SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1048601 9q8x:F (2.94) BS01 dna N/A GO:0000781 ... P62805 41444611
    1048602 9q8x:F (2.94) BS02 dna N/A GO:0000781 ... P62805 41444611
    1048603 9q8x:G (2.94) BS01 dna N/A GO:0000077 ... P16104 41444611
    1048604 9q8x:G (2.94) BS02 dna N/A GO:0000077 ... P16104 41444611
    1048605 9q8x:H (2.94) BS01 dna N/A GO:0000786 ... P06899 41444611
    1048606 9q8x:H (2.94) BS02 dna N/A GO:0000786 ... P06899 41444611
    1048607 9q8x:K (2.94) BS01 dna N/A GO:0000723 ... P12956 41444611
    1048608 9q8x:K (2.94) BS02 dna N/A GO:0000723 ... P12956 41444611
    1048609 9q8x:L (2.94) BS01 dna N/A GO:0000723 ... P13010 41444611
    1048610 9q8x:L (2.94) BS02 dna N/A GO:0000723 ... P13010 41444611
    1048611 9q8x:M (2.94) BS01 dna N/A GO:0000723 ... P12956 41444611
    1048612 9q8x:M (2.94) BS02 dna N/A GO:0000723 ... P12956 41444611
    1048613 9q8x:N (2.94) BS01 dna N/A GO:0000723 ... P13010 41444611
    1048614 9q8x:N (2.94) BS02 dna N/A GO:0000723 ... P13010 41444611
    1048615 9q8y:C (2.63) BS01 ZN N/A N/A Q9H0F5 40763985
    1048616 9q8y:C (2.63) BS02 ZN N/A N/A Q9H0F5 40763985
    1048617 9q8y:D (2.63) BS01 ZN N/A N/A Q9H0F5 40763985
    1048618 9q8y:D (2.63) BS02 ZN N/A N/A Q9H0F5 40763985
    1048619 9q8z:B (3.0) BS01 UDP N/A N/A Q70JA7 41298522
    1048620 9q8z:B (3.0) BS02 MN N/A N/A Q70JA7 41298522
    1048621 9q8z:B (3.0) BS03 MN N/A N/A Q70JA7 41298522
    1048622 9q90:1 (3.5) BS01 dna N/A GO:0005524 ... P37344 N/A
    1048623 9q90:1 (3.5) BS02 ADP N/A GO:0005524 ... P37344 N/A
    1048624 9q90:2 (3.5) BS01 dna N/A GO:0005524 ... P37344 N/A
    1048625 9q90:2 (3.5) BS02 ADP N/A GO:0005524 ... P37344 N/A
    1048626 9q90:2 (3.5) BS03 AF3 N/A GO:0005524 ... P37344 N/A
    1048627 9q90:3 (3.5) BS01 ADP N/A GO:0005524 ... P37344 N/A
    1048628 9q90:3 (3.5) BS02 AF3 N/A GO:0005524 ... P37344 N/A
    1048629 9q90:4 (3.5) BS01 ADP N/A GO:0005524 ... P37344 N/A
    1048630 9q90:4 (3.5) BS02 AF3 N/A GO:0005524 ... P37344 N/A
    1048631 9q90:6 (3.5) BS01 ADP N/A GO:0005524 ... P37344 N/A
    1048632 9q90:M (3.5) BS01 dna N/A GO:0000976 ... B5XST9 N/A
    1048633 9q90:M (3.5) BS02 dna N/A GO:0000976 ... B5XST9 N/A
    1048634 9q91:M (7.2) BS01 dna N/A GO:0000976 ... B5XST9 40273105
    1048635 9q91:M (7.2) BS02 dna N/A GO:0000976 ... B5XST9 40273105
    1048636 9q92:1 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048637 9q92:2 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048638 9q92:2 (6.8) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048639 9q92:3 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048640 9q92:4 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048641 9q92:5 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048642 9q92:5 (6.8) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048643 9q92:M (6.8) BS01 dna N/A GO:0000976 ... A0A377VEN9 40273105
    1048644 9q92:M (6.8) BS02 dna N/A GO:0000976 ... A0A377VEN9 40273105
    1048645 9q93:1 (6.6) BS01 dna N/A GO:0005524 ... P37344 40273105
    1048646 9q93:1 (6.6) BS02 ADP N/A GO:0005524 ... P37344 40273105
    1048647 9q93:1 (6.6) BS03 AF3 N/A GO:0005524 ... P37344 40273105
    1048648 9q93:2 (6.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048649 9q93:3 (6.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048650 9q93:3 (6.6) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048651 9q93:4 (6.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048652 9q93:4 (6.6) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048653 9q93:5 (6.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048654 9q93:M (6.6) BS01 dna N/A GO:0000976 ... B5XST9 40273105
    1048655 9q93:M (6.6) BS02 dna N/A GO:0000976 ... B5XST9 40273105
    1048656 9q94:1 (5.8) BS01 dna N/A GO:0005524 ... P37344 40273105
    1048657 9q94:1 (5.8) BS02 ADP N/A GO:0005524 ... P37344 40273105
    1048658 9q94:2 (5.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048659 9q94:2 (5.8) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048660 9q94:3 (5.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048661 9q94:4 (5.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048662 9q94:5 (5.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048663 9q94:M (5.8) BS01 dna N/A GO:0000976 ... A0A0N9UTC1 40273105
    1048664 9q94:M (5.8) BS02 dna N/A GO:0000976 ... A0A0N9UTC1 40273105
    1048665 9q95:1 (6.8) BS01 dna N/A GO:0005524 ... P37344 40273105
    1048666 9q95:1 (6.8) BS02 ADP N/A GO:0005524 ... P37344 40273105
    1048667 9q95:1 (6.8) BS03 AF3 N/A GO:0005524 ... P37344 40273105
    1048668 9q95:2 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048669 9q95:2 (6.8) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048670 9q95:3 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048671 9q95:3 (6.8) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048672 9q95:4 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048673 9q95:5 (6.8) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048674 9q95:5 (6.8) BS02 MG N/A GO:0005524 ... P37344 40273105
    1048675 9q95:M (6.8) BS01 dna N/A GO:0000976 ... A0A0H3H3L1 40273105
    1048676 9q95:M (6.8) BS02 dna N/A GO:0000976 ... A0A0H3H3L1 40273105
    1048677 9q96:C (4.6) BS01 dna N/A GO:0000345 ... P0A8V2 40273105
    1048678 9q96:M (4.6) BS01 dna N/A GO:0000976 ... A0A377VEN9 40273105
    1048679 9q96:M (4.6) BS02 dna N/A GO:0000976 ... A0A377VEN9 40273105
    1048680 9q97:1 (4.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048681 9q97:2 (4.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048682 9q97:2 (4.6) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048683 9q97:3 (4.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048684 9q97:3 (4.6) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048685 9q97:4 (4.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048686 9q97:5 (4.6) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048687 9q97:M (4.6) BS01 dna N/A GO:0000976 ... A0A0N9UTC1 40273105
    1048688 9q97:M (4.6) BS02 dna N/A GO:0000976 ... A0A0N9UTC1 40273105
    1048689 9q98:1 (8.3) BS01 dna N/A GO:0005524 ... P37344 40273105
    1048690 9q98:1 (8.3) BS02 ADP N/A GO:0005524 ... P37344 40273105
    1048691 9q98:2 (8.3) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048692 9q98:3 (8.3) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048693 9q98:4 (8.3) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048694 9q98:4 (8.3) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048695 9q98:5 (8.3) BS01 ADP N/A GO:0005524 ... P37344 40273105
    1048696 9q98:5 (8.3) BS02 AF3 N/A GO:0005524 ... P37344 40273105
    1048697 9q98:M (8.3) BS01 dna N/A GO:0000976 ... A0A0H3H3L1 40273105
    1048698 9q98:M (8.3) BS02 dna N/A GO:0000976 ... A0A0H3H3L1 40273105
    1048699 9q9a:A (1.03) BS01 3NG N/A GO:0000785 ... P19784 N/A
    1048700 9q9a:A (1.03) BS02 A1I4V N/A GO:0000785 ... P19784 N/A
    1048701 9q9b:A (1.84) BS01 VN9 N/A GO:0000785 ... P19784 N/A
    1048702 9q9b:A (1.84) BS02 3NG N/A GO:0000785 ... P19784 N/A
    1048703 9q9c:A (1.66) BS01 R9D N/A GO:0000785 ... P19784 N/A
    1048704 9q9d:A (0.89) BS01 3NG N/A GO:0000785 ... P19784 N/A
    1048705 9q9d:A (0.89) BS02 R9G N/A GO:0000785 ... P19784 N/A
    1048706 9q9f:A (4.54) BS01 dna N/A GO:0000786 ... P68431 41444611
    1048707 9q9f:A (4.54) BS02 dna N/A GO:0000786 ... P68431 41444611
    1048708 9q9f:B (4.54) BS01 dna N/A GO:0000781 ... P62805 41444611
    1048709 9q9f:B (4.54) BS02 dna N/A GO:0000781 ... P62805 41444611
    1048710 9q9f:C (4.54) BS01 dna N/A GO:0000077 ... P16104 41444611
    1048711 9q9f:C (4.54) BS02 dna N/A GO:0000077 ... P16104 41444611
    1048712 9q9f:D (4.54) BS01 dna N/A GO:0000786 ... P06899 41444611
    1048713 9q9f:E (4.54) BS01 dna N/A GO:0000786 ... P68431 41444611
    1048714 9q9f:E (4.54) BS02 dna N/A GO:0000786 ... P68431 41444611
    1048715 9q9f:F (4.54) BS01 dna N/A GO:0000781 ... P62805 41444611
    1048716 9q9f:F (4.54) BS02 dna N/A GO:0000781 ... P62805 41444611
    1048717 9q9f:G (4.54) BS01 dna N/A GO:0000077 ... P16104 41444611
    1048718 9q9f:G (4.54) BS02 dna N/A GO:0000077 ... P16104 41444611
    1048719 9q9f:H (4.54) BS01 dna N/A GO:0000786 ... P06899 41444611
    1048720 9q9f:H (4.54) BS02 dna N/A GO:0000786 ... P06899 41444611
    1048721 9q9f:K (4.54) BS01 dna N/A GO:0000723 ... P12956 41444611
    1048722 9q9f:K (4.54) BS02 dna N/A GO:0000723 ... P12956 41444611
    1048723 9q9f:L (4.54) BS01 dna N/A GO:0000723 ... P13010 41444611
    1048724 9q9f:L (4.54) BS02 dna N/A GO:0000723 ... P13010 41444611
    1048725 9q9f:O (4.54) BS01 dna N/A GO:0000460 ... P78527 41444611
    1048726 9q9f:O (4.54) BS02 dna N/A GO:0000460 ... P78527 41444611
    1048727 9q9g:A (0.94) BS01 R9J N/A GO:0000785 ... P19784 N/A
    1048728 9q9g:A (0.94) BS02 R9J N/A GO:0000785 ... P19784 N/A
    1048729 9q9g:A (0.94) BS03 R9J N/A GO:0000785 ... P19784 N/A
    1048730 9q9h:A (3.11) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048731 9q9h:A (3.11) BS02 MG N/A GO:0000014 ... Q92878 40968163
    1048732 9q9h:A (3.11) BS03 ADP N/A GO:0000014 ... Q92878 40968163
    1048733 9q9h:A (3.11) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048734 9q9h:A (3.11) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048735 9q9h:A (3.11) BS06 BEF N/A GO:0000014 ... Q92878 40968163
    1048736 9q9h:B (3.11) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048737 9q9h:B (3.11) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048738 9q9h:B (3.11) BS03 ADP N/A GO:0000014 ... Q92878 40968163
    1048739 9q9h:B (3.11) BS04 MG N/A GO:0000014 ... Q92878 40968163
    1048740 9q9h:B (3.11) BS05 ADP N/A GO:0000014 ... Q92878 40968163
    1048741 9q9h:B (3.11) BS06 BEF N/A GO:0000014 ... Q92878 40968163
    1048742 9q9h:B (3.11) BS07 BEF N/A GO:0000014 ... Q92878 40968163
    1048743 9q9h:D (3.11) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048744 9q9h:D (3.11) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048745 9q9h:E (3.11) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048746 9q9h:E (3.11) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048747 9q9i:A (2.79) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048748 9q9i:A (2.79) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048749 9q9i:A (2.79) BS03 MG N/A GO:0000014 ... Q92878 40968163
    1048750 9q9i:A (2.79) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048751 9q9i:A (2.79) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048752 9q9i:A (2.79) BS06 BEF N/A GO:0000014 ... Q92878 40968163
    1048753 9q9i:A (2.79) BS07 ADP N/A GO:0000014 ... Q92878 40968163
    1048754 9q9i:B (2.79) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048755 9q9i:B (2.79) BS02 ADP N/A GO:0000014 ... Q92878 40968163
    1048756 9q9i:B (2.79) BS03 BEF N/A GO:0000014 ... Q92878 40968163
    1048757 9q9i:B (2.79) BS04 MG N/A GO:0000014 ... Q92878 40968163
    1048758 9q9i:B (2.79) BS05 ADP N/A GO:0000014 ... Q92878 40968163
    1048759 9q9i:D (2.79) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048760 9q9i:E (2.79) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048761 9q9j:A (2.71) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048762 9q9j:A (2.71) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048763 9q9j:A (2.71) BS03 MG N/A GO:0000014 ... Q92878 40968163
    1048764 9q9j:A (2.71) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048765 9q9j:A (2.71) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048766 9q9j:A (2.71) BS06 BEF N/A GO:0000014 ... Q92878 40968163
    1048767 9q9j:A (2.71) BS07 ADP N/A GO:0000014 ... Q92878 40968163
    1048768 9q9j:B (2.71) BS01 peptide N/A GO:0000014 ... Q92878 40968163
    1048769 9q9j:B (2.71) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048770 9q9j:B (2.71) BS03 dna N/A GO:0000014 ... Q92878 40968163
    1048771 9q9j:B (2.71) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048772 9q9j:B (2.71) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048773 9q9j:B (2.71) BS06 MG N/A GO:0000014 ... Q92878 40968163
    1048774 9q9j:B (2.71) BS07 ADP N/A GO:0000014 ... Q92878 40968163
    1048775 9q9j:D (2.71) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048776 9q9j:D (2.71) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048777 9q9j:E (2.71) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048778 9q9j:E (2.71) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048779 9q9k:A (2.59) BS01 peptide N/A GO:0000014 ... Q92878 40968163
    1048780 9q9k:A (2.59) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048781 9q9k:A (2.59) BS03 dna N/A GO:0000014 ... Q92878 40968163
    1048782 9q9k:A (2.59) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048783 9q9k:A (2.59) BS05 MG N/A GO:0000014 ... Q92878 40968163
    1048784 9q9k:A (2.59) BS06 ADP N/A GO:0000014 ... Q92878 40968163
    1048785 9q9k:A (2.59) BS07 BEF N/A GO:0000014 ... Q92878 40968163
    1048786 9q9k:B (2.59) BS01 peptide N/A GO:0000014 ... Q92878 40968163
    1048787 9q9k:B (2.59) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048788 9q9k:B (2.59) BS03 ADP N/A GO:0000014 ... Q92878 40968163
    1048789 9q9k:B (2.59) BS04 BEF N/A GO:0000014 ... Q92878 40968163
    1048790 9q9k:B (2.59) BS05 ADP N/A GO:0000014 ... Q92878 40968163
    1048791 9q9k:B (2.59) BS06 MG N/A GO:0000014 ... Q92878 40968163
    1048792 9q9k:B (2.59) BS07 BEF N/A GO:0000014 ... Q92878 40968163
    1048793 9q9k:D (2.59) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048794 9q9k:D (2.59) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048795 9q9k:E (2.59) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048796 9q9k:E (2.59) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048797 9q9m:A (2.81) BS01 dna N/A GO:0000014 ... Q92878 40968163
    1048798 9q9m:A (2.81) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048799 9q9m:A (2.81) BS03 MG N/A GO:0000014 ... Q92878 40968163
    1048800 9q9m:A (2.81) BS04 ADP N/A GO:0000014 ... Q92878 40968163

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).