SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1046601 9prd:AZ (3.31) BS01 rna N/A N/A N/A 41663403
    1046602 9prd:D (3.31) BS01 rna N/A N/A N/A 41663403
    1046603 9prd:E (3.31) BS01 rna N/A N/A N/A 41663403
    1046604 9prd:F (3.31) BS01 rna N/A N/A N/A 41663403
    1046605 9prd:H (3.31) BS01 rna N/A N/A N/A 41663403
    1046606 9prd:I (3.31) BS01 rna N/A N/A N/A 41663403
    1046607 9prd:I (3.31) BS02 FES N/A N/A N/A 41663403
    1046608 9prd:J (3.31) BS01 rna N/A N/A N/A 41663403
    1046609 9prd:K (3.31) BS01 rna N/A N/A N/A 41663403
    1046610 9prd:L (3.31) BS01 rna N/A N/A N/A 41663403
    1046611 9prd:L (3.31) BS02 rna N/A N/A N/A 41663403
    1046612 9prd:M (3.31) BS01 rna N/A N/A N/A 41663403
    1046613 9prd:N (3.31) BS01 rna N/A N/A N/A 41663403
    1046614 9prd:O (3.31) BS01 rna N/A N/A N/A 41663403
    1046615 9prd:OX (3.31) BS01 rna N/A N/A N/A 41663403
    1046616 9prd:P (3.31) BS01 rna N/A N/A N/A 41663403
    1046617 9prd:P (3.31) BS02 rna N/A N/A N/A 41663403
    1046618 9prd:Q (3.31) BS01 rna N/A N/A N/A 41663403
    1046619 9prd:R (3.31) BS01 rna N/A N/A N/A 41663403
    1046620 9prd:S (3.31) BS01 rna N/A N/A N/A 41663403
    1046621 9prd:T (3.31) BS01 rna N/A N/A N/A 41663403
    1046622 9prd:U (3.31) BS01 rna N/A N/A N/A 41663403
    1046623 9prd:V (3.31) BS01 rna N/A N/A N/A 41663403
    1046624 9prd:W (3.31) BS01 rna N/A N/A N/A 41663403
    1046625 9prd:X (3.31) BS01 rna N/A N/A N/A 41663403
    1046626 9prd:Y (3.31) BS01 rna N/A N/A N/A 41663403
    1046627 9prd:Z (3.31) BS01 rna N/A N/A N/A 41663403
    1046628 9prd:a (3.31) BS01 rna N/A N/A N/A 41663403
    1046629 9prd:b (3.31) BS01 rna N/A N/A N/A 41663403
    1046630 9prd:c (3.31) BS01 rna N/A N/A N/A 41663403
    1046631 9prd:d (3.31) BS01 rna N/A N/A N/A 41663403
    1046632 9prd:e (3.31) BS01 rna N/A N/A N/A 41663403
    1046633 9prd:e (3.31) BS02 VAL N/A N/A N/A 41663403
    1046634 9prd:f (3.31) BS01 rna N/A N/A N/A 41663403
    1046635 9prd:f (3.31) BS02 rna N/A N/A N/A 41663403
    1046636 9prd:f (3.31) BS03 rna N/A N/A N/A 41663403
    1046637 9prd:g (3.31) BS01 rna N/A N/A N/A 41663403
    1046638 9prd:i (3.31) BS01 rna N/A N/A N/A 41663403
    1046639 9prd:j (3.31) BS01 rna N/A N/A N/A 41663403
    1046640 9prd:k (3.31) BS01 rna N/A N/A N/A 41663403
    1046641 9prd:l (3.31) BS01 rna N/A N/A N/A 41663403
    1046642 9prd:m (3.31) BS01 rna N/A N/A N/A 41663403
    1046643 9prd:n (3.31) BS01 rna N/A N/A N/A 41663403
    1046644 9prd:o (3.31) BS01 rna N/A N/A N/A 41663403
    1046645 9prd:q (3.31) BS01 rna N/A N/A N/A 41663403
    1046646 9prd:q (3.31) BS02 rna N/A N/A N/A 41663403
    1046647 9prd:r (3.31) BS01 rna N/A N/A N/A 41663403
    1046648 9prd:r (3.31) BS02 FES N/A N/A N/A 41663403
    1046649 9prd:s (3.31) BS01 rna N/A N/A N/A 41663403
    1046650 9pre:A (1.68) BS01 A1CJH N/A N/A P0AEG4 41789772
    1046651 9pre:A (1.68) BS02 A1CJH N/A N/A P0AEG4 41789772
    1046652 9prf:A (1.61) BS01 A1CQW N/A N/A P0AEG4 41789772
    1046653 9prf:A (1.61) BS02 A1CJJ N/A N/A P0AEG4 41789772
    1046654 9prf:B (1.61) BS01 A1CJJ N/A N/A P0AEG4 41789772
    1046655 9prf:B (1.61) BS02 A1CQW N/A N/A P0AEG4 41789772
    1046656 9prg:A (1.65) BS01 LYS N/A N/A P0AEG4 41789772
    1046657 9prg:A (1.65) BS02 A1CJK N/A N/A P0AEG4 41789772
    1046658 9prg:B (1.65) BS01 LYS N/A N/A P0AEG4 41789772
    1046659 9prg:B (1.65) BS02 A1CJK N/A N/A P0AEG4 41789772
    1046660 9prg:B (1.65) BS03 A1CJK N/A N/A P0AEG4 41789772
    1046661 9prh:A (2.08) BS01 A1CJL N/A N/A P0AEG4 41789772
    1046662 9pri:A (1.27) BS01 A1CJM N/A N/A P0AEG4 41789772
    1046663 9prj:A (1.81) BS01 A1CJN N/A N/A P0AEG4 41789772
    1046664 9prk:A (1.76) BS01 A1CJO N/A N/A P0AEG4 41789772
    1046665 9prl:A (1.91) BS01 A1CJP N/A N/A P0AEG4 41789772
    1046666 9prl:A (1.91) BS02 A1CJP N/A N/A P0AEG4 41789772
    1046667 9prl:B (1.91) BS01 A1CJP N/A N/A P0AEG4 41789772
    1046668 9prm:A (2.1) BS01 A1CJQ N/A N/A P0AEG4 41789772
    1046669 9prm:A (2.1) BS02 A1CJQ N/A N/A P0AEG4 41789772
    1046670 9prm:B (2.1) BS01 A1CJQ N/A N/A P0AEG4 41789772
    1046671 9prq:0 (3.34) BS01 rna N/A N/A N/A 41663403
    1046672 9prq:0 (3.34) BS02 ZN N/A N/A N/A 41663403
    1046673 9prq:1 (3.34) BS01 rna N/A N/A N/A 41663403
    1046674 9prq:2 (3.34) BS01 rna N/A N/A N/A 41663403
    1046675 9prq:3 (3.34) BS01 rna N/A N/A N/A 41663403
    1046676 9prq:4 (3.34) BS01 rna N/A N/A N/A 41663403
    1046677 9prq:4 (3.34) BS02 ZN N/A N/A N/A 41663403
    1046678 9prq:5 (3.34) BS01 rna N/A N/A N/A 41663403
    1046679 9prq:6 (3.34) BS01 rna N/A N/A N/A 41663403
    1046680 9prq:6 (3.34) BS02 rna N/A N/A N/A 41663403
    1046681 9prq:8 (3.34) BS01 rna N/A N/A N/A 41663403
    1046682 9prq:8 (3.34) BS02 rna N/A N/A N/A 41663403
    1046683 9prq:8 (3.34) BS03 rna N/A N/A N/A 41663403
    1046684 9prq:9 (3.34) BS01 rna N/A N/A N/A 41663403
    1046685 9prq:A0 (3.34) BS01 rna N/A N/A N/A 41663403
    1046686 9prq:A1 (3.34) BS01 rna N/A N/A N/A 41663403
    1046687 9prq:A2 (3.34) BS01 rna N/A N/A N/A 41663403
    1046688 9prq:A3 (3.34) BS01 rna N/A N/A N/A 41663403
    1046689 9prq:A4 (3.34) BS01 rna N/A N/A N/A 41663403
    1046690 9prq:AB (3.34) BS01 rna N/A N/A N/A 41663403
    1046691 9prq:AB (3.34) BS02 MG N/A N/A N/A 41663403
    1046692 9prq:AC (3.34) BS01 rna N/A N/A N/A 41663403
    1046693 9prq:AD (3.34) BS01 rna N/A N/A N/A 41663403
    1046694 9prq:AD (3.34) BS02 rna N/A N/A N/A 41663403
    1046695 9prq:AE (3.34) BS01 rna N/A N/A N/A 41663403
    1046696 9prq:AE (3.34) BS02 FES N/A N/A N/A 41663403
    1046697 9prq:AF (3.34) BS01 rna N/A N/A N/A 41663403
    1046698 9prq:AF (3.34) BS02 rna N/A N/A N/A 41663403
    1046699 9prq:AG (3.34) BS01 rna N/A N/A N/A 41663403
    1046700 9prq:AG (3.34) BS02 rna N/A N/A N/A 41663403
    1046701 9prq:AG (3.34) BS03 rna N/A N/A N/A 41663403
    1046702 9prq:AH (3.34) BS01 rna N/A N/A N/A 41663403
    1046703 9prq:AI (3.34) BS01 rna N/A N/A N/A 41663403
    1046704 9prq:AJ (3.34) BS01 rna N/A N/A N/A 41663403
    1046705 9prq:AJ (3.34) BS02 rna N/A N/A N/A 41663403
    1046706 9prq:AK (3.34) BS01 rna N/A N/A N/A 41663403
    1046707 9prq:AL (3.34) BS01 rna N/A N/A N/A 41663403
    1046708 9prq:AL (3.34) BS02 NAD N/A N/A N/A 41663403
    1046709 9prq:AM (3.34) BS01 rna N/A N/A N/A 41663403
    1046710 9prq:AM (3.34) BS02 FES N/A N/A N/A 41663403
    1046711 9prq:AN (3.34) BS01 rna N/A N/A N/A 41663403
    1046712 9prq:AO (3.34) BS01 rna N/A N/A N/A 41663403
    1046713 9prq:AO (3.34) BS02 ZN N/A N/A N/A 41663403
    1046714 9prq:AP (3.34) BS01 rna N/A N/A N/A 41663403
    1046715 9prq:AP (3.34) BS02 FES N/A N/A N/A 41663403
    1046716 9prq:AQ (3.34) BS01 rna N/A N/A N/A 41663403
    1046717 9prq:AS (3.34) BS01 rna N/A N/A N/A 41663403
    1046718 9prq:AT (3.34) BS01 rna N/A N/A N/A 41663403
    1046719 9prq:AT (3.34) BS02 FES N/A N/A N/A 41663403
    1046720 9prq:AU (3.34) BS01 rna N/A N/A N/A 41663403
    1046721 9prq:AV (3.34) BS01 rna N/A N/A N/A 41663403
    1046722 9prq:AX (3.34) BS01 rna N/A N/A N/A 41663403
    1046723 9prq:AX (3.34) BS02 ATP N/A N/A N/A 41663403
    1046724 9prq:AX (3.34) BS03 GDP N/A N/A N/A 41663403
    1046725 9prq:AZ (3.34) BS01 rna N/A N/A N/A 41663403
    1046726 9prq:Ag (3.34) BS01 rna N/A N/A N/A 41663403
    1046727 9prq:Ag (3.34) BS02 rna N/A N/A N/A 41663403
    1046728 9prq:D (3.34) BS01 rna N/A N/A N/A 41663403
    1046729 9prq:E (3.34) BS01 rna N/A N/A N/A 41663403
    1046730 9prq:F (3.34) BS01 rna N/A N/A N/A 41663403
    1046731 9prq:H (3.34) BS01 rna N/A N/A N/A 41663403
    1046732 9prq:I (3.34) BS01 rna N/A N/A N/A 41663403
    1046733 9prq:I (3.34) BS02 FES N/A N/A N/A 41663403
    1046734 9prq:J (3.34) BS01 rna N/A N/A N/A 41663403
    1046735 9prq:K (3.34) BS01 rna N/A N/A N/A 41663403
    1046736 9prq:L (3.34) BS01 rna N/A N/A N/A 41663403
    1046737 9prq:M (3.34) BS01 rna N/A N/A N/A 41663403
    1046738 9prq:N (3.34) BS01 rna N/A N/A N/A 41663403
    1046739 9prq:O (3.34) BS01 rna N/A N/A N/A 41663403
    1046740 9prq:OX (3.34) BS01 rna N/A N/A N/A 41663403
    1046741 9prq:P (3.34) BS01 rna N/A N/A N/A 41663403
    1046742 9prq:P (3.34) BS02 rna N/A N/A N/A 41663403
    1046743 9prq:Q (3.34) BS01 rna N/A N/A N/A 41663403
    1046744 9prq:R (3.34) BS01 rna N/A N/A N/A 41663403
    1046745 9prq:S (3.34) BS01 rna N/A N/A N/A 41663403
    1046746 9prq:T (3.34) BS01 rna N/A N/A N/A 41663403
    1046747 9prq:U (3.34) BS01 rna N/A N/A N/A 41663403
    1046748 9prq:V (3.34) BS01 rna N/A N/A N/A 41663403
    1046749 9prq:W (3.34) BS01 rna N/A N/A N/A 41663403
    1046750 9prq:X (3.34) BS01 rna N/A N/A N/A 41663403
    1046751 9prq:Y (3.34) BS01 rna N/A N/A N/A 41663403
    1046752 9prq:Z (3.34) BS01 rna N/A N/A N/A 41663403
    1046753 9prq:a (3.34) BS01 rna N/A N/A N/A 41663403
    1046754 9prq:b (3.34) BS01 rna N/A N/A N/A 41663403
    1046755 9prq:c (3.34) BS01 rna N/A N/A N/A 41663403
    1046756 9prq:d (3.34) BS01 rna N/A N/A N/A 41663403
    1046757 9prq:e (3.34) BS01 rna N/A N/A N/A 41663403
    1046758 9prq:e (3.34) BS02 VAL N/A N/A N/A 41663403
    1046759 9prq:f (3.34) BS01 rna N/A N/A N/A 41663403
    1046760 9prq:f (3.34) BS02 rna N/A N/A N/A 41663403
    1046761 9prq:f (3.34) BS03 rna N/A N/A N/A 41663403
    1046762 9prq:g (3.34) BS01 rna N/A N/A N/A 41663403
    1046763 9prq:i (3.34) BS01 rna N/A N/A N/A 41663403
    1046764 9prq:j (3.34) BS01 rna N/A N/A N/A 41663403
    1046765 9prq:k (3.34) BS01 rna N/A N/A N/A 41663403
    1046766 9prq:l (3.34) BS01 rna N/A N/A N/A 41663403
    1046767 9prq:m (3.34) BS01 rna N/A N/A N/A 41663403
    1046768 9prq:n (3.34) BS01 rna N/A N/A N/A 41663403
    1046769 9prq:o (3.34) BS01 rna N/A N/A N/A 41663403
    1046770 9prq:q (3.34) BS01 rna N/A N/A N/A 41663403
    1046771 9prq:q (3.34) BS02 rna N/A N/A N/A 41663403
    1046772 9prq:r (3.34) BS01 rna N/A N/A N/A 41663403
    1046773 9prq:r (3.34) BS02 FES N/A N/A N/A 41663403
    1046774 9prq:s (3.34) BS01 rna N/A N/A N/A 41663403
    1046775 9prr:A (2.06) BS01 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046776 9prr:A (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046777 9prr:A (2.06) BS03 ZN N/A N/A A0ABQ3RYD4 41120677
    1046778 9prr:B (2.06) BS01 ILE N/A N/A A0ABQ3RYD4 41120677
    1046779 9prr:B (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046780 9prr:B (2.06) BS03 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046781 9prr:C (2.06) BS01 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046782 9prr:C (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046783 9prr:D (2.06) BS01 ILE N/A N/A A0ABQ3RYD4 41120677
    1046784 9prr:D (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046785 9prr:D (2.06) BS03 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046786 9prr:E (2.06) BS01 ILE N/A N/A A0ABQ3RYD4 41120677
    1046787 9prr:E (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046788 9prr:E (2.06) BS03 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046789 9prr:F (2.06) BS01 ILE N/A N/A A0ABQ3RYD4 41120677
    1046790 9prr:F (2.06) BS02 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046791 9prr:F (2.06) BS03 FE2 N/A N/A A0ABQ3RYD4 41120677
    1046792 9prr:F (2.06) BS04 ZN N/A N/A A0ABQ3RYD4 41120677
    1046793 9prs:A (3.03) BS01 UKX N/A N/A Q7L0J3 41315229
    1046794 9prs:A (3.03) BS02 A1B1J N/A N/A Q7L0J3 41315229
    1046795 9prw:A (3.66) BS01 SAH N/A N/A Q9Y6K1 N/A
    1046796 9prw:A (3.66) BS02 ZN N/A N/A Q9Y6K1 N/A
    1046797 9prw:A (3.66) BS03 ZN N/A N/A Q9Y6K1 N/A
    1046798 9prw:A (3.66) BS04 ZN N/A N/A Q9Y6K1 N/A
    1046799 9prw:B (3.66) BS01 ZN N/A GO:0000792 ... Q9UJW3 N/A
    1046800 9prw:B (3.66) BS02 ZN N/A GO:0000792 ... Q9UJW3 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).