SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1048801 9q9m:A (2.81) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048802 9q9m:A (2.81) BS06 BEF N/A GO:0000014 ... Q92878 40968163
    1048803 9q9m:A (2.81) BS07 ADP N/A GO:0000014 ... Q92878 40968163
    1048804 9q9m:B (2.81) BS01 peptide N/A GO:0000014 ... Q92878 40968163
    1048805 9q9m:B (2.81) BS02 dna N/A GO:0000014 ... Q92878 40968163
    1048806 9q9m:B (2.81) BS03 dna N/A GO:0000014 ... Q92878 40968163
    1048807 9q9m:B (2.81) BS04 ADP N/A GO:0000014 ... Q92878 40968163
    1048808 9q9m:B (2.81) BS05 BEF N/A GO:0000014 ... Q92878 40968163
    1048809 9q9m:B (2.81) BS06 MG N/A GO:0000014 ... Q92878 40968163
    1048810 9q9m:B (2.81) BS07 ADP N/A GO:0000014 ... Q92878 40968163
    1048811 9q9m:D (2.81) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048812 9q9m:D (2.81) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048813 9q9m:E (2.81) BS01 MN N/A GO:0000014 ... P49959 40968163
    1048814 9q9m:E (2.81) BS02 MN N/A GO:0000014 ... P49959 40968163
    1048815 9q9o:A (2.462) BS01 A1I4Z N/A N/A P19474 N/A
    1048816 9q9o:A (2.462) BS02 A1I4Z N/A N/A P19474 N/A
    1048817 9q9o:B (2.462) BS01 A1I4Z N/A N/A P19474 N/A
    1048818 9q9o:C (2.462) BS01 A1I4Z N/A N/A P19474 N/A
    1048819 9q9o:D (2.462) BS01 A1I4Z N/A N/A P19474 N/A
    1048820 9q9p:B (2.1) BS01 A1I4X N/A N/A P19474 N/A
    1048821 9q9q:A (2.253) BS01 A1I4Y N/A N/A P19474 N/A
    1048822 9q9q:B (2.253) BS01 A1I4Y N/A N/A P19474 N/A
    1048823 9q9r:B (2.331) BS01 A1I4W N/A N/A P19474 N/A
    1048824 9q9u:A (1.31) BS01 ZN N/A GO:0035821 ... Q9F0L7 N/A
    1048825 9q9z:A (3.9) BS01 ZN N/A GO:0004386 ... Q9P2E3 40876457
    1048826 9q9z:A (3.9) BS02 ZN N/A GO:0004386 ... Q9P2E3 40876457
    1048827 9q9z:A (3.9) BS03 ZN N/A GO:0004386 ... Q9P2E3 40876457
    1048828 9q9z:A (3.9) BS04 ZN N/A GO:0004386 ... Q9P2E3 40876457
    1048829 9q9z:A (3.9) BS05 ZN N/A GO:0004386 ... Q9P2E3 40876457
    1048830 9qa0:A (2.2) BS01 peptide N/A GO:0006508 ... Q10714 40305366
    1048831 9qa0:A (2.2) BS02 peptide N/A GO:0006508 ... Q10714 40305366
    1048832 9qa0:A (2.2) BS03 ZN N/A GO:0006508 ... Q10714 40305366
    1048833 9qa1:A (2.2) BS01 peptide N/A GO:0005515 ... Q10714 40305366
    1048834 9qa1:A (2.2) BS02 peptide N/A GO:0005515 ... Q10714 40305366
    1048835 9qa1:A (2.2) BS03 ZN N/A GO:0005515 ... Q10714 40305366
    1048836 9qa2:A (1.9) BS01 peptide N/A GO:0006508 ... Q10714 40305366
    1048837 9qa2:A (1.9) BS02 peptide N/A GO:0006508 ... Q10714 40305366
    1048838 9qa2:A (1.9) BS03 ZN N/A GO:0006508 ... Q10714 40305366
    1048839 9qa3:A (2.2) BS01 peptide N/A GO:0005515 ... Q10714 40305366
    1048840 9qa3:A (2.2) BS02 peptide N/A GO:0005515 ... Q10714 40305366
    1048841 9qa3:A (2.2) BS03 ZN N/A GO:0005515 ... Q10714 40305366
    1048842 9qa4:A (1.85) BS01 peptide N/A GO:0006508 ... Q10714 40305366
    1048843 9qa4:A (1.85) BS02 peptide N/A GO:0006508 ... Q10714 40305366
    1048844 9qa4:A (1.85) BS03 ZN N/A GO:0006508 ... Q10714 40305366
    1048845 9qa5:A (2.08) BS01 peptide N/A N/A Q06124 41435833
    1048846 9qa6:A (2.81) BS01 ZN N/A GO:0008237 ... Q9AES2 40627637
    1048847 9qa6:A (2.81) BS02 ZN N/A GO:0008237 ... Q9AES2 40627637
    1048848 9qa6:A (2.81) BS03 ZN N/A GO:0008237 ... Q9AES2 40627637
    1048849 9qa6:A (2.81) BS04 AZI N/A GO:0008237 ... Q9AES2 40627637
    1048850 9qa6:A (2.81) BS05 AZI N/A GO:0008237 ... Q9AES2 40627637
    1048851 9qa6:A (2.81) BS06 AZI N/A GO:0008237 ... Q9AES2 40627637
    1048852 9qa7:A (3.41) BS01 FES N/A N/A N/A N/A
    1048853 9qa7:B (3.41) BS01 FES N/A N/A N/A N/A
    1048854 9qab:A (0.95) BS01 RA7 N/A GO:0000785 ... P19784 N/A
    1048855 9qab:A (0.95) BS02 3NG N/A GO:0000785 ... P19784 N/A
    1048856 9qab:A (0.95) BS03 RA7 N/A GO:0000785 ... P19784 N/A
    1048857 9qac:A (2.07) BS01 A1I5P N/A GO:0006338 ... P51531 40529061
    1048858 9qac:B (2.07) BS01 A1I5P N/A GO:0006338 ... P51531 40529061
    1048859 9qac:C (2.07) BS01 A1I5P N/A GO:0006338 ... P51531 40529061
    1048860 9qad:A (2.08) BS01 A1I45 N/A GO:0006338 ... P51531 40529061
    1048861 9qad:B (2.08) BS01 A1I45 N/A GO:0006338 ... P51531 40529061
    1048862 9qad:C (2.08) BS01 A1I45 N/A GO:0006338 ... P51531 40529061
    1048863 9qaf:G (2.8) BS01 MG N/A GO:0003674 ... P21243 41033310
    1048864 9qaf:I (2.8) BS01 MG N/A GO:0005515 ... P25451 41033310
    1048865 9qaf:K (2.8) BS01 MG N/A GO:0004298 ... P30656 41033310
    1048866 9qaf:N (2.8) BS01 MG N/A GO:0004175 ... P38624 41033310
    1048867 9qaf:V (2.8) BS01 MG N/A GO:0004298 ... P25043 41033310
    1048868 9qaf:W (2.8) BS01 MG N/A GO:0005515 ... P25451 41033310
    1048869 9qaf:Y (2.8) BS01 MG N/A GO:0004298 ... P30656 41033310
    1048870 9qaf:Z (2.8) BS01 MG N/A GO:0003674 ... P23724 41033310
    1048871 9qag:A (1.01) BS01 3NG N/A GO:0000785 ... P19784 N/A
    1048872 9qag:A (1.01) BS02 RBJ N/A GO:0000785 ... P19784 N/A
    1048873 9qai:G (2.8) BS01 MG N/A GO:0003674 ... P21243 41033310
    1048874 9qai:H (2.8) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1048875 9qai:K (2.8) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1048876 9qai:K (2.8) BS02 MG N/A GO:0004298 ... P30656 41033310
    1048877 9qai:M (2.8) BS01 MG N/A GO:0003674 ... P30657 41033310
    1048878 9qai:N (2.8) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1048879 9qai:N (2.8) BS02 MG N/A GO:0004175 ... P38624 41033310
    1048880 9qai:V (2.8) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1048881 9qai:V (2.8) BS02 MG N/A GO:0004298 ... P25043 41033310
    1048882 9qai:Y (2.8) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1048883 9qai:Y (2.8) BS02 MG N/A GO:0004298 ... P30656 41033310
    1048884 9qai:Z (2.8) BS01 MG N/A GO:0003674 ... P23724 41033310
    1048885 9qai:b (2.8) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1048886 9qaj:A (2.95) BS01 dna N/A GO:0000786 ... P84233 40207634
    1048887 9qaj:A (2.95) BS02 dna N/A GO:0000786 ... P84233 40207634
    1048888 9qaj:B (2.95) BS01 dna N/A GO:0000786 ... P62799 40207634
    1048889 9qaj:B (2.95) BS02 dna N/A GO:0000786 ... P62799 40207634
    1048890 9qaj:C (2.95) BS01 dna N/A GO:0000786 ... Q6AZJ8 40207634
    1048891 9qaj:C (2.95) BS02 dna N/A GO:0000786 ... Q6AZJ8 40207634
    1048892 9qaj:C (2.95) BS03 peptide N/A GO:0000786 ... Q6AZJ8 40207634
    1048893 9qaj:C (2.95) BS04 peptide N/A GO:0000786 ... Q6AZJ8 40207634
    1048894 9qaj:D (2.95) BS01 dna N/A GO:0000786 ... P02281 40207634
    1048895 9qaj:D (2.95) BS02 dna N/A GO:0000786 ... P02281 40207634
    1048896 9qaj:D (2.95) BS03 peptide N/A GO:0000786 ... P02281 40207634
    1048897 9qaj:D (2.95) BS04 peptide N/A GO:0000786 ... P02281 40207634
    1048898 9qaj:E (2.95) BS01 dna N/A GO:0000786 ... P84233 40207634
    1048899 9qaj:E (2.95) BS02 dna N/A GO:0000786 ... P84233 40207634
    1048900 9qaj:F (2.95) BS01 dna N/A GO:0000786 ... P62799 40207634
    1048901 9qaj:F (2.95) BS02 dna N/A GO:0000786 ... P62799 40207634
    1048902 9qaj:G (2.95) BS01 dna N/A GO:0000786 ... Q6AZJ8 40207634
    1048903 9qaj:G (2.95) BS02 dna N/A GO:0000786 ... Q6AZJ8 40207634
    1048904 9qaj:G (2.95) BS03 peptide N/A GO:0000786 ... Q6AZJ8 40207634
    1048905 9qaj:G (2.95) BS04 peptide N/A GO:0000786 ... Q6AZJ8 40207634
    1048906 9qaj:H (2.95) BS01 dna N/A GO:0000786 ... P02281 40207634
    1048907 9qaj:H (2.95) BS02 dna N/A GO:0000786 ... P02281 40207634
    1048908 9qaj:H (2.95) BS03 peptide N/A GO:0000786 ... P02281 40207634
    1048909 9qak:A (0.98) BS01 A1I5I N/A GO:0000785 ... P19784 N/A
    1048910 9qal:A (-1.00) BS01 ZN N/A N/A Q6ZSG1 N/A
    1048911 9qal:A (-1.00) BS02 ZN N/A N/A Q6ZSG1 N/A
    1048912 9qam:A (1.85) BS01 FUC N/A GO:0006508 ... P12821 41112194
    1048913 9qam:A (1.85) BS02 ZN N/A GO:0006508 ... P12821 41112194
    1048914 9qam:A (1.85) BS03 NXA N/A GO:0006508 ... P12821 41112194
    1048915 9qam:A (1.85) BS04 CPF N/A GO:0006508 ... P12821 41112194
    1048916 9qam:A (1.85) BS05 CPF N/A GO:0006508 ... P12821 41112194
    1048917 9qan:A (1.5) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048918 9qan:A (1.5) BS02 X92 N/A GO:0006508 ... P12821 40824896
    1048919 9qan:A (1.5) BS03 ZN N/A GO:0006508 ... P12821 40824896
    1048920 9qao:A (2.3) BS01 MAN N/A GO:0006508 ... P12821 40824896
    1048921 9qao:A (2.3) BS02 FUC N/A GO:0006508 ... P12821 40824896
    1048922 9qao:A (2.3) BS03 ZN N/A GO:0006508 ... P12821 40824896
    1048923 9qao:A (2.3) BS04 X93 N/A GO:0006508 ... P12821 40824896
    1048924 9qap:A (1.5) BS01 MAN N/A GO:0006508 ... P12821 40824896
    1048925 9qap:A (1.5) BS02 ZN N/A GO:0006508 ... P12821 40824896
    1048926 9qap:A (1.5) BS03 A1I5A N/A GO:0006508 ... P12821 40824896
    1048927 9qaq:A (1.9) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048928 9qaq:A (1.9) BS02 ZN N/A GO:0006508 ... P12821 40824896
    1048929 9qaq:A (1.9) BS03 X94 N/A GO:0006508 ... P12821 40824896
    1048930 9qar:A (2.0) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048931 9qar:A (2.0) BS02 X92 N/A GO:0006508 ... P12821 40824896
    1048932 9qar:A (2.0) BS03 MG N/A GO:0006508 ... P12821 40824896
    1048933 9qar:A (2.0) BS04 CA N/A GO:0006508 ... P12821 40824896
    1048934 9qar:B (2.0) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048935 9qar:B (2.0) BS02 X92 N/A GO:0006508 ... P12821 40824896
    1048936 9qar:B (2.0) BS03 MG N/A GO:0006508 ... P12821 40824896
    1048937 9qas:A (2.2) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048938 9qas:A (2.2) BS02 X93 N/A GO:0006508 ... P12821 40824896
    1048939 9qas:A (2.2) BS03 ZN N/A GO:0006508 ... P12821 40824896
    1048940 9qas:A (2.2) BS04 CA N/A GO:0006508 ... P12821 40824896
    1048941 9qas:A (2.2) BS05 CA N/A GO:0006508 ... P12821 40824896
    1048942 9qas:B (2.2) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048943 9qas:B (2.2) BS02 X93 N/A GO:0006508 ... P12821 40824896
    1048944 9qas:B (2.2) BS03 ZN N/A GO:0006508 ... P12821 40824896
    1048945 9qas:B (2.2) BS04 CA N/A GO:0006508 ... P12821 40824896
    1048946 9qat:A (2.2) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048947 9qat:A (2.2) BS02 A1I5A N/A GO:0006508 ... P12821 40824896
    1048948 9qat:B (2.2) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048949 9qat:B (2.2) BS02 ZN N/A GO:0006508 ... P12821 40824896
    1048950 9qat:B (2.2) BS03 CA N/A GO:0006508 ... P12821 40824896
    1048951 9qat:B (2.2) BS04 A1I5A N/A GO:0006508 ... P12821 40824896
    1048952 9qau:A (2.0) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048953 9qau:A (2.0) BS02 X94 N/A GO:0006508 ... P12821 40824896
    1048954 9qau:B (2.0) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048955 9qau:B (2.0) BS02 X94 N/A GO:0006508 ... P12821 40824896
    1048956 9qav:A (2.3) BS01 ZN N/A GO:0006508 ... P12821 40824896
    1048957 9qav:A (2.3) BS02 EAL N/A GO:0006508 ... P12821 40824896
    1048958 9qav:B (2.3) BS01 FUC N/A GO:0006508 ... P12821 40824896
    1048959 9qav:B (2.3) BS02 ZN N/A GO:0006508 ... P12821 40824896
    1048960 9qav:B (2.3) BS03 EAL N/A GO:0006508 ... P12821 40824896
    1048961 9qav:B (2.3) BS04 CA N/A GO:0006508 ... P12821 40824896
    1048962 9qaw:A (3.34) BS01 peptide N/A N/A P98164 N/A
    1048963 9qaw:A (3.34) BS02 peptide N/A N/A P98164 N/A
    1048964 9qaw:A (3.34) BS03 peptide N/A N/A P98164 N/A
    1048965 9qaw:A (3.34) BS04 peptide N/A N/A P98164 N/A
    1048966 9qaw:A (3.34) BS05 CA N/A N/A P98164 N/A
    1048967 9qaw:A (3.34) BS06 CA N/A N/A P98164 N/A
    1048968 9qaw:A (3.34) BS07 CA N/A N/A P98164 N/A
    1048969 9qaw:A (3.34) BS08 CA N/A N/A P98164 N/A
    1048970 9qaw:A (3.34) BS09 CA N/A N/A P98164 N/A
    1048971 9qaw:A (3.34) BS10 CA N/A N/A P98164 N/A
    1048972 9qaw:A (3.34) BS11 CA N/A N/A P98164 N/A
    1048973 9qaw:A (3.34) BS12 CA N/A N/A P98164 N/A
    1048974 9qaw:A (3.34) BS13 CA N/A N/A P98164 N/A
    1048975 9qaw:A (3.34) BS14 CA N/A N/A P98164 N/A
    1048976 9qaw:A (3.34) BS15 CA N/A N/A P98164 N/A
    1048977 9qaw:A (3.34) BS16 CA N/A N/A P98164 N/A
    1048978 9qaw:B (3.34) BS01 peptide N/A N/A P98164 N/A
    1048979 9qaw:B (3.34) BS02 peptide N/A N/A P98164 N/A
    1048980 9qaw:B (3.34) BS03 CA N/A N/A P98164 N/A
    1048981 9qaw:B (3.34) BS04 CA N/A N/A P98164 N/A
    1048982 9qaw:B (3.34) BS05 CA N/A N/A P98164 N/A
    1048983 9qaw:B (3.34) BS06 CA N/A N/A P98164 N/A
    1048984 9qaw:B (3.34) BS07 CA N/A N/A P98164 N/A
    1048985 9qaw:B (3.34) BS08 CA N/A N/A P98164 N/A
    1048986 9qaw:B (3.34) BS09 CA N/A N/A P98164 N/A
    1048987 9qaw:B (3.34) BS10 CA N/A N/A P98164 N/A
    1048988 9qaw:B (3.34) BS11 CA N/A N/A P98164 N/A
    1048989 9qaw:B (3.34) BS12 CA N/A N/A P98164 N/A
    1048990 9qaw:B (3.34) BS13 CA N/A N/A P98164 N/A
    1048991 9qaw:B (3.34) BS14 CA N/A N/A P98164 N/A
    1048992 9qaw:B (3.34) BS15 CA N/A N/A P98164 N/A
    1048993 9qax:A (3.3) BS01 rna N/A GO:0000049 ... O14746 40638752
    1048994 9qax:A (3.3) BS02 dna N/A GO:0000049 ... O14746 40638752
    1048995 9qax:L (3.3) BS01 rna N/A GO:0000786 ... B2R5B3 40638752
    1048996 9qax:M (3.3) BS01 rna N/A GO:0000786 ... B4DR52 40638752
    1048997 9qay:A (3.8) BS01 rna N/A GO:0000049 ... O14746 40638752
    1048998 9qay:A (3.8) BS02 dna N/A GO:0000049 ... O14746 40638752
    1048999 9qay:L (3.8) BS01 rna N/A GO:0000786 ... B2R5B3 40638752
    1049000 9qay:M (3.8) BS01 rna N/A GO:0000786 ... B4DR52 40638752

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).