SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1046201 9pn2:A (2.39) BS01 MN N/A N/A C3W5S0 41512630
    1046202 9pn2:A (2.39) BS02 MN N/A N/A C3W5S0 41512630
    1046203 9pn2:A (2.39) BS03 A1CI4 N/A N/A C3W5S0 41512630
    1046204 9pn3:A (2.36) BS01 MN N/A N/A C3W5S0 41512630
    1046205 9pn3:A (2.36) BS02 MN N/A N/A C3W5S0 41512630
    1046206 9pn3:A (2.36) BS03 A1CI5 N/A N/A C3W5S0 41512630
    1046207 9pnd:A (3.19) BS01 GTP N/A GO:0000226 ... P68369 41224993
    1046208 9pnd:B (3.19) BS01 GDP N/A GO:0000226 ... Q9ERD7 41224993
    1046209 9pnd:B (3.19) BS02 EPB N/A GO:0000226 ... Q9ERD7 41224993
    1046210 9pnd:C (3.19) BS01 GTP N/A GO:0000226 ... P68369 41224993
    1046211 9pnd:D (3.19) BS01 GDP N/A GO:0000226 ... Q9ERD7 41224993
    1046212 9pnd:D (3.19) BS02 EPB N/A GO:0000226 ... Q9ERD7 41224993
    1046213 9png:A (1.97) BS01 CA N/A GO:0005506 ... P0ABE7 41072111
    1046214 9png:B (1.97) BS01 CA N/A GO:0005506 ... P0ABE7 41072111
    1046215 9pnj:A (2.2) BS01 MG N/A N/A A0A1B1Y5Q3 41114657
    1046216 9pnj:B (2.2) BS01 MG N/A N/A A0A1B1Y5Q3 41114657
    1046217 9pnk:A (2.19) BS01 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046218 9pnk:A (2.19) BS02 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046219 9pnk:A (2.19) BS03 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046220 9pnk:A (2.19) BS04 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046221 9pnk:A (2.19) BS05 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046222 9pnk:A (2.19) BS06 MG N/A N/A A0A1B1Y5Q3 41114657
    1046223 9pnk:B (2.19) BS01 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046224 9pnk:B (2.19) BS02 FUL N/A N/A A0A1B1Y5Q3 41114657
    1046225 9pnk:B (2.19) BS03 MG N/A N/A A0A1B1Y5Q3 41114657
    1046226 9pnl:A (2.21) BS01 MN N/A N/A C3W5S0 41512630
    1046227 9pnl:A (2.21) BS02 MN N/A N/A C3W5S0 41512630
    1046228 9pnl:A (2.21) BS03 A1CI5 N/A N/A C3W5S0 41512630
    1046229 9pnm:A (2.14) BS01 MN N/A N/A C3W5S0 41512630
    1046230 9pnm:A (2.14) BS02 MN N/A N/A C3W5S0 41512630
    1046231 9pnm:A (2.14) BS03 A1CI4 N/A N/A C3W5S0 41512630
    1046232 9pns:A (3.4) BS01 A1CIZ N/A N/A P31645 41712624
    1046233 9pnu:H (3.01) BS01 MAN N/A N/A N/A 41615799
    1046234 9pnv:A (2.8) BS01 dna N/A GO:0000166 ... Q859P9 41282253
    1046235 9pnw:A (2.9) BS01 dna N/A GO:0000166 ... Q859P9 41282253
    1046236 9po6:A (2.17) BS01 MN N/A N/A C3W5S0 41512630
    1046237 9po6:A (2.17) BS02 MN N/A N/A C3W5S0 41512630
    1046238 9po6:A (2.17) BS03 A1CI5 N/A N/A C3W5S0 41512630
    1046239 9ppo:A (1.62) BS01 CA N/A GO:0005506 ... P0ABE7 41072111
    1046240 9ppo:B (1.62) BS01 CA N/A GO:0005506 ... P0ABE7 41072111
    1046241 9ppq:R (3.34) BS01 A1CIX N/A N/A P35372 41712624
    1046242 9ppw:A (3.32) BS01 EJ4 N/A N/A P41143 N/A
    1046243 9ppx:A (3.04) BS01 A1CLJ N/A N/A P41143 N/A
    1046244 9ppy:A (3.1) BS01 peptide N/A N/A P41143 N/A
    1046245 9ppz:A (3.19) BS01 A1CLI N/A N/A P41143 N/A
    1046246 9pq0:A (3.12) BS01 A1LXY N/A N/A P41143 N/A
    1046247 9pq3:C (3.94) BS01 MAN N/A N/A A0A0K1H7M8 41615799
    1046248 9pq3:G (3.94) BS01 MAN N/A N/A A0A0K1H7M8 41615799
    1046249 9pq3:I (3.94) BS01 MAN N/A N/A A0A0K1H7M8 41615799
    1046250 9pq5:A (1.28) BS01 GLC N/A GO:0008643 ... Q07820 40825222
    1046251 9pq5:A (1.28) BS02 GLC N/A GO:0008643 ... Q07820 40825222
    1046252 9pq5:A (1.28) BS03 A1CMI N/A GO:0008643 ... Q07820 40825222
    1046253 9pq6:A (1.53) BS01 GLC N/A GO:0008643 ... Q07820 40825222
    1046254 9pq6:A (1.53) BS02 GLC N/A GO:0008643 ... Q07820 40825222
    1046255 9pq6:A (1.53) BS03 A1CMH N/A GO:0008643 ... Q07820 40825222
    1046256 9pq7:A (1.24) BS01 GLC N/A GO:0008643 ... Q07820 40825222
    1046257 9pq7:A (1.24) BS02 GLC N/A GO:0008643 ... Q07820 40825222
    1046258 9pq7:A (1.24) BS03 A1CMG N/A GO:0008643 ... Q07820 40825222
    1046259 9pq9:A (2.93) BS01 A1CI7 N/A N/A Q9UK73 41229306
    1046260 9pq9:B (2.93) BS01 A1CI7 N/A N/A Q9UK73 41229306
    1046261 9pqa:A (2.9) BS01 A1CI8 N/A N/A Q9UK73 41229306
    1046262 9pqa:B (2.9) BS01 A1CI8 N/A N/A Q9UK73 41229306
    1046263 9pqd:R (3.29) BS01 A1CIZ N/A GO:0001819 ... P08913 41712624
    1046264 9pqe:A (3.1) BS01 A1CI9 N/A N/A Q9UK73 41229306
    1046265 9pqe:B (3.1) BS01 A1CI9 N/A N/A Q9UK73 41229306
    1046266 9pqf:A (1.8) BS01 MG N/A N/A N/A 41779823
    1046267 9pqg:A (2.27) BS01 YDL N/A N/A D3KDL2 41305527
    1046268 9pqg:B (2.27) BS01 YDL N/A N/A D3KDL2 41305527
    1046269 9pqg:C (2.27) BS01 YDL N/A N/A D3KDL2 41305527
    1046270 9pqg:D (2.27) BS01 YDL N/A N/A D3KDL2 41305527
    1046271 9pqh:A (-1.00) BS01 peptide N/A GO:0000922 ... P0DP23 41513089
    1046272 9pqh:A (-1.00) BS02 CA N/A GO:0000922 ... P0DP23 41513089
    1046273 9pqh:A (-1.00) BS03 CA N/A GO:0000922 ... P0DP23 41513089
    1046274 9pqh:A (-1.00) BS04 CA N/A GO:0000922 ... P0DP23 41513089
    1046275 9pqh:A (-1.00) BS05 CA N/A GO:0000922 ... P0DP23 41513089
    1046276 9pqi:A (-1.00) BS01 peptide N/A GO:0000922 ... P0DP23 41513089
    1046277 9pqi:A (-1.00) BS02 CA N/A GO:0000922 ... P0DP23 41513089
    1046278 9pqi:A (-1.00) BS03 CA N/A GO:0000922 ... P0DP23 41513089
    1046279 9pqj:A (2.36) BS01 AGS N/A N/A N/A 41779823
    1046280 9pqj:A (2.36) BS02 AGS N/A N/A N/A 41779823
    1046281 9pqj:B (2.36) BS01 AGS N/A N/A N/A 41779823
    1046282 9pqj:B (2.36) BS02 AGS N/A N/A N/A 41779823
    1046283 9pqj:C (2.36) BS01 AGS N/A N/A N/A 41779823
    1046284 9pqj:C (2.36) BS02 AGS N/A N/A N/A 41779823
    1046285 9pqj:D (2.36) BS01 AGS N/A N/A N/A 41779823
    1046286 9pqj:D (2.36) BS02 MG N/A N/A N/A 41779823
    1046287 9pqj:D (2.36) BS03 AGS N/A N/A N/A 41779823
    1046288 9pqj:E (2.36) BS01 AGS N/A N/A N/A 41779823
    1046289 9pqj:E (2.36) BS02 AGS N/A N/A N/A 41779823
    1046290 9pqj:F (2.36) BS01 AGS N/A N/A N/A 41779823
    1046291 9pqj:F (2.36) BS02 AGS N/A N/A N/A 41779823
    1046292 9pqj:F (2.36) BS03 MG N/A N/A N/A 41779823
    1046293 9pqm:A (3.18) BS01 AGS N/A N/A N/A 41779823
    1046294 9pqm:A (3.18) BS02 AGS N/A N/A N/A 41779823
    1046295 9pqm:B (3.18) BS01 AGS N/A N/A N/A 41779823
    1046296 9pqm:B (3.18) BS02 AGS N/A N/A N/A 41779823
    1046297 9pqm:B (3.18) BS03 MG N/A N/A N/A 41779823
    1046298 9pqm:C (3.18) BS01 AGS N/A N/A N/A 41779823
    1046299 9pqm:C (3.18) BS02 MG N/A N/A N/A 41779823
    1046300 9pqm:C (3.18) BS03 AGS N/A N/A N/A 41779823
    1046301 9pqm:D (3.18) BS01 AGS N/A N/A N/A 41779823
    1046302 9pqm:D (3.18) BS02 MG N/A N/A N/A 41779823
    1046303 9pqm:D (3.18) BS03 AGS N/A N/A N/A 41779823
    1046304 9pqm:E (3.18) BS01 AGS N/A N/A N/A 41779823
    1046305 9pqm:E (3.18) BS02 AGS N/A N/A N/A 41779823
    1046306 9pqm:E (3.18) BS03 MG N/A N/A N/A 41779823
    1046307 9pqm:F (3.18) BS01 AGS N/A N/A N/A 41779823
    1046308 9pqm:F (3.18) BS02 AGS N/A N/A N/A 41779823
    1046309 9pqm:F (3.18) BS03 MG N/A N/A N/A 41779823
    1046310 9pqo:A (3.1) BS01 AGS N/A N/A N/A 41779823
    1046311 9pqo:B (3.1) BS01 AGS N/A N/A N/A 41779823
    1046312 9pqo:B (3.1) BS02 MG N/A N/A N/A 41779823
    1046313 9pqo:B (3.1) BS03 AGS N/A N/A N/A 41779823
    1046314 9pqo:C (3.1) BS01 AGS N/A N/A N/A 41779823
    1046315 9pqo:C (3.1) BS02 AGS N/A N/A N/A 41779823
    1046316 9pqo:D (3.1) BS01 AGS N/A N/A N/A 41779823
    1046317 9pqo:D (3.1) BS02 AGS N/A N/A N/A 41779823
    1046318 9pqo:D (3.1) BS03 MG N/A N/A N/A 41779823
    1046319 9pqo:E (3.1) BS01 AGS N/A N/A N/A 41779823
    1046320 9pqq:A (3.32) BS01 MG N/A N/A N/A 41779823
    1046321 9pqq:A (3.32) BS02 AGS N/A N/A N/A 41779823
    1046322 9pqq:A (3.32) BS03 AGS N/A N/A N/A 41779823
    1046323 9pqq:B (3.32) BS01 AGS N/A N/A N/A 41779823
    1046324 9pqq:B (3.32) BS02 AGS N/A N/A N/A 41779823
    1046325 9pqq:B (3.32) BS03 MG N/A N/A N/A 41779823
    1046326 9pqq:B (3.32) BS04 MG N/A N/A N/A 41779823
    1046327 9pqq:C (3.32) BS01 AGS N/A N/A N/A 41779823
    1046328 9pqq:C (3.32) BS02 MG N/A N/A N/A 41779823
    1046329 9pqq:C (3.32) BS03 AGS N/A N/A N/A 41779823
    1046330 9pqq:D (3.32) BS01 AGS N/A N/A N/A 41779823
    1046331 9pqq:D (3.32) BS02 AGS N/A N/A N/A 41779823
    1046332 9pqq:D (3.32) BS03 MG N/A N/A N/A 41779823
    1046333 9pqq:D (3.32) BS04 MG N/A N/A N/A 41779823
    1046334 9pqq:E (3.32) BS01 AGS N/A N/A N/A 41779823
    1046335 9pqq:E (3.32) BS02 AGS N/A N/A N/A 41779823
    1046336 9pqq:E (3.32) BS03 MG N/A N/A N/A 41779823
    1046337 9pqq:E (3.32) BS04 MG N/A N/A N/A 41779823
    1046338 9pqq:F (3.32) BS01 AGS N/A N/A N/A 41779823
    1046339 9pqq:F (3.32) BS02 AGS N/A N/A N/A 41779823
    1046340 9pqq:F (3.32) BS03 MG N/A N/A N/A 41779823
    1046341 9pqq:G (3.32) BS01 MG N/A N/A N/A 41779823
    1046342 9pqq:G (3.32) BS02 AGS N/A N/A N/A 41779823
    1046343 9pqq:G (3.32) BS03 AGS N/A N/A N/A 41779823
    1046344 9pqq:H (3.32) BS01 AGS N/A N/A N/A 41779823
    1046345 9pqq:H (3.32) BS02 AGS N/A N/A N/A 41779823
    1046346 9pqq:H (3.32) BS03 MG N/A N/A N/A 41779823
    1046347 9pqq:I (3.32) BS01 AGS N/A N/A N/A 41779823
    1046348 9pqq:I (3.32) BS02 AGS N/A N/A N/A 41779823
    1046349 9pqq:I (3.32) BS03 MG N/A N/A N/A 41779823
    1046350 9pqq:J (3.32) BS01 AGS N/A N/A N/A 41779823
    1046351 9pqq:J (3.32) BS02 AGS N/A N/A N/A 41779823
    1046352 9pqq:J (3.32) BS03 MG N/A N/A N/A 41779823
    1046353 9pqq:K (3.32) BS01 AGS N/A N/A N/A 41779823
    1046354 9pqq:K (3.32) BS02 AGS N/A N/A N/A 41779823
    1046355 9pqq:L (3.32) BS01 AGS N/A N/A N/A 41779823
    1046356 9pqq:L (3.32) BS02 AGS N/A N/A N/A 41779823
    1046357 9pqq:L (3.32) BS03 MG N/A N/A N/A 41779823
    1046358 9pqr:A (2.95) BS01 AGS N/A N/A N/A 41779823
    1046359 9pqr:A (2.95) BS02 MG N/A N/A N/A 41779823
    1046360 9pqr:A (2.95) BS03 AGS N/A N/A N/A 41779823
    1046361 9pqr:B (2.95) BS01 AGS N/A N/A N/A 41779823
    1046362 9pqr:B (2.95) BS02 AGS N/A N/A N/A 41779823
    1046363 9pqr:B (2.95) BS03 MG N/A N/A N/A 41779823
    1046364 9pqr:C (2.95) BS01 AGS N/A N/A N/A 41779823
    1046365 9pqr:C (2.95) BS02 AGS N/A N/A N/A 41779823
    1046366 9pqr:C (2.95) BS03 MG N/A N/A N/A 41779823
    1046367 9pqr:D (2.95) BS01 AGS N/A N/A N/A 41779823
    1046368 9pqr:D (2.95) BS02 AGS N/A N/A N/A 41779823
    1046369 9pqr:D (2.95) BS03 MG N/A N/A N/A 41779823
    1046370 9pqr:E (2.95) BS01 AGS N/A N/A N/A 41779823
    1046371 9pqr:E (2.95) BS02 AGS N/A N/A N/A 41779823
    1046372 9pqr:E (2.95) BS03 MG N/A N/A N/A 41779823
    1046373 9pqr:F (2.95) BS01 AGS N/A N/A N/A 41779823
    1046374 9pqr:F (2.95) BS02 AGS N/A N/A N/A 41779823
    1046375 9pqr:F (2.95) BS03 MG N/A N/A N/A 41779823
    1046376 9pqr:F (2.95) BS04 MG N/A N/A N/A 41779823
    1046377 9pqr:G (2.95) BS01 AGS N/A N/A N/A 41779823
    1046378 9pqr:G (2.95) BS02 MG N/A N/A N/A 41779823
    1046379 9pqr:G (2.95) BS03 AGS N/A N/A N/A 41779823
    1046380 9pqr:H (2.95) BS01 AGS N/A N/A N/A 41779823
    1046381 9pqr:H (2.95) BS02 AGS N/A N/A N/A 41779823
    1046382 9pqr:H (2.95) BS03 MG N/A N/A N/A 41779823
    1046383 9pqr:I (2.95) BS01 AGS N/A N/A N/A 41779823
    1046384 9pqr:I (2.95) BS02 AGS N/A N/A N/A 41779823
    1046385 9pqr:J (2.95) BS01 AGS N/A N/A N/A 41779823
    1046386 9pqr:J (2.95) BS02 AGS N/A N/A N/A 41779823
    1046387 9pqr:K (2.95) BS01 AGS N/A N/A N/A 41779823
    1046388 9pqr:K (2.95) BS02 AGS N/A N/A N/A 41779823
    1046389 9pqr:K (2.95) BS03 MG N/A N/A N/A 41779823
    1046390 9pqr:L (2.95) BS01 AGS N/A N/A N/A 41779823
    1046391 9pqr:L (2.95) BS02 AGS N/A N/A N/A 41779823
    1046392 9pqs:A (2.06) BS01 A1ANO N/A N/A N/A 41639433
    1046393 9pqt:A (3.2) BS01 ADP N/A N/A N/A 41779823
    1046394 9pqt:A (3.2) BS02 ADP N/A N/A N/A 41779823
    1046395 9pqt:B (3.2) BS01 ADP N/A N/A N/A 41779823
    1046396 9pqt:B (3.2) BS02 ADP N/A N/A N/A 41779823
    1046397 9pqt:C (3.2) BS01 ADP N/A N/A N/A 41779823
    1046398 9pqt:D (3.2) BS01 ADP N/A N/A N/A 41779823
    1046399 9pqt:D (3.2) BS02 ADP N/A N/A N/A 41779823
    1046400 9pqt:E (3.2) BS01 ADP N/A N/A N/A 41779823

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).