SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1047401 9pwn:L (1.8) BS01 peptide N/A N/A N/A 40803893
    1047402 9pwo:A (3.36) BS01 CFF N/A GO:0003151 ... P16960 41266329
    1047403 9pwo:A (3.36) BS02 CA N/A GO:0003151 ... P16960 41266329
    1047404 9pwo:A (3.36) BS03 117 N/A GO:0003151 ... P16960 41266329
    1047405 9pwo:A (3.36) BS04 117 N/A GO:0003151 ... P16960 41266329
    1047406 9pwo:A (3.36) BS05 117 N/A GO:0003151 ... P16960 41266329
    1047407 9pwo:A (3.36) BS06 ZN N/A GO:0003151 ... P16960 41266329
    1047408 9pwo:A (3.36) BS07 117 N/A GO:0003151 ... P16960 41266329
    1047409 9pwo:G (3.36) BS01 CFF N/A GO:0003151 ... P16960 41266329
    1047410 9pwo:G (3.36) BS02 CA N/A GO:0003151 ... P16960 41266329
    1047411 9pwo:G (3.36) BS03 117 N/A GO:0003151 ... P16960 41266329
    1047412 9pwo:G (3.36) BS04 117 N/A GO:0003151 ... P16960 41266329
    1047413 9pwo:G (3.36) BS05 117 N/A GO:0003151 ... P16960 41266329
    1047414 9pwo:G (3.36) BS06 ZN N/A GO:0003151 ... P16960 41266329
    1047415 9pwo:G (3.36) BS07 117 N/A GO:0003151 ... P16960 41266329
    1047416 9pwo:M (3.36) BS01 CFF N/A GO:0003151 ... P16960 41266329
    1047417 9pwo:M (3.36) BS02 CA N/A GO:0003151 ... P16960 41266329
    1047418 9pwo:M (3.36) BS03 117 N/A GO:0003151 ... P16960 41266329
    1047419 9pwo:M (3.36) BS04 117 N/A GO:0003151 ... P16960 41266329
    1047420 9pwo:M (3.36) BS05 117 N/A GO:0003151 ... P16960 41266329
    1047421 9pwo:M (3.36) BS06 ZN N/A GO:0003151 ... P16960 41266329
    1047422 9pwo:M (3.36) BS07 117 N/A GO:0003151 ... P16960 41266329
    1047423 9pwo:S (3.36) BS01 117 N/A GO:0003151 ... P16960 41266329
    1047424 9pwo:S (3.36) BS02 CFF N/A GO:0003151 ... P16960 41266329
    1047425 9pwo:S (3.36) BS03 CA N/A GO:0003151 ... P16960 41266329
    1047426 9pwo:S (3.36) BS04 117 N/A GO:0003151 ... P16960 41266329
    1047427 9pwo:S (3.36) BS05 117 N/A GO:0003151 ... P16960 41266329
    1047428 9pwo:S (3.36) BS06 117 N/A GO:0003151 ... P16960 41266329
    1047429 9pwo:S (3.36) BS07 ZN N/A GO:0003151 ... P16960 41266329
    1047430 9px5:A (3.7) BS01 BGC N/A GO:0005515 ... P0AEX9
    Q9NZC2
    40803893
    1047431 9px5:A (3.7) BS02 GLC N/A GO:0005515 ... P0AEX9
    Q9NZC2
    40803893
    1047432 9pxb:A (3.2) BS01 CLR N/A N/A P97260 N/A
    1047433 9pxb:C (3.2) BS01 CLR N/A GO:0005783 ... Q8CFA5 N/A
    1047434 9pxb:C (3.2) BS02 CLR N/A GO:0005783 ... Q8CFA5 N/A
    1047435 9pxb:C (3.2) BS03 CLR N/A GO:0005783 ... Q8CFA5 N/A
    1047436 9pxc:A (2.37) BS01 NAP N/A GO:0004146 ... P0ABQ4 N/A
    1047437 9pxc:A (2.37) BS02 CA N/A GO:0004146 ... P0ABQ4 N/A
    1047438 9pxf:A (2.58) BS01 CU N/A N/A A0A1I5FIF1 41541579
    1047439 9pxf:B (2.58) BS01 CU N/A N/A A0A1I5FIF1 41541579
    1047440 9pxf:C (2.58) BS01 CU N/A N/A A0A1I5FIF1 41541579
    1047441 9pxf:G (2.58) BS01 CU N/A N/A N/A 41541579
    1047442 9pxf:G (2.58) BS02 CU N/A N/A N/A 41541579
    1047443 9pxf:H (2.58) BS01 CU N/A N/A N/A 41541579
    1047444 9pxf:H (2.58) BS02 CU N/A N/A N/A 41541579
    1047445 9pxf:I (2.58) BS01 CU N/A N/A N/A 41541579
    1047446 9pxf:I (2.58) BS02 CU N/A N/A N/A 41541579
    1047447 9pxo:A (3.05) BS01 A1CMX N/A N/A Q9UK73 41229306
    1047448 9pxo:B (3.05) BS01 A1CMX N/A N/A Q9UK73 41229306
    1047449 9pxp:A (3.0) BS01 A1CMY N/A N/A Q9UK73 41229306
    1047450 9pxu:R (3.4) BS01 A1APV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047451 9pxv:R (3.02) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047452 9pxv:R (3.02) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047453 9pxv:R (3.02) BS03 A1APV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047454 9pxw:A (3.8) BS01 VSN N/A GO:0000132 ... P63096 41193810
    1047455 9pxw:R (3.8) BS01 A1APV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047456 9pxx:A (3.1) BS01 VSN N/A GO:0000132 ... P63096 41193810
    1047457 9pxx:R (3.1) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047458 9pxx:R (3.1) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047459 9pxx:R (3.1) BS03 A1APV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047460 9pxy:A (3.0) BS01 VSN N/A GO:0000132 ... P63096 41193810
    1047461 9pxy:R (3.0) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047462 9pxy:R (3.0) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047463 9pxy:R (3.0) BS03 A1APV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047464 9pxz:A (2.47) BS01 A1CMW N/A GO:0000387 ... O14744 41429045
    1047465 9pxz:A (2.47) BS02 MTA N/A GO:0000387 ... O14744 41429045
    1047466 9py0:A (2.36) BS01 A1CMZ N/A GO:0000387 ... O14744 41429045
    1047467 9py0:A (2.36) BS02 MTA N/A GO:0000387 ... O14744 41429045
    1047468 9py1:A (3.04) BS01 MTA N/A GO:0000387 ... O14744 41429045
    1047469 9py1:A (3.04) BS02 A1CM0 N/A GO:0000387 ... O14744 41429045
    1047470 9py2:A (3.16) BS01 VSN N/A GO:0000132 ... P63096 41193810
    1047471 9py2:R (3.16) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047472 9py2:R (3.16) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047473 9py2:R (3.16) BS03 A1CMV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047474 9py3:A (3.2) BS01 VSN N/A GO:0000132 ... P63096 N/A
    1047475 9py3:R (3.2) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    N/A
    1047476 9py3:R (3.2) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    N/A
    1047477 9py3:R (3.2) BS03 A1CMV N/A GO:0001965 ... P0ABE7
    P35372
    N/A
    1047478 9py4:A (2.78) BS01 VSN N/A GO:0000132 ... P63096 41193810
    1047479 9py4:R (2.78) BS01 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047480 9py4:R (2.78) BS02 CLR N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047481 9py4:R (2.78) BS03 A1CMV N/A GO:0001965 ... P0ABE7
    P35372
    41193810
    1047482 9pyl:A (2.07) BS01 ZN N/A N/A N/A 41339547
    1047483 9pyl:A (2.07) BS02 ZN N/A N/A N/A 41339547
    1047484 9pyl:B (2.07) BS01 ZN N/A N/A N/A 41339547
    1047485 9pym:A (2.98) BS01 8X3 N/A GO:0005886 ... Q312S1 41197622
    1047486 9pyr:E (2.6) BS01 peptide N/A GO:0005737 ... P52293 41012706
    1047487 9pyr:E (2.6) BS02 peptide N/A GO:0005737 ... P52293 41012706
    1047488 9pyw:A (3.1) BS01 rna N/A GO:0003723 ... P0DTD1 40909592
    1047489 9pyw:A (3.1) BS02 rna N/A GO:0003723 ... P0DTD1 40909592
    1047490 9pyw:A (3.1) BS03 ZN N/A GO:0003723 ... P0DTD1 40909592
    1047491 9pyw:A (3.1) BS04 ZN N/A GO:0003723 ... P0DTD1 40909592
    1047492 9pyw:B (3.1) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047493 9pyw:B (3.1) BS02 rna N/A GO:0004197 ... P0DTD1 40909592
    1047494 9pyw:D (3.1) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047495 9pyx:A (1.73) BS01 A1CM5 N/A N/A P12497 41448052
    1047496 9pyx:B (1.73) BS01 A1CM5 N/A N/A P12497 41448052
    1047497 9pyz:A (3.1) BS01 rna N/A GO:0003723 ... P0DTD1 40909592
    1047498 9pyz:A (3.1) BS02 rna N/A GO:0003723 ... P0DTD1 40909592
    1047499 9pyz:A (3.1) BS03 MG N/A GO:0003723 ... P0DTD1 40909592
    1047500 9pyz:A (3.1) BS04 ZN N/A GO:0003723 ... P0DTD1 40909592
    1047501 9pyz:A (3.1) BS05 UTP N/A GO:0003723 ... P0DTD1 40909592
    1047502 9pyz:B (3.1) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047503 9pyz:D (3.1) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047504 9pyz:D (3.1) BS02 rna N/A GO:0004197 ... P0DTD1 40909592
    1047505 9pz0:A (3.0) BS01 rna N/A GO:0003723 ... P0DTD1 40909592
    1047506 9pz0:A (3.0) BS02 rna N/A GO:0003723 ... P0DTD1 40909592
    1047507 9pz0:A (3.0) BS03 ZN N/A GO:0003723 ... P0DTD1 40909592
    1047508 9pz0:B (3.0) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047509 9pz0:D (3.0) BS01 rna N/A GO:0004197 ... P0DTD1 40909592
    1047510 9pz1:A (1.8) BS01 A1CM6 N/A N/A P12497 41448052
    1047511 9pz1:B (1.8) BS01 A1CM6 N/A N/A P12497 41448052
    1047512 9pz7:A (2.504) BS01 dna N/A GO:0004519 ... N/A N/A
    1047513 9pz7:A (2.504) BS02 dna N/A GO:0004519 ... N/A N/A
    1047514 9pz7:A (2.504) BS03 CA N/A GO:0004519 ... N/A N/A
    1047515 9pz7:A (2.504) BS04 CA N/A GO:0004519 ... N/A N/A
    1047516 9pzf:A (1.84) BS01 A1CQ2 N/A N/A P01116 41766690
    1047517 9pzf:A (1.84) BS02 GDP N/A N/A P01116 41766690
    1047518 9pzf:B (1.84) BS01 A1CQ2 N/A N/A P01116 41766690
    1047519 9pzf:B (1.84) BS02 GDP N/A N/A P01116 41766690
    1047520 9pzg:B (2.42) BS01 rna N/A GO:0000028 ... P0A7V0 40909654
    1047521 9pzg:C (2.42) BS01 rna N/A GO:0000028 ... P0A7V3 40909654
    1047522 9pzg:D (2.42) BS01 rna N/A GO:0000028 ... P0A7V8 40909654
    1047523 9pzg:E (2.42) BS01 rna N/A GO:0000028 ... P0A7W1 40909654
    1047524 9pzg:F (2.42) BS01 rna N/A GO:0002181 ... P02358 40909654
    1047525 9pzg:G (2.42) BS01 rna N/A GO:0000028 ... P02359 40909654
    1047526 9pzg:H (2.42) BS01 rna N/A GO:0000028 ... P0A7W7 40909654
    1047527 9pzg:I (2.42) BS01 rna N/A GO:0002181 ... P0A7X3 40909654
    1047528 9pzg:J (2.42) BS01 rna N/A GO:0000049 ... P0A7R5 40909654
    1047529 9pzg:K (2.42) BS01 rna N/A GO:0002181 ... P0A7R9 40909654
    1047530 9pzg:K (2.42) BS02 peptide N/A GO:0002181 ... P0A7R9 40909654
    1047531 9pzg:L (2.42) BS01 rna N/A GO:0000049 ... P0A7S3 40909654
    1047532 9pzg:M (2.42) BS01 rna N/A GO:0000049 ... P0A7S9 40909654
    1047533 9pzg:N (2.42) BS01 rna N/A GO:0000028 ... P0AG59 40909654
    1047534 9pzg:O (2.42) BS01 rna N/A GO:0000028 ... P0ADZ4 40909654
    1047535 9pzg:P (2.42) BS01 rna N/A GO:0000028 ... P0A7T3 40909654
    1047536 9pzg:Q (2.42) BS01 rna N/A GO:0000028 ... P0AG63 40909654
    1047537 9pzg:R (2.42) BS01 rna N/A GO:0002181 ... P0A7T7 40909654
    1047538 9pzg:S (2.42) BS01 rna N/A GO:0002181 ... P0A7U3 40909654
    1047539 9pzg:T (2.42) BS01 rna N/A GO:0000028 ... P0A7U7 40909654
    1047540 9pzg:V (2.42) BS01 rna N/A GO:0005515 ... P67087 40909654
    1047541 9pzg:V (2.42) BS02 AN6 N/A GO:0005515 ... P67087 40909654
    1047542 9pzg:W (2.42) BS01 rna N/A GO:0005515 ... P67087 40909654
    1047543 9pzg:W (2.42) BS02 AN6 N/A GO:0005515 ... P67087 40909654
    1047544 9pzg:W (2.42) BS03 MG N/A GO:0005515 ... P67087 40909654
    1047545 9pzh:A (2.356) BS01 dna N/A GO:0004519 ... N/A N/A
    1047546 9pzh:A (2.356) BS02 dna N/A GO:0004519 ... N/A N/A
    1047547 9pzh:A (2.356) BS03 CA N/A GO:0004519 ... N/A N/A
    1047548 9pzh:A (2.356) BS04 CA N/A GO:0004519 ... N/A N/A
    1047549 9pzj:A (2.9) BS01 FUM N/A GO:0003824 ... O68395 41077954
    1047550 9pzj:B (2.9) BS01 SF4 N/A N/A O68396 41077954
    1047551 9pzj:C (2.9) BS01 SF4 N/A N/A O68394 41077954
    1047552 9pzj:D (2.9) BS01 FUM N/A GO:0003824 ... O68395 41077954
    1047553 9pzj:E (2.9) BS01 SF4 N/A N/A O68396 41077954
    1047554 9pzj:F (2.9) BS01 SF4 N/A N/A O68394 41077954
    1047555 9pzl:A (3.0) BS01 ANP N/A GO:0005524 ... P22983 18052212
    1047556 9pzl:B (3.0) BS01 ANP N/A GO:0005524 ... P22983 18052212
    1047557 9pzl:C (3.0) BS01 ANP N/A GO:0005524 ... P22983 18052212
    1047558 9pzl:D (3.0) BS01 ANP N/A GO:0005524 ... P22983 18052212
    1047559 9pzw:A (3.43) BS01 GLY N/A N/A P35439 41533802
    1047560 9pzw:B (3.43) BS01 GLU N/A N/A Q00959 41533802
    1047561 9pzw:C (3.43) BS01 GLY N/A N/A P35439 41533802
    1047562 9pzw:D (3.43) BS01 GLU N/A N/A Q00959 41533802
    1047563 9pzy:A (2.17) BS01 GDP N/A N/A P01116 41766690
    1047564 9pzy:A (2.17) BS02 A1AWR N/A N/A P01116 41766690
    1047565 9pzy:B (2.17) BS01 GDP N/A N/A P01116 41766690
    1047566 9pzy:B (2.17) BS02 A1AWR N/A N/A P01116 41766690
    1047567 9q03:A (3.15) BS01 A1CM7 N/A N/A P41182 41055242
    1047568 9q03:B (3.15) BS01 A1CM7 N/A N/A P41182 41055242
    1047569 9q03:C (3.15) BS01 ZN N/A GO:0005515 ... Q96SW2 41055242
    1047570 9q03:C (3.15) BS02 A1CM7 N/A GO:0005515 ... Q96SW2 41055242
    1047571 9q05:A (3.09) BS01 HEM N/A N/A N/A 41719409
    1047572 9q05:A (3.09) BS02 HEM N/A N/A N/A 41719409
    1047573 9q05:A (3.09) BS03 FAD N/A N/A N/A 41719409
    1047574 9q05:A (3.09) BS04 FMN N/A N/A N/A 41719409
    1047575 9q05:A (3.09) BS05 NAP N/A N/A N/A 41719409
    1047576 9q06:A (3.9) BS01 HEM N/A N/A N/A 41719409
    1047577 9q06:A (3.9) BS02 HEM N/A N/A N/A 41719409
    1047578 9q06:A (3.9) BS03 FAD N/A N/A N/A 41719409
    1047579 9q06:A (3.9) BS04 FMN N/A N/A N/A 41719409
    1047580 9q06:B (3.9) BS01 HEM N/A N/A N/A 41719409
    1047581 9q06:B (3.9) BS02 HEM N/A N/A N/A 41719409
    1047582 9q06:B (3.9) BS03 FAD N/A N/A N/A 41719409
    1047583 9q06:B (3.9) BS04 FMN N/A N/A N/A 41719409
    1047584 9q0d:A (2.38) BS01 NAD N/A GO:0004491 ... B4E705 N/A
    1047585 9q0d:B (2.38) BS01 NAD N/A GO:0004491 ... B4E705 N/A
    1047586 9q0d:C (2.38) BS01 NAD N/A GO:0004491 ... B4E705 N/A
    1047587 9q0d:D (2.38) BS01 NAD N/A GO:0004491 ... B4E705 N/A
    1047588 9q0h:A (2.2) BS01 dna N/A GO:0004519 ... N/A N/A
    1047589 9q0h:A (2.2) BS02 dna N/A GO:0004519 ... N/A N/A
    1047590 9q0h:A (2.2) BS03 CA N/A GO:0004519 ... N/A N/A
    1047591 9q0h:A (2.2) BS04 CA N/A GO:0004519 ... N/A N/A
    1047592 9q0h:A (2.2) BS05 CA N/A GO:0004519 ... N/A N/A
    1047593 9q0s:A (2.46) BS01 A1CNG N/A N/A P00533 N/A
    1047594 9q0t:A (1.87) BS01 A1CNI N/A N/A P12497 41448052
    1047595 9q0t:B (1.87) BS01 A1CNI N/A N/A P12497 41448052
    1047596 9q0x:A (3.77) BS01 HEM N/A N/A N/A 41719409
    1047597 9q0x:A (3.77) BS02 HEM N/A N/A N/A 41719409
    1047598 9q0x:B (3.77) BS01 HEM N/A N/A N/A 41719409
    1047599 9q0x:B (3.77) BS02 HEM N/A N/A N/A 41719409
    1047600 9q0y:A (3.19) BS01 HEM N/A N/A N/A 41719409

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).