 9phw:d (1.99) BS09 CLA N/A GO:0005506 ... P09192 41237214
    1045847 9phw:e (1.99) BS01 HEM N/A GO:0005506 ... P09190 41237214
    1045848 9phw:f (1.99) BS01 HEM N/A GO:0005506 ... P09191 41237214
    1045849 9phw:h (1.99) BS01 CLA N/A GO:0009523 ... P14835 41237214
    1045850 9phw:h (1.99) BS02 CLA N/A GO:0009523 ... P14835 41237214
    1045851 9phw:h (1.99) BS03 CLA N/A GO:0009523 ... P14835 41237214
    1045852 9phw:h (1.99) BS04 RRX N/A GO:0009523 ... P14835 41237214
    1045853 9phw:i (1.99) BS01 CLA N/A GO:0005737 ... Q54697 41237214
    1045854 9phw:k (1.99) BS01 CLA N/A GO:0005737 ... P15819 41237214
    1045855 9phw:k (1.99) BS02 CLA N/A GO:0005737 ... P15819 41237214
    1045856 9phw:k (1.99) BS03 CA N/A GO:0005737 ... P15819 41237214
    1045857 9phw:u (1.99) BS01 CA N/A GO:0009523 ... Q55332 41237214
    1045858 9phw:v (1.99) BS01 HEM N/A GO:0005506 ... Q55013 41237214
    1045859 9phw:v (1.99) BS02 CA N/A GO:0005506 ... Q55013 41237214
    1045860 9phw:x (1.99) BS01 CLA N/A GO:0009523 ... P72575 41237214
    1045861 9phw:z (1.99) BS01 CLA N/A GO:0009523 ... P73528 41237214
    1045862 9pi9:C (1.56) BS01 MAN N/A N/A N/A 41314216
    1045863 9pib:A (2.35) BS01 peptide N/A N/A P03452 N/A
    1045864 9pib:B (2.35) BS01 peptide N/A N/A P03452 N/A
    1045865 9pib:C (2.35) BS01 peptide N/A N/A P03452 N/A
    1045866 9pib:D (2.35) BS01 peptide N/A N/A P03452 N/A
    1045867 9pib:E (2.35) BS01 peptide N/A N/A P03452 N/A
    1045868 9pib:F (2.35) BS01 peptide N/A N/A P03452 N/A
    1045869 9pib:G (2.35) BS01 peptide N/A N/A P03452 N/A
    1045870 9pib:H (2.35) BS01 peptide N/A N/A P03452 N/A
    1045871 9pio:B (2.61) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045872 9pio:B (2.61) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045873 9pio:B (2.61) BS03 MG N/A GO:0005524 ... C3TLS7 N/A
    1045874 9pio:C (2.61) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045875 9pio:C (2.61) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045876 9pio:D (2.61) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045877 9pio:D (2.61) BS02 MG N/A GO:0005524 ... C3TLS7 N/A
    1045878 9pio:D (2.61) BS03 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045879 9pio:E (2.61) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045880 9pio:E (2.61) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045881 9pio:E (2.61) BS03 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045882 9pio:F (2.61) BS01 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045883 9pit:L (3.1) BS01 MAN N/A N/A N/A N/A
    1045884 9pit:Q (3.1) BS01 MAN N/A N/A N/A N/A
    1045885 9pit:R (3.1) BS01 MAN N/A N/A N/A N/A
    1045886 9pix:A (2.35) BS01 peptide N/A GO:0000139 ... Q8WLS4 40990156
    1045887 9pix:L (2.35) BS01 peptide N/A N/A N/A 40990156
    1045888 9piz:A (1.94) BS01 GDP N/A N/A P01116 41769711
    1045889 9piz:A (1.94) BS02 A1CII N/A N/A P01116 41769711
    1045890 9pj2:A (2.1) BS01 ILE N/A N/A C1IC29 41190445
    1045891 9pj2:A (2.1) BS02 FE2 N/A N/A C1IC29 41190445
    1045892 9pj2:B (2.1) BS01 FE2 N/A N/A C1IC29 41190445
    1045893 9pj2:B (2.1) BS02 ILE N/A N/A C1IC29 41190445
    1045894 9pj2:B (2.1) BS03 FE2 N/A N/A C1IC29 41190445
    1045895 9pj2:B (2.1) BS04 OXY N/A N/A C1IC29 41190445
    1045896 9pj2:C (2.1) BS01 FE2 N/A N/A C1IC29 41190445
    1045897 9pj2:C (2.1) BS02 ILE N/A N/A C1IC29 41190445
    1045898 9pj2:C (2.1) BS03 FE2 N/A N/A C1IC29 41190445
    1045899 9pj2:C (2.1) BS04 OXY N/A N/A C1IC29 41190445
    1045900 9pj2:D (2.1) BS01 ILE N/A N/A C1IC29 41190445
    1045901 9pj2:D (2.1) BS02 FE2 N/A N/A C1IC29 41190445
    1045902 9pj2:E (2.1) BS01 ILE N/A N/A C1IC29 41190445
    1045903 9pj2:E (2.1) BS02 FE2 N/A N/A C1IC29 41190445
    1045904 9pj2:F (2.1) BS01 ILE N/A N/A C1IC29 41190445
    1045905 9pj2:F (2.1) BS02 FE2 N/A N/A C1IC29 41190445
    1045906 9pj2:F (2.1) BS03 FE2 N/A N/A C1IC29 41190445
    1045907 9pj2:F (2.1) BS04 OXY N/A N/A C1IC29 41190445
    1045908 9pj3:A (2.1) BS01 MN N/A N/A C1IC29 41190445
    1045909 9pj3:A (2.1) BS02 A1CIL N/A N/A C1IC29 41190445
    1045910 9pj3:B (2.1) BS01 A1CIL N/A N/A C1IC29 41190445
    1045911 9pj3:B (2.1) BS02 MN N/A N/A C1IC29 41190445
    1045912 9pj3:C (2.1) BS01 MN N/A N/A C1IC29 41190445
    1045913 9pj3:C (2.1) BS02 A1CIL N/A N/A C1IC29 41190445
    1045914 9pj3:D (2.1) BS01 MN N/A N/A C1IC29 41190445
    1045915 9pj3:D (2.1) BS02 A1CIL N/A N/A C1IC29 41190445
    1045916 9pj3:E (2.1) BS01 MN N/A N/A C1IC29 41190445
    1045917 9pj3:E (2.1) BS02 A1CIL N/A N/A C1IC29 41190445
    1045918 9pj3:F (2.1) BS01 MN N/A N/A C1IC29 41190445
    1045919 9pj3:F (2.1) BS02 A1CIL N/A N/A C1IC29 41190445
    1045920 9pjd:A (2.67) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045921 9pjd:A (2.67) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045922 9pjd:B (2.67) BS01 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045923 9pjd:B (2.67) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045924 9pjd:B (2.67) BS03 MG N/A GO:0005524 ... C3TLS7 N/A
    1045925 9pjd:C (2.67) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045926 9pjd:C (2.67) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045927 9pjd:C (2.67) BS03 MG N/A GO:0005524 ... C3TLS7 N/A
    1045928 9pjd:D (2.67) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045929 9pjd:D (2.67) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045930 9pjd:D (2.67) BS03 MG N/A GO:0005524 ... C3TLS7 N/A
    1045931 9pjd:E (2.67) BS01 peptide N/A GO:0005524 ... C3TLS7 N/A
    1045932 9pjd:E (2.67) BS02 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045933 9pjd:E (2.67) BS03 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045934 9pjd:E (2.67) BS04 MG N/A GO:0005524 ... C3TLS7 N/A
    1045935 9pjd:F (2.67) BS01 AGS N/A GO:0005524 ... C3TLS7 N/A
    1045936 9pjd:F (2.67) BS02 MG N/A GO:0005524 ... C3TLS7 N/A
    1045937 9pjf:A (1.47) BS01 peptide N/A N/A K4L8Z7 41412823
    1045938 9pjf:B (1.47) BS01 peptide N/A N/A K4L8Z7 41412823
    1045939 9pjg:A (1.74) BS01 peptide N/A N/A P0DTD1 41412823
    1045940 9pjg:B (1.74) BS01 peptide N/A N/A P0DTD1 41412823
    1045941 9pkc:A (2.5) BS01 peptide N/A GO:0000139 ... Q8WLS4 40990156
    1045942 9pkc:L (2.5) BS01 peptide N/A N/A N/A 40990156
    1045943 9pkf:A (2.6) BS01 peptide N/A GO:0000139 ... Q8WLS4 40990156
    1045944 9pkf:L (2.6) BS01 peptide N/A N/A N/A 40990156
    1045945 9pkg:CI (3.26) BS01 rna N/A N/A P20290 41315256
    1045946 9pkg:LA (3.26) BS01 rna N/A GO:0002181 ... P62917 41315256
    1045947 9pkg:LA (3.26) BS02 MG N/A GO:0002181 ... P62917 41315256
    1045948 9pkg:LB (3.26) BS01 rna N/A GO:0002181 ... P39023 41315256
    1045949 9pkg:LC (3.26) BS01 rna N/A N/A P36578 41315256
    1045950 9pkg:LC (3.26) BS02 rna N/A N/A P36578 41315256
    1045951 9pkg:LD (3.26) BS01 rna N/A GO:0000027 ... P46777 41315256
    1045952 9pkg:LD (3.26) BS02 rna N/A GO:0000027 ... P46777 41315256
    1045953 9pkg:LE (3.26) BS01 rna N/A N/A Q02878 41315256
    1045954 9pkg:LF (3.26) BS01 rna N/A GO:0000463 ... P18124 41315256
    1045955 9pkg:LF (3.26) BS02 rna N/A GO:0000463 ... P18124 41315256
    1045956 9pkg:LG (3.26) BS01 rna N/A GO:0000470 ... P62424 41315256
    1045957 9pkg:LG (3.26) BS02 rna N/A GO:0000470 ... P62424 41315256
    1045958 9pkg:LH (3.26) BS01 rna N/A GO:0002181 ... P32969 41315256
    1045959 9pkg:LI (3.26) BS01 rna N/A GO:0000027 ... Q96L21 41315256
    1045960 9pkg:LI (3.26) BS02 rna N/A GO:0000027 ... Q96L21 41315256
    1045961 9pkg:LI (3.26) BS03 rna N/A GO:0000027 ... Q96L21 41315256
    1045962 9pkg:LJ (3.26) BS01 rna N/A GO:0000027 ... P62913 41315256
    1045963 9pkg:LJ (3.26) BS02 rna N/A GO:0000027 ... P62913 41315256
    1045964 9pkg:LJ (3.26) BS03 rna N/A GO:0000027 ... P62913 41315256
    1045965 9pkg:LL (3.26) BS01 rna N/A GO:0002181 ... P26373 41315256
    1045966 9pkg:LL (3.26) BS02 rna N/A GO:0002181 ... P26373 41315256
    1045967 9pkg:LM (3.26) BS01 rna N/A N/A P50914 41315256
    1045968 9pkg:LN (3.26) BS01 rna N/A GO:0002181 ... P61313 41315256
    1045969 9pkg:LN (3.26) BS02 rna N/A GO:0002181 ... P61313 41315256
    1045970 9pkg:LN (3.26) BS03 SPD N/A GO:0002181 ... P61313 41315256
    1045971 9pkg:LO (3.26) BS01 rna N/A GO:0002181 ... P40429 41315256
    1045972 9pkg:LP (3.26) BS01 rna N/A N/A P18621 41315256
    1045973 9pkg:LP (3.26) BS02 rna N/A N/A P18621 41315256
    1045974 9pkg:LQ (3.26) BS01 rna N/A GO:0002181 ... Q07020 41315256
    1045975 9pkg:LR (3.26) BS01 rna N/A GO:0002181 ... P84098 41315256
    1045976 9pkg:LR (3.26) BS02 rna N/A GO:0002181 ... P84098 41315256
    1045977 9pkg:LS (3.26) BS01 rna N/A GO:0002181 ... Q02543 41315256
    1045978 9pkg:LS (3.26) BS02 rna N/A GO:0002181 ... Q02543 41315256
    1045979 9pkg:LT (3.26) BS01 rna N/A GO:0001650 ... P46778 41315256
    1045980 9pkg:LT (3.26) BS02 rna N/A GO:0001650 ... P46778 41315256
    1045981 9pkg:LU (3.26) BS01 rna N/A N/A Q7Z4W8 41315256
    1045982 9pkg:LV (3.26) BS01 rna N/A GO:0000122 ... P62829 41315256
    1045983 9pkg:LW (3.26) BS01 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1045984 9pkg:LW (3.26) BS02 rna N/A GO:0003735 ... A0A994J4A5 41315256
    1045985 9pkg:LX (3.26) BS01 rna N/A N/A P62750 41315256
    1045986 9pkg:LX (3.26) BS02 rna N/A N/A P62750 41315256
    1045987 9pkg:LY (3.26) BS01 rna N/A GO:0002181 ... P61254 41315256
    1045988 9pkg:LY (3.26) BS02 rna N/A GO:0002181 ... P61254 41315256
    1045989 9pkg:LZ (3.26) BS01 rna N/A GO:0002181 ... P61353 41315256
    1045990 9pkg:La (3.26) BS01 rna N/A GO:0002181 ... P46776 41315256
    1045991 9pkg:Lb (3.26) BS01 rna N/A N/A P47914 41315256
    1045992 9pkg:Lc (3.26) BS01 rna N/A N/A P62888 41315256
    1045993 9pkg:Ld (3.26) BS01 rna N/A N/A P62899 41315256
    1045994 9pkg:Le (3.26) BS01 rna N/A GO:0002181 ... P62910 41315256
    1045995 9pkg:Le (3.26) BS02 MG N/A GO:0002181 ... P62910 41315256
    1045996 9pkg:Lf (3.26) BS01 rna N/A GO:0002181 ... P18077 41315256
    1045997 9pkg:Lg (3.26) BS01 rna N/A GO:0002181 ... P49207 41315256
    1045998 9pkg:Lh (3.26) BS01 rna N/A GO:0000463 ... P42766 41315256
    1045999 9pkg:Lh (3.26) BS02 rna N/A GO:0000463 ... P42766 41315256
    1046000 9pkg:Li (3.26) BS01 rna N/A GO:0002181 ... Q9Y3U8 41315256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).